Gcaud2907.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2907.t1
Unique NameGcaud2907.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length344
Homology
BLAST of Gcaud2907.t1 vs. uniprot
Match: A0A2V3IYL8_9FLOR (Acyl-protein thioesterase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYL8_9FLOR)

HSP 1 Score: 347 bits (890), Expect = 1.700e-115
Identity = 177/338 (52.37%), Postives = 228/338 (67.46%), Query Frame = 0
Query:    7 LFLAAVLLAAHLSLVAAFDPLDIISQLFPCTALRLSRPPWTTTYFEPSLLPLSAQNVTQERIEELVAGENFTCGGMIPITGHTLLCSPQGFTFVPPRPARFALIFLHGIVPPDNEASMVPILSRLLATDPELGSQIRIDFPLVQFRQITFSNFMSPPVTVARAYFDLLPPPASPSLADVIAADNDRLGLFRAAQFVDFTVRSQMCKASIPTSRVAVMGHSLGAFTALETVMSTGLDLAGAVAISGSLPRAGDYLRSDVQAFDTRRRDFNLTMIHATGDDVVPFVFGNLSAQILQPVFTSLGGGFSFESLEGLDHFNQLFDDAQ-VYTLIVRALRQAFL 343
            L LA  LL  H +  +AF    ++   FPC ALR+S+P WTTTYFEPSLLP SAQN T E +  L    NF+C   +P T HTL CS  G+T VP    ++A+IFL G+     EA+ +PI   ++  DP +  ++ I +PL+ FR ITFS F  PP+T+ RA+FDLLPPP S +  D++AA  DRLGL+RAAQ +DF  R+Q C   IPT RVA++GHSLG F  LETVMST L  A A+ +SG LPR GDYLR +   ++  RR +NLTM+HAT DDV+PF FGN SAQILQP+FTSLGGGF F + +G DHF+++F   + +Y LI  ALR  F+
Sbjct:    9 LALATTLLTFHNT--SAFSVKRLLEAYFPCAALRISQPDWTTTYFEPSLLPSSAQNSTLEELAALARDRNFSCFEKVPGTNHTLQCSTSGYTLVPATRPKYAVIFLAGLYRKGFEAAALPIFPLIIQQDPTMFDELIIHYPLIPFRTITFSQFTEPPLTIGRAWFDLLPPPRSTAPEDLLAAQFDRLGLYRAAQRIDFITRAQHCLHGIPTDRVALLGHSLGGFALLETVMSTDLSPAAAITVSGILPRVGDYLRPNTLPYNPSRRSYNLTMVHATEDDVIPFQFGNASAQILQPLFTSLGGGFRFVAPQGFDHFSKIFFQYEGLYPLIAEALRNGFI 344          
BLAST of Gcaud2907.t1 vs. uniprot
Match: A0A2V3IXF0_9FLOR (Acyl-protein thioesterase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXF0_9FLOR)

HSP 1 Score: 345 bits (886), Expect = 6.850e-115
Identity = 175/343 (51.02%), Postives = 234/343 (68.22%), Query Frame = 0
Query:    2 SPHPSLFLAAV-LLAAHLSLVAAFDPLDIISQLFPCTALRLSRPPWTTTYFEPSLLPLSAQNVTQERIEELVAGENFTCGGMIPITGHTLLCSPQGFTFVPPRPARFALIFLHGIVPPDNEASMVPILSRLLATDPELGSQIRIDFPLVQFRQITFSNFMSPPVTVARAYFDLLPPPASPSLADVIAADNDRLGLFRAAQFVDFTVRSQMCKASIPTSRVAVMGHSLGAFTALETVMSTGLDLAGAVAISGSLPRAGDYLRSDVQAFDTRRRDFNLTMIHATGDDVVPFVFGNLSAQILQPVFTSLGGGFSFESLEGLDHFNQLFDDAQVYTLIVRALRQAFL 343
            SP     LA V LL+ H +  +AF    ++   FPC AL +S+P WTTTYFEPSL+P S QN T + +  L    N +C   +P T HTL CS  G+TFVP +  ++ALI++ G+V    E   +PI  R++  DP L   + I +PL+ FR ITF +F+SPP+T+ RA+FD+LPP AS S +D+ +A+ DRLGL+RAAQ +DF  R+Q C   IP +RVA++GHSLGA   LETV+ST ++ A A+A+SG LPRAGDY R D   ++  RR +NLTM+H T D VVPF  GN SAQI++PVFTSLGGGF F +L+GLDH  +LF+D QVY++I  ALR  F+
Sbjct:    4 SPSVIFVLATVFLLSCHNT--SAFSVKQLLETYFPCVALDISQPDWTTTYFEPSLVPPSVQNSTLDELSALARDNNISCFQRLPGTTHTLQCSTTGYTFVPAKRPKYALIYIAGLVRKGFEGRTLPIFRRIIQEDPNLTQHVIIHYPLIPFRSITFDSFVSPPLTIGRAWFDVLPPAASTSPSDLQSAEYDRLGLYRAAQKIDFITRAQNCLHGIPPNRVALLGHSLGALALLETVLSTDINPAAAIAVSGVLPRAGDYFRQDTLPYNPSRRSYNLTMVHGTEDKVVPFFSGNASAQIVRPVFTSLGGGFRFHALQGLDHLFKLFEDDQVYSIIREALRNGFM 344          
BLAST of Gcaud2907.t1 vs. uniprot
Match: UPI00037BA0F4 (hypothetical protein n=1 Tax=Methyloversatilis thermotolerans TaxID=1346290 RepID=UPI00037BA0F4)

HSP 1 Score: 60.5 bits (145), Expect = 4.890e-7
Identity = 58/184 (31.52%), Postives = 81/184 (44.02%), Query Frame = 0
Query:  104 PARFALIFLHGIVPPDNEASMVPILSRLLATDPELGSQIRIDFPLVQFRQITFSNFMSPPVTVARAYFDLLPPPASPSLADVIAADNDRLGLFRAAQFVDFTVRSQMCKASIPTSRVAVMGHSLGAFTALETVMSTGLDLAGAVAISGSLPRAGDYLRSDVQAFDTRRRDFNLTMIHATGDDVV 287
            P R +LI LHG+     +   VP+  RL     E    +R   P    R +T +        + RA+FDL  P           AD + +   RA+Q +   +  +     IP SR+A+MG S G   AL   +     LAG VA+SG LPRAG  L ++    +   RD  + M H   D VV
Sbjct:   16 PVRASLIVLHGLGADGGD--FVPVCRRL---GLESVGPVRCVLPHAPERPVTRNGGY-----LMRAWFDLYAP----------GADQENMDDVRASQVLIDGLIDREITRGIPASRIALMGFSQGCAMALYAGLRHPQRLAGIVALSGYLPRAG-VLAAEASLAN---RDLPVFMAHGRHDSVV 175          
BLAST of Gcaud2907.t1 vs. uniprot
Match: A0A7S4G7E6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G7E6_9EUGL)

HSP 1 Score: 55.1 bits (131), Expect = 6.570e-6
Identity = 42/107 (39.25%), Postives = 51/107 (47.66%), Query Frame = 0
Query:  215 IPTSRVAVMGHSLGAFTALETVMSTGLDLAGAVAISGSLPRAGDYL-RSDVQAFDTRRRDFNLTMIHATGDDVVPFVFGNLSAQILQPVFTSLGGGFSFESLEGLDH 320
            IP SRV V G S G   +L    S    LAG +A+S  LPRAG ++  +  +AF T        M H   D+VV F +G  S   LQ    S G    F S EGL H
Sbjct:    5 IPPSRVVVGGFSQGGAVSLYGGYSYDAGLAGILALSTWLPRAGQFVDEATEEAFGTP-----FLMCHGQSDEVVQFAYGERSFAALQ----SSGRNGQFRSFEGLGH 102          
The following BLAST results are available for this feature:
BLAST of Gcaud2907.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IYL8_9FLOR1.700e-11552.37Acyl-protein thioesterase 1 n=1 Tax=Gracilariopsis... [more]
A0A2V3IXF0_9FLOR6.850e-11551.02Acyl-protein thioesterase 1 n=1 Tax=Gracilariopsis... [more]
UPI00037BA0F44.890e-731.52hypothetical protein n=1 Tax=Methyloversatilis the... [more]
A0A7S4G7E6_9EUGL6.570e-639.25Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003140Phospholipase/carboxylesterase/thioesterasePFAMPF02230Abhydrolase_2coord: 197..320
e-value: 1.0E-10
score: 41.8
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820alpha/beta hydrolasecoord: 89..338
e-value: 7.1E-24
score: 86.6
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 97..338
NoneNo IPR availablePANTHERPTHR10655LYSOPHOSPHOLIPASE-RELATEDcoord: 98..320
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..343
NoneNo IPR availableTMHMMTMhelixcoord: 7..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_18_length_79438_cov_4.566121contigNODE_18_length_79438_cov_4.566121:40763..41794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2907.t1Gcaud2907.t1Gracilaria caudata M_176_S67 malemRNANODE_18_length_79438_cov_4.566121 40763..41794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2907.t1 ID=Gcaud2907.t1|Name=Gcaud2907.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=344bp
MSPHPSLFLAAVLLAAHLSLVAAFDPLDIISQLFPCTALRLSRPPWTTTY
FEPSLLPLSAQNVTQERIEELVAGENFTCGGMIPITGHTLLCSPQGFTFV
PPRPARFALIFLHGIVPPDNEASMVPILSRLLATDPELGSQIRIDFPLVQ
FRQITFSNFMSPPVTVARAYFDLLPPPASPSLADVIAADNDRLGLFRAAQ
FVDFTVRSQMCKASIPTSRVAVMGHSLGAFTALETVMSTGLDLAGAVAIS
GSLPRAGDYLRSDVQAFDTRRRDFNLTMIHATGDDVVPFVFGNLSAQILQ
PVFTSLGGGFSFESLEGLDHFNQLFDDAQVYTLIVRALRQAFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003140PLipase/COase/thioEstase
IPR029058AB_hydrolase