Gcaud2732.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2732.t1
Unique NameGcaud2732.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length480
Homology
BLAST of Gcaud2732.t1 vs. uniprot
Match: A0A2V3II28_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II28_9FLOR)

HSP 1 Score: 474 bits (1221), Expect = 2.090e-161
Identity = 256/482 (53.11%), Postives = 332/482 (68.88%), Query Frame = 0
Query:    1 MILIPFGNGVVAAFIFLVFEILVFPLLFYVTSKIASLLLYWSALKGIVVLVDSMKFPLWSEGLTRHQLSHVPLLAVRVILLAIPVYLETTLSSRDVPQMVSRTVENAFIPEPADDWFSYQNRSGEDIDPLRHVGERIFFSCTSMDEEGWVWARVANITYLP-NDRLRIRCVSDTEKAVYRLTEKVVNVGSENARDFLAVRISWTEGRVKDFPQPLVVQKNLWEEPHPNETAYRIHSVRALNDSAMQCFFEDSVKTSSVFGTKASGEE---LRGWCQKEEKTKEETKGVAFYVLKLDMAQLEDGSVT------GTCGGSCKLSTRNRSIVAVIEYRGSFEFKDKVLLGAKHMANMQPKWTSTARAMDIARFVLYSKMTNVTVNIRSGNVKAMTEVEAKAIITGAFEVVFVLVCALVLACEWRRKWRHVQQPNTVNGLSKCWAEAEENWGGVGSK---WISLSLPTSGSEGDSLPGFEPCRTKR 469
            M+++PF +GVV+A +FL FEI+VFPLLFY TS +ASL LY +A KG  V++D MKFPLWSEGL+RHQ SH  LLA+R++L+AIPVYLETTL SR+ P+MVSRTV +AF+P+P DDW++YQ RSGE ID LR  G   F +CTS+DE+GWVWA+VAN TY+  +D  +IRCVS+TE+ +Y LTE  V  G  N +  L + +SWTEGRV DFPQ LV++     E  P ETA+R+H+  ALND+A++C+F  +V+T   F    +G      RGWCQKEE       GVAFY L ++M QL   +++      G CG SCKL +RN + V  I YRGSF+FKDKVLLGAKH+AN  P + S+ RA DIA+ +LYSK +NVTV   SG     TE+E +AII    E+V VL+ AL+L+C    KW H+QQPNTV+GLS CWAE+++      +K   WI L L  +GSEG+    F    T R
Sbjct:    1 MVVVPFSSGVVSALLFLAFEIIVFPLLFYSTSILASLFLYRNARKGNDVVIDKMKFPLWSEGLSRHQTSHYSLLAIRIVLIAIPVYLETTLESREEPEMVSRTVTHAFVPQPTDDWYTYQIRSGEHIDSLRRTGLNTFLACTSVDEKGWVWAKVANFTYIQEHDAHQIRCVSNTEQPIYSLTEATVKYGPGNVQ-LLKMSVSWTEGRVADFPQALVLKDRFGREAPPGETAFRVHNAVALNDTAVKCYFPQTVRTR--FSKSRNGHPHTAWRGWCQKEEPI-----GVAFYSLLVNMDQLPMHNLSYETRERGRCGSSCKLRSRNATTVLEIVYRGSFQFKDKVLLGAKHLANYIPDYDSSLRASDIAQCILYSKASNVTVLTLSGRTLPRTEIEGRAIIIAISEIVVVLLFALMLSCARLSKWGHIQQPNTVSGLSNCWAESQKALSHQRTKEGKWIKLRLRRTGSEGEGPLRFTTSETMR 474          
BLAST of Gcaud2732.t1 vs. uniprot
Match: A0A2V3II21_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II21_9FLOR)

HSP 1 Score: 169 bits (429), Expect = 8.760e-44
Identity = 135/428 (31.54%), Postives = 203/428 (47.43%), Query Frame = 0
Query:   46 GIVVLVDSMKFPLWSEGLTRHQLSHVPLLAVRVILLAIPVYLETTLSSRDVPQMVSRTVENAFIPEPADDWFSYQNRSGEDIDPLRHV--GERIFFSCTSMDEEGWVWARVANITYLPNDRLRIRCVSDTEKAVYRLTEK---------VVNVGSENA----RDFLAVRISWTEGRVKDF-PQPLVVQKNLWEEPHPNETAYRIHSVRALNDSAMQCFF-EDSVKTSSVFGTKASGEELRGWCQKEEKTKEETKG-VAFYVLKLDMAQLEDGSVTGTCGGSCKLSTRNRSIVAVIEYRGSFEFKDKVLLGAKHMANMQPKWTSTARAMDIA--RFVLYSKMTNVTVNIRSGNVKAMTEVEAKAIITGAFEVVFVLVCALVLACEWRRKWRHVQQPNTVNGLSKCWAEAEEN-WGGVGSKW---ISLSL 449
            G  + V S+ +PLW+EGL   Q SH+ L  +R+  + IPVYLET   S   P  V + + NA++ +P  ++        E  DP   V   E +F  C + D++GWV A++AN+T +  DR  I CV  TE+AVYR  EK         VVN  S+      +  L + +   EG  K F P P V      E+  PN    ++ +V  L+    QCFF    V     F  +   + +  +       +  T   V FY   +     E  +     GG+  L ++   +    E+ GS E+K+++++ A H++  Q ++  T R   +   R +LYS+ +NVTV +         E++   I+ GA EV+ VLV  L LA   R KW  +Q+ NTV GLS  WA  +   W  + SK    ISL L
Sbjct:    2 GKSIRVRSIPYPLWNEGLFHRQPSHLLLFLIRIACIVIPVYLETRFISHSNPIPVKKLIRNAYVSQP--NYHDVHPLWSEQRDPRNVVLLPEEVFHRCAARDDDGWVIAKIANVTLVGKDRDLIHCVKGTEQAVYRTVEKTPHFVESSVVVNDQSKEKTFVYQPNLTLEVWRDEGPFKRFSPWPSV------EDDDPNRQYLQVKNVTVLDTKDFQCFFWRAPVAEGHAFDRE---DRIYEYVLDSFVCQNVTGNFVDFYFTSVQDLANESNTRILEQGGN--LVSKQSIVSTTFEFIGSLEYKNEIIINAGHLSRHQFRFPPTTRFQFLLMIRAILYSRASNVTVEVPGDEKTRSVELDVVVIVVGAMEVIVVLVLGLTLAVISRYKWDDMQRANTVEGLSHIWAMTQSRTWWDLSSKKNGPISLRL 416          
The following BLAST results are available for this feature:
BLAST of Gcaud2732.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3II28_9FLOR2.090e-16153.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II21_9FLOR8.760e-4431.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..479
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 388..408
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..387
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 409..479
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..56
NoneNo IPR availableTMHMMTMhelixcoord: 388..410
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_835_length_17303_cov_4.798745contigNODE_835_length_17303_cov_4.798745:2014..3453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2732.t1Gcaud2732.t1Gracilaria caudata M_176_S67 malemRNANODE_835_length_17303_cov_4.798745 2014..3453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2732.t1 ID=Gcaud2732.t1|Name=Gcaud2732.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=480bp
MILIPFGNGVVAAFIFLVFEILVFPLLFYVTSKIASLLLYWSALKGIVVL
VDSMKFPLWSEGLTRHQLSHVPLLAVRVILLAIPVYLETTLSSRDVPQMV
SRTVENAFIPEPADDWFSYQNRSGEDIDPLRHVGERIFFSCTSMDEEGWV
WARVANITYLPNDRLRIRCVSDTEKAVYRLTEKVVNVGSENARDFLAVRI
SWTEGRVKDFPQPLVVQKNLWEEPHPNETAYRIHSVRALNDSAMQCFFED
SVKTSSVFGTKASGEELRGWCQKEEKTKEETKGVAFYVLKLDMAQLEDGS
VTGTCGGSCKLSTRNRSIVAVIEYRGSFEFKDKVLLGAKHMANMQPKWTS
TARAMDIARFVLYSKMTNVTVNIRSGNVKAMTEVEAKAIITGAFEVVFVL
VCALVLACEWRRKWRHVQQPNTVNGLSKCWAEAEENWGGVGSKWISLSLP
TSGSEGDSLPGFEPCRTKRESASQTRNGS*
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