Gcaud2429.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2429.t1 vs. uniprot
Match: A0A2V3J6Q0_9FLOR (DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Q0_9FLOR) HSP 1 Score: 133 bits (335), Expect = 2.020e-37 Identity = 62/79 (78.48%), Postives = 71/79 (89.87%), Query Frame = 0
Query: 1 MSSETSSEPKVEVIGTDQTNQTFVLRDEDHTLGNALRYVLVKNPDVKFCGYSIPHPSENTMNIRVETYEKPAADLFKEA 79
M+ + S PKVE+IG DQ +QTFVLR+EDHTLGNALRYVL+KNPDVKFCGYSIPHPSEN MN+RVETY KPAA+LFK+A
Sbjct: 1 MNQDHPSNPKVEIIGADQRSQTFVLRNEDHTLGNALRYVLIKNPDVKFCGYSIPHPSENIMNVRVETYGKPAAELFKKA 79
BLAST of Gcaud2429.t1 vs. uniprot
Match: R7QPU5_CHOCR (RNA_pol_L_2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPU5_CHOCR) HSP 1 Score: 115 bits (287), Expect = 3.550e-30 Identity = 53/73 (72.60%), Postives = 64/73 (87.67%), Query Frame = 0
Query: 7 SEPKVEVIGTDQTNQTFVLRDEDHTLGNALRYVLVKNPDVKFCGYSIPHPSENTMNIRVETYEKPAADLFKEA 79
+E K+EV G D+T TF+LRDEDHTLGN+LRYVL+KNP V+FCGYSIPHPSEN MNIRVETY+ AAD+F++A
Sbjct: 7 NESKLEVSGIDETCLTFILRDEDHTLGNSLRYVLMKNPQVRFCGYSIPHPSENIMNIRVETYKGSAADVFRKA 79
BLAST of Gcaud2429.t1 vs. uniprot
Match: A0A8B6DKY2_MYTGA (DNA-directed RNA polymerase I subunit D n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DKY2_MYTGA) HSP 1 Score: 99.4 bits (246), Expect = 9.150e-24 Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 0
Query: 10 KVEVIGT----DQTNQTFVLRDEDHTLGNALRYVLVKNPDVKFCGYSIPHPSENTMNIRVETYEKPAADLFK 77
++EVI T D+T +TFV +EDHTLGN+LRY+++KNPDVKFCGYS+PHPSE +N RV+TY KPA D+ K
Sbjct: 19 RLEVIETPGEEDETCKTFVFHNEDHTLGNSLRYIIMKNPDVKFCGYSVPHPSELKINFRVQTYGKPAVDILK 90
BLAST of Gcaud2429.t1 vs. uniprot
Match: UPI00138FD40B (DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FD40B) HSP 1 Score: 98.6 bits (244), Expect = 1.200e-23 Identity = 43/72 (59.72%), Postives = 60/72 (83.33%), Query Frame = 0
Query: 10 KVEVIGT----DQTNQTFVLRDEDHTLGNALRYVLVKNPDVKFCGYSIPHPSENTMNIRVETYEKPAADLFK 77
K+EV+ T D++ TFVL DEDHTLGN+LRY+++KNPDVKFCGYSIPHPSE+ +N+R++T+ PA+D+ +
Sbjct: 12 KLEVVPTGDPDDESCMTFVLHDEDHTLGNSLRYIIMKNPDVKFCGYSIPHPSESKINLRIQTHGTPASDVLR 83
BLAST of Gcaud2429.t1 vs. uniprot
Match: UPI001E1E03AD (DNA-directed RNA polymerases I and III subunit RPAC2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E03AD) HSP 1 Score: 98.6 bits (244), Expect = 2.410e-23 Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 0
Query: 17 DQTNQTFVLRDEDHTLGNALRYVLVKNPDVKFCGYSIPHPSENTMNIRVETYEKPAADLFK 77
D+T QTFVL +EDHTLGN+LRYV++KNPD +FCGYSIPHPSE +N RV+TY KPA D+ +
Sbjct: 36 DETCQTFVLNNEDHTLGNSLRYVIMKNPDTQFCGYSIPHPSEEKINFRVQTYGKPATDVLR 96
BLAST of Gcaud2429.t1 vs. uniprot
Match: A7SBE9_NEMVE (DNA-directed RNA polymerase I subunit D (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SBE9_NEMVE) HSP 1 Score: 96.7 bits (239), Expect = 3.280e-23 Identity = 39/61 (63.93%), Postives = 54/61 (88.52%), Query Frame = 0
Query: 17 DQTNQTFVLRDEDHTLGNALRYVLVKNPDVKFCGYSIPHPSENTMNIRVETYEKPAADLFK 77
D++ TFVL DEDHTLGN+LRY+++KNPDVKFCGYSIPHPSE+ +N+R++T+ PA+D+ +
Sbjct: 1 DESCMTFVLHDEDHTLGNSLRYIIMKNPDVKFCGYSIPHPSESKINLRIQTHGTPASDVLR 61
BLAST of Gcaud2429.t1 vs. uniprot
Match: UPI000A2A7886 (DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7886) HSP 1 Score: 97.4 bits (241), Expect = 5.030e-23 Identity = 43/72 (59.72%), Postives = 58/72 (80.56%), Query Frame = 0
Query: 10 KVEVIGT----DQTNQTFVLRDEDHTLGNALRYVLVKNPDVKFCGYSIPHPSENTMNIRVETYEKPAADLFK 77
K+EVI T D+T TFV+ EDHTLGN+LRY+++KNP+VKFCGYS+PHPSEN +N+R++TY PA D+ +
Sbjct: 11 KLEVIPTGDPDDETCATFVMHGEDHTLGNSLRYMIMKNPEVKFCGYSLPHPSENKINLRIQTYGSPATDVLR 82
BLAST of Gcaud2429.t1 vs. uniprot
Match: UPI001B889254 (DNA-directed RNA polymerases I and III subunit RPAC2-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B889254) HSP 1 Score: 96.3 bits (238), Expect = 1.170e-22 Identity = 39/63 (61.90%), Postives = 53/63 (84.13%), Query Frame = 0
Query: 16 TDQTNQTFVLRDEDHTLGNALRYVLVKNPDVKFCGYSIPHPSENTMNIRVETYEKPAADLFKE 78
TD+T QTF++ DEDHTLGN LRY++ K+ DV+FCGYSIPHPSEN +N+R++T KPA D+ ++
Sbjct: 22 TDETCQTFIMEDEDHTLGNGLRYIITKSDDVQFCGYSIPHPSENKLNLRIQTNGKPATDVLED 84
BLAST of Gcaud2429.t1 vs. uniprot
Match: UPI000C6E0DFD (DNA-directed RNA polymerases I and III subunit RPAC2-like isoform X2 n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E0DFD) HSP 1 Score: 94.0 bits (232), Expect = 5.990e-22 Identity = 37/61 (60.66%), Postives = 51/61 (83.61%), Query Frame = 0
Query: 17 DQTNQTFVLRDEDHTLGNALRYVLVKNPDVKFCGYSIPHPSENTMNIRVETYEKPAADLFK 77
D T +TFVL EDHTLGN+LRY+++KNP++KFCGY++PHPSEN +N+R++TY A D F+
Sbjct: 17 DDTTKTFVLNGEDHTLGNSLRYMIMKNPEIKFCGYAVPHPSENKINLRIQTYGSSATDQFR 77
BLAST of Gcaud2429.t1 vs. uniprot
Match: UPI000C6DEB5F (DNA-directed RNA polymerases I and III subunit RPAC2-like isoform X1 n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DEB5F) HSP 1 Score: 94.0 bits (232), Expect = 1.650e-21 Identity = 37/61 (60.66%), Postives = 51/61 (83.61%), Query Frame = 0
Query: 17 DQTNQTFVLRDEDHTLGNALRYVLVKNPDVKFCGYSIPHPSENTMNIRVETYEKPAADLFK 77
D T +TFVL EDHTLGN+LRY+++KNP++KFCGY++PHPSEN +N+R++TY A D F+
Sbjct: 17 DDTTKTFVLNGEDHTLGNSLRYMIMKNPEIKFCGYAVPHPSENKINLRIQTYGSSATDQFR 77 The following BLAST results are available for this feature:
BLAST of Gcaud2429.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2429.t1 ID=Gcaud2429.t1|Name=Gcaud2429.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=170bpback to top |