Gcaud2386.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2386.t1
Unique NameGcaud2386.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length131
Homology
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BLAST of Gcaud2386.t1 vs. uniprot
Match: R7Q5J3_CHOCR (Coiled-coil domain-containing protein 86 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5J3_CHOCR)

HSP 1 Score: 123 bits (308), Expect = 1.300e-33
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0 
Query:    2 QPEIASTSPSAEKPVTPVVPSTKGHRPWKKHKRRPASAQRRTAALKLTLQQKMRRREQRETLMRIVRAAKEADAAXXXXXXXXXXXXXXXDAENEARGTQKLVITNPKKLARMSKKQFLNYVH 124
            +P   + +P+  KP   +VPSTKGHRPWKK K R ASAQRRTA+LK++L+ K +RR+ R  L+RIV+AAKEADA                  ENE R TQK+VITNPKKLARMSKKQ+L YVH
Sbjct:   10 RPSAPTDAPNPTKPQIALVPSTKGHRPWKKPKTRRASAQRRTASLKISLEMKNKRRQDRAALLRIVKAAKEADANSKQAERKRRADKRKLKEENERRSTQKVVITNPKKLARMSKKQYLKYVH 132
The following BLAST results are available for this feature:
BLAST of Gcaud2386.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q5J3_CHOCR1.300e-3356.91Coiled-coil domain-containing protein 86 n=1 Tax=C... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..98
IPR026570Coiled-coil domain-containing protein 86PANTHERPTHR13557UNCHARACTERIZEDcoord: 6..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_830_length_17382_cov_5.634087contigNODE_830_length_17382_cov_5.634087:8405..8797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2386.t1Gcaud2386.t1Gracilaria caudata M_176_S67 malemRNANODE_830_length_17382_cov_5.634087 8405..8797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2386.t1 ID=Gcaud2386.t1|Name=Gcaud2386.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=131bp
MQPEIASTSPSAEKPVTPVVPSTKGHRPWKKHKRRPASAQRRTAALKLTL
QQKMRRREQRETLMRIVRAAKEADAAAKEAERNRRAEKRKKDAENEARGT
QKLVITNPKKLARMSKKQFLNYVHKNNLKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026570CCDC86