Gcaud2362.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2362.t1
Unique NameGcaud2362.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length257
Homology
BLAST of Gcaud2362.t1 vs. uniprot
Match: A0A2V3J0B5_9FLOR (Peroxisome biogenesis protein 19-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0B5_9FLOR)

HSP 1 Score: 295 bits (756), Expect = 6.710e-98
Identity = 155/256 (60.55%), Postives = 194/256 (75.78%), Query Frame = 0
Query:    1 MDDTELDGILDGALEAFDHVQDGSSAPSRATELSDVEEIARDMAPDTAIREESGTRSPVRNDETGKALEEALNALRELGVGEDQGREEVDEADMKLVEEFMTSLSSSLGNLAPQNPLDERPPGAAQASEAEHVNGGRPEVEKLVDTIVGQLLSEDVLKLPMMHMRTAYEEWLPKNIDALSAEERERYTKQQELVRQICAKYEAKADSAEIMELLSKMQDTGSPPDAVLQNLDTAAPGSPSFQASDIEKFGEMCPMQ 256
            MDD ELD ILDGALEAFD V+D     S+A E SD  EIA+D+AP+ +I EE+ ++ P   DE  +ALEEALN+L++LG+ +DQ +E+V + D+KLVEEF+T+LSSS G L  QNP+D +   A    E E   G  PE+EK VDTIVGQLLSEDVLK PMM MRTAYEEWLP+N  +L+ EE+ERYT Q+ LV QIC KY AKADS+EIM+LLSKMQDTGSPPDA+L+ +D A+  SP+ +A D++K  EMCPMQ
Sbjct:    1 MDDDELDNILDGALEAFDDVRDAPHTVSKA-EASDTAEIAQDIAPNQSIHEETASKPPFGTDEASEALEEALNSLKKLGISQDQEKEDVIDQDVKLVEEFLTTLSSSFGALNAQNPVDGQSADATAPGETESAKGAAPEMEKFVDTIVGQLLSEDVLKYPMMQMRTAYEEWLPENAGSLTKEEKERYTVQKNLVEQICDKYTAKADSSEIMDLLSKMQDTGSPPDAILKKIDNASSPSPAVEAPDVDKLVEMCPMQ 255          
BLAST of Gcaud2362.t1 vs. uniprot
Match: A0A7S1TLN9_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLN9_9RHOD)

HSP 1 Score: 95.9 bits (237), Expect = 7.700e-20
Identity = 92/287 (32.06%), Postives = 131/287 (45.64%), Query Frame = 0
Query:    2 DDTELDGILDGALEAFD----HVQDGSSAPSRATELSDVEEIARDMAPDTAIREESGTRSPVRNDETGKALEEALNALRELGVGEDQGREEVDEA--------------DMKLVEEFMTSLSSSL-GNLAPQNPLDERPPGAAQASEAEHVNGG----RPEVEKLVDTIVGQLLSEDVLKLPMMHMRTAYEEWLPKNIDALSAEERERYTKQQELVRQICAKYEAK-ADSAEIMELLSKMQDTGSPPDAVLQNL--------DTAAPGSPSFQASDIEKFGEMCPMQ 256
            D  +LDGILD AL+ F+    H Q   SA +   E   V++       ++ +   SG     R D+   ALEEA+ AL  LG G   G                     D   +E  + +L +SL GNL+  +         A A+E  H  GG      E+EK+++T++ Q+LS DVLK PM  MR  Y E L      LS E+R R+ KQ +++ Q+ A YE +  D + + ELL +MQ  G PP  +   +        D  A G+ S     +EK  E C  Q
Sbjct:   12 DGDDLDGILDSALDEFEPELAHSQTADSADASPQEALSVQQ-------ESPL---SGGSEKARKDDNA-ALEEAMRALNTLGAGLKSGSXXXXXXXXXXAASASNGGAHDAVAMEHALQALMNSLEGNLSEDDLQAMNDLNGAHAAEGSH--GGLAESTDELEKMMETVMQQVLSSDVLKEPMEQMRMQYRELLNSESADLSTEDRARFQKQSDIIEQVVAIYEHENPDFSRVTELLQEMQQHGEPPAHIADEIARSHGLEADENAAGT-SGDVEALEKLTEQCATQ 284          
BLAST of Gcaud2362.t1 vs. uniprot
Match: A0A1J3DGY0_NOCCA (Peroxisome biogenesis protein 19-1 (Fragment) n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A1J3DGY0_NOCCA)

HSP 1 Score: 86.7 bits (213), Expect = 2.690e-16
Identity = 70/249 (28.11%), Postives = 123/249 (49.40%), Query Frame = 0
Query:    3 DTELDGILDGALEAFDHV--------QDGSSAPSRATELSDVEEIARDMA---PDTAIREESGTRSPVRNDETGKALE-------EALNALRELGVGEDQGREEVDEADMKLVEEFMTSLSSSLGNLAPQNPLDERPPGAAQASEAEHVNGGRPEVEKLVDTIVGQLLSEDVLKLPMMHMRTAYEEWLPKNIDALSAEERERYTKQQELVRQICAKYEAKAD-SAEIMELLSKMQDTGSPPDAVLQNLD 232
            D +LD +LD AL+ F  +        +DG        ELS +    + +    PD   +++ G +   + D   +AL+       E +  L  +   + Q   +VD+A   LVE+F+    +                     SE++       ++E +V+T++ QLLS+D+L  PM  +   Y +WL +N  +LS E+ ERY+KQ +L++++   YE + D S+ IME++ KMQ+ G PP+ ++Q +D
Sbjct:   65 DDDLDELLDSALDDFKDLNLAQRNQREDGEEKXXXXEELSPLPSGVQGLGMGLPDMRSKKK-GNQKVSKEDHVAEALDKLREQTRETVKGLESISSKQQQPASDVDDA---LVEDFLKQFEN--------------------LSESQ-------DLESIVETMMQQLLSKDILHEPMKEIGARYPKWLKENEASLSKEDYERYSKQYKLIKELNEVYENEPDNSSRIMEIMQKMQECGQPPNDIVQEMD 282          
BLAST of Gcaud2362.t1 vs. uniprot
Match: A9NRV0_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NRV0_PICSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.680e-15
Identity = 45/124 (36.29%), Postives = 74/124 (59.68%), Query Frame = 0
Query:  135 GGRPEVEKLVDTIVGQLLSEDVLKLPMMHMRTAYEEWLPKNIDALSAEERERYTKQQELVRQICAKYEAKADSAE-IMELLSKMQDTGSPPDAVLQNL----DTAAPGSPSFQASDIEKFGEMC 253
            GG  +++ +VDT++ QLLS+++L  PM  +   Y +WL +    +S E+ ERY+ Q EL++Q+C  YEA+ D+ + I+EL+ KMQD G PP  ++Q L    +  + G P+      +  G  C
Sbjct:  128 GGTQDMQSVVDTMMRQLLSKEILHEPMKEIGERYPKWLEERKSTISKEDYERYSCQYELIKQLCKVYEAEPDNFDKIVELMQKMQDCGQPPSDIVQELAPGLNLGSEGGPALSELFADNSGSNC 251          
BLAST of Gcaud2362.t1 vs. uniprot
Match: A0A388JV43_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JV43_CHABU)

HSP 1 Score: 84.0 bits (206), Expect = 2.760e-15
Identity = 55/147 (37.41%), Postives = 85/147 (57.82%), Query Frame = 0
Query:  104 LSSSLGNLAPQN--PLDERPPGAAQ-ASEAEHVN---------GGRPEVEKLVDTIVGQLLSEDVLKLPMMHMRTAYEEWLPKNIDALSAEERERYTKQQELVRQICAKYEAKADSAE-IMELLSKMQDTGSPPDAVLQNLDTAAPG 237
            +S++L  LA Q    +D   P A + A++ E V          GG  +++ L++T++ QLLS++VL  PMM +   Y  WL  N   +S E+ +RY KQ EL+R +C  Y+ + D  E IMEL+ +MQD G+PP  +++ L   APG
Sbjct:  128 VSATLQALANQTRQTVDRMDPNANEDATDQEFVEKLMQQFEALGGSQDIQGLMETMIKQLLSKEVLHAPMMEISERYPVWLEANKSKISEEDYKRYAKQLELMRSLCEMYDTRPDDFERIMELMQQMQDCGNPPSEIMKEL---APG 271          
BLAST of Gcaud2362.t1 vs. uniprot
Match: A0A0D6R2W2_ARACU (Uncharacterized protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R2W2_ARACU)

HSP 1 Score: 82.0 bits (201), Expect = 5.680e-15
Identity = 69/235 (29.36%), Postives = 116/235 (49.36%), Query Frame = 0
Query:    4 TELDGILDGALEAFDHVQDGSSAPSRATELSDVEEIARDMAPDTAIREESGTRSPVRNDETGKALEEALNALRELGVGEDQGREEVDEADMKLVEEFMTSLSSSLGNLAPQNPLDERPPGAAQASEAEHVNGGRPEVEKLVDTIVGQLLSEDVLKLPMMHMRTAYEEWLPKNIDALSAEERERYTKQQELVRQICAKYEAKADSAE-IMELLSKMQDTGSPPDAVLQNLDTAAPG 237
            T+LD +LD AL+ F  ++ G  AP +A +  ++          +++ +  GT  P  N  + K  ++ + +   L          V E   KL ++   +L       AP +   E+        +     GG  +++ +VDT++ QLLS+++L  PM  +   Y +WL      +S E+  RY+ Q EL++Q+C  YE + D+ E I+EL+ KMQD G PP  ++Q L   APG
Sbjct:    5 TDLDDLLDSALDDFGKLELG--APPKAAKDENL------SGSSSSVVQGLGTGLP--NPPSRKKGKQKVGSSSSLPKPTSTDGH-VSETLEKLAQQTRETLQGLQSTAAPDDAGGEKM--VEDLLKQFEELGGSKDMQSMVDTMMHQLLSKEILHEPMKEIGERYPKWLEAKKATISNEDHARYSHQYELIKQLCEVYEMEPDNFEKIVELMQKMQDCGQPPSDIVQEL---APG 223          
BLAST of Gcaud2362.t1 vs. uniprot
Match: A0A2R6X013_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X013_MARPO)

HSP 1 Score: 81.6 bits (200), Expect = 1.290e-14
Identity = 76/263 (28.90%), Postives = 117/263 (44.49%), Query Frame = 0
Query:    5 ELDGILDGALEAFDHVQDGSSAPSRATELSDVEEIARDMAPDTAIREESGTRSPVRNDETGKALEEALN-ALRELGVGEDQGR-EEVDEADMKLVEEFMTSLSSSL--GNLAPQNPLDERPPGAAQASEAEHVN-------------------------GGRPEVEKLVDTIVGQLLSEDVLKLPMMHMRTAYEEWLPKNIDALSAEERERYTKQQELVRQICAKYEAKADS-AEIMELLSKMQDTGSPPDAVLQNLDTAAPG 237
            +LD +LD AL+ F  V+    +P      S  E +++  +   A+R+  G+   V +  TG  L + L   L  L  G+ +    ++  +         TS  SS      APQ PL        Q +     N                         GG  +++ ++DT++ QLLS++VL  PM  +   Y EWL  N   LS E+  RYT+Q + + Q+C  YEA  D   +IMEL+  MQ+ G PP  +++ L   APG
Sbjct:    3 DLDDLLDSALDDFKKVEISKPSPK----ASGKESLSKQKS---AVRDSDGSGPSVSDGSTGANLGQGLGLGLPALTPGKKKSSGNKIGSSSQTGATSSGTSKQSSWTRDKSAPQRPLSATLDMLQQQTRETMGNIDVADKDELMGEELVENLMKQFEDLGGSQDMQSIMDTMMRQLLSKEVLHEPMKEIGERYPEWLAANKSQLSQEDYSRYTRQHQFILQLCDVYEATPDDFPKIMELMQNMQNCGQPPSDIVKEL---APG 255          
BLAST of Gcaud2362.t1 vs. uniprot
Match: UPI00053C3653 (peroxisome biogenesis protein 19-2 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C3653)

HSP 1 Score: 79.7 bits (195), Expect = 3.400e-14
Identity = 77/257 (29.96%), Postives = 127/257 (49.42%), Query Frame = 0
Query:    5 ELDGILDGALEAFDHV---QDGSSAPSRATELSDVEEIARDMA---PDTAIREESGTRSPVRNDETGKALEEALNALRELGVGEDQGREEVDEADMKLVEEFMTSLSSSLGNLAPQNPLDERPPGAAQASEAEHVNGGRPEVEKLVDTIVGQLLSEDVLKLPMMHMRTAYEEWLPKNIDALSAEERERYTKQQELVRQICAKYEAKAD-SAEIMELLSKMQDTGSPPDAVLQNLDTAAPGSPSFQASDIEKFGEMCP 254
            +LD +LD AL+ F  +   Q       +  EL+ +    + +    PD  +R +   +  V  +E   A  EAL+ LRE      Q RE V         + + SLS S        P+ +         + E + G + ++E +VDT++ QLLS+D+L  PM  +   Y +WL ++  +LS EE ERY++Q EL++++   YE + + S +IM+++ KMQ+ G PP  ++Q +D      P F   D    G+M P
Sbjct:    8 DLDELLDSALDDFKDLNLAQRSGGDEKKEKELNPLPSGVQGLGMGLPD--MRNKKKGKQKVAKEENHVA--EALDKLRE------QTRETV---------KGLESLSKS--------PVSDDAMVEDWLKQFEELAGSK-DLESIVDTMMQQLLSKDILHEPMKEIGERYPKWLEEHKASLSKEEYERYSRQYELIKELNGVYENEPNNSIKIMDIMQKMQECGQPPSDIVQEID------PGF---DFASLGQMSP 227          
BLAST of Gcaud2362.t1 vs. uniprot
Match: UPI0018AEEC6A (peroxisome biogenesis protein 19-2-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AEEC6A)

HSP 1 Score: 79.3 bits (194), Expect = 5.020e-14
Identity = 68/229 (29.69%), Postives = 115/229 (50.22%), Query Frame = 0
Query:    5 ELDGILDGALEAFDHVQDGSSAPSRATELSDVEEIARDMAPDTAIREESGTRSPVRNDETGKA-LEEALNALRELGVGEDQGREEVDEADMKLVEEFMTSLSSSLGNLAPQNPLDERPPGAAQASEAEHVNGGRPEVEKLVDTIVGQLLSEDVLKLPMMHMRTAYEEWLPKNIDALSAEERERYTKQQELVRQICAKYEAKADSAE-IMELLSKMQDTGSPPDAVLQNL 231
            +LD +LD AL+ F  +       S A+  + V+ +   + PD   +++   R+     +TG +   EAL  L +      Q RE V         E  T+ + + G  A     DE         + E + G + ++E ++DT++ QLLS+D+L  PM  +   Y +WL ++ D LS EE  RY +Q EL+ ++   +E + D+   I++L+ KMQ+ G PPD ++Q L
Sbjct:    4 DLDELLDSALDDFKKIDLAPEWRSNASSSTPVQGLGLGL-PDLKAKKKVKQRAAAATMKTGSSHASEALEKLTQ------QTREAVRGL------ESATASAGTRGTDADGLQEDETAMVEEFIKKFEELTGSQ-DMESIMDTVMQQLLSKDILHEPMKEIGERYPKWLEEHKDGLSKEEYGRYHQQYELILKLNEAFEHEPDNFNNIVDLMQKMQECGQPPDDIVQEL 218          
BLAST of Gcaud2362.t1 vs. uniprot
Match: A0A565B645_9BRAS (Uncharacterized protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565B645_9BRAS)

HSP 1 Score: 79.0 bits (193), Expect = 5.900e-14
Identity = 40/98 (40.82%), Postives = 69/98 (70.41%), Query Frame = 0
Query:  136 GRPEVEKLVDTIVGQLLSEDVLKLPMMHMRTAYEEWLPKNIDALSAEERERYTKQQELVRQICAKYEAKAD-SAEIMELLSKMQDTGSPPDAVLQNLD 232
            G  ++E +V+T++ QLLS+DVL  PM  +   Y +WL +N  +LS E+ +RYT+Q +L+ ++ A YE + + S++IME++ KMQ+ G PP+ ++Q +D
Sbjct:  125 GSTDLESMVETMMQQLLSKDVLHEPMKEIGARYPKWLKENEASLSKEDYKRYTQQYKLIEELNAVYEHEPNNSSKIMEIMQKMQECGQPPNDIVQEMD 222          
The following BLAST results are available for this feature:
BLAST of Gcaud2362.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0B5_9FLOR6.710e-9860.55Peroxisome biogenesis protein 19-1 n=1 Tax=Gracila... [more]
A0A7S1TLN9_9RHOD7.700e-2032.06Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A1J3DGY0_NOCCA2.690e-1628.11Peroxisome biogenesis protein 19-1 (Fragment) n=5 ... [more]
A9NRV0_PICSI1.680e-1536.29Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
A0A388JV43_CHABU2.760e-1537.41Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A0D6R2W2_ARACU5.680e-1529.36Uncharacterized protein n=1 Tax=Araucaria cunningh... [more]
A0A2R6X013_MARPO1.290e-1428.90Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
UPI00053C36533.400e-1429.96peroxisome biogenesis protein 19-2 isoform X1 n=2 ... [more]
UPI0018AEEC6A5.020e-1429.69peroxisome biogenesis protein 19-2-like n=1 Tax=Di... [more]
A0A565B645_9BRAS5.900e-1440.82Uncharacterized protein n=1 Tax=Arabis nemorensis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006708Pex19 proteinPFAMPF04614Pex19coord: 132..256
e-value: 1.7E-26
score: 93.5
IPR006708Pex19 proteinPANTHERPTHR12774PEROXISOMAL BIOGENESIS FACTOR 19coord: 50..244
IPR038322Pex19, C-terminal domain superfamilyGENE3D1.20.120.900Pex19, mPTS binding domaincoord: 128..237
e-value: 1.2E-25
score: 92.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_48_length_65905_cov_4.503282contigNODE_48_length_65905_cov_4.503282:62807..63577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2362.t1Gcaud2362.t1Gracilaria caudata M_176_S67 malemRNANODE_48_length_65905_cov_4.503282 62807..63577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2362.t1 ID=Gcaud2362.t1|Name=Gcaud2362.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=257bp
MDDTELDGILDGALEAFDHVQDGSSAPSRATELSDVEEIARDMAPDTAIR
EESGTRSPVRNDETGKALEEALNALRELGVGEDQGREEVDEADMKLVEEF
MTSLSSSLGNLAPQNPLDERPPGAAQASEAEHVNGGRPEVEKLVDTIVGQ
LLSEDVLKLPMMHMRTAYEEWLPKNIDALSAEERERYTKQQELVRQICAK
YEAKADSAEIMELLSKMQDTGSPPDAVLQNLDTAAPGSPSFQASDIEKFG
EMCPMQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006708Pex19
IPR038322Pex19_C_sf