Gcaud2349.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2349.t1
Unique NameGcaud2349.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length650
Homology
BLAST of Gcaud2349.t1 vs. uniprot
Match: A0A2V3J037_9FLOR (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J037_9FLOR)

HSP 1 Score: 1006 bits (2600), Expect = 0.000e+0
Identity = 483/645 (74.88%), Postives = 557/645 (86.36%), Query Frame = 0
Query:    1 MHSKGAFVPVGFYRQSESWLSSKLSYSPQICSQRIRNVTSAVLDHPKAKSQTRRPLAPGAPGHRFYEFSPDDIEAIRIRHCRLESKELCDFVWEQVTHQKARLEDLAASLSTCTASKEHGGDLGWWWKDEVVPQSTDEFGINDQLLAVALRTRPNKVERVETKNGWHVFVVEEARHVLRTKRERTVSRKNPNRTKEAGSLTE-VPAPLPFTYAIQTLGCQMNRSDSERMAGVLNRLGYLETSDPFRASVLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTEVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVNVIYGCGENCSFCTVGNVVRPVEQSRAMDAIRAEIEEAAKDGIREVVLLGQNIDAYGRDMYPRRTFAELLTFVHDVEGIERIRFTTSHPRYISSNLVNVCATLPKIMPYFHIPPQSGDNTILKEMRRGYTAEAYETIVNRIRERIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAVMKNQVPDAVKSDRLHRMNELVKDHALERSLRYVGRIEHVLVEEKNPKDAQQVMGRTPANRRVYFEGSIAELKGKIVPVKIEHAYPFSLKGKK 644
            M    AFV   F    E++L  +   S Q  S+  R    AV+   +   +  R   PG PGHRF+  SPDDIEAIRIRHCRLE+KELCD VW+Q+T  KARL D+AASLSTC ASK  GGDLGWWWK+E+VP++ +EFGINDQLLA ALR+RP+ +ERV+TK+GWHVF+VEEARHVLRTK ERT SR+NPNR +  G   E VP PLP TYA+QTLGCQMNRSDSERMAG LNRLGY ETSDPF+AS+L+LNTCNIREHAESKVYSY+GRHV+RKR YP +VTLCVAGCVAQQEGEKMLRRIPELDLVFGPQY NRLGDLL+DVERNGCQ+AATDP HIQEDISKPKRES+V+AW+NVIYGCGENCSFCTVGNVVR VEQSR+M++IR+EIEEAA+DG RE+VLLGQNIDAYGRDMYP+RTF++LL F+HD++GIERIRFTTSHPRYIS NLV++CATLP++MP+FHIPPQSGDN +LK MRRGYT EAYE +V RIR+ IPDA ICGDMIVGFPGETEEQFQ+SL+LMDR+KFD MNTAAYSPRPQTPAA+M+NQVPDAVK DRL+RMNE+VK HALERSLRY+GR E VLVE +NPK+A+QV+GRTP NR VYF+GSI EL+GKIV V+IE AYPFSLKG++
Sbjct:    1 MRLNTAFVAGSFCTPLETFLPQRNLCSRQTFSESGRKSIVAVIQQERTPRELNRVPRPGVPGHRFHNISPDDIEAIRIRHCRLETKELCDQVWKQITRDKARLADVAASLSTCNASKHQGGDLGWWWKEEIVPENVEEFGINDQLLAAALRSRPHTLERVQTKHGWHVFIVEEARHVLRTKHERTASRQNPNRKRGVGVNGEQVPRPLPHTYAVQTLGCQMNRSDSERMAGELNRLGYTETSDPFQASLLILNTCNIREHAESKVYSYVGRHVMRKRMYPNDVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYVNRLGDLLTDVERNGCQVAATDPTHIQEDISKPKRESSVSAWINVIYGCGENCSFCTVGNVVRSVEQSRSMESIRSEIEEAARDGYREIVLLGQNIDAYGRDMYPKRTFSQLLDFIHDIDGIERIRFTTSHPRYISQNLVDMCATLPRVMPFFHIPPQSGDNDVLKAMRRGYTVEAYEAVVKRIRKSIPDAAICGDMIVGFPGETEEQFQKSLELMDRVKFDVMNTAAYSPRPQTPAALMENQVPDAVKMDRLYRMNEVVKAHALERSLRYIGRTELVLVEHQNPKNARQVVGRTPTNRSVYFDGSIEELRGKIVSVEIEDAYPFSLKGRR 645          
BLAST of Gcaud2349.t1 vs. uniprot
Match: R7QB29_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB29_CHOCR)

HSP 1 Score: 869 bits (2245), Expect = 1.840e-311
Identity = 431/656 (65.70%), Postives = 513/656 (78.20%), Query Frame = 0
Query:    6 AFVPVGFYRQSES--WLSSK--------LSYSPQICSQRIRNVTSAVLDHPKAKSQTRR--PLAPGAPGHRFYEFSPDDIEAIRIRHCRLESKELCDFVWEQVTHQKARLEDLAASLSTCTASKEHGGDLGWWWKDEVVPQSTDEFGINDQLLAVALRTRPNKVERVETKNGWHVFVVEEARHVLRTKRERTVSRKNPNRTKEAGSLTEVPAPLPFTYAIQTLGCQMNRSDSERMAGVLNRLGYLETSDPFRASVLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTEVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVNVIYGCGENCSFCTVGNVVRPVEQSRAMDAIRAEIEEAAKDGIREVVLLGQNIDAYGRDMYPRRTFAELLTFVHDVEGIERIRFTTSHPRYISSNLVNVCATLPKIMPYFHIPPQSGDNTILKEMRRGYTAEAYETIVNRIRERIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAVMKNQVPDAVKSDRLHRMNELVKDHALERSLRYVGRIEHVLVEEKNPKDAQQVMGRTPANRRVYFEGSIAELKGKIVPVKIEHAYPFSLKGKKVGLAY 649
            AFVP  F R       LS+K        ++ S    S      T AVL      S       +A G PG+RFY+ SP+DIEA+RIRHCR++++EL   V+ ++  ++  L  +A  +STC+ASKE GGDLGWWW+DE +P   ++FG+N+QLL  ALRTRPN++E+V+T++GWHVF+VEE RHV+RTK ERT SR+  ++     +  E   P+  TYA+QTLGCQMNRSDSERMAG L R+GY E  DPF+ASVLVLNTCNIR+HAE KVYSY+GRH  RKRKYP +VTL VAGCVAQQEGE+MLRRIPELDLVFGPQYANRLGDLL DVE N CQ+AATDPIHIQEDISKPKRESTVTAWVNV+YGCGENC+FCTVGNVVR VEQSR + +IRAE+E+ A+ GIREVVLLGQNIDAYGRDMYP++TFAELL  VHDV+GI+RIRFTTSHPRYIS NLV  CA LP +MPYFHIPPQSG++ +LKEM+RGYT +A++ +VNRIRE  PDA ICGDMIVGFPGETEEQFQ SL LM+ +KFD MNTAAYSPRP TPAA   NQ+ DA+K+DRL RMNELV  HALERS+RYVGR+EHVLVE+++ K   +V+GRTP NR V F GS  EL+GKIVPVKI  A PF+L G+  G  Y
Sbjct:    2 AFVPSAFLRPGSGAETLSAKSNIAQTTHIARSSYSLSNSAHGGTRAVLQREDTISPRADIPKIASGLPGNRFYDISPNDIEAVRIRHCRVDTEELAKVVFRKIVAREESLAKMAKMVSTCSASKESGGDLGWWWQDEAIPADREQFGVNEQLLGAALRTRPNRLEQVKTEDGWHVFMVEEVRHVIRTKHERTPSRRKADKKDFKNTSAEALVPVAKTYAMQTLGCQMNRSDSERMAGELARIGYKEIDDPFKASVLVLNTCNIRDHAEKKVYSYIGRHAARKRKYPQDVTLAVAGCVAQQEGERMLRRIPELDLVFGPQYANRLGDLLKDVETNQCQVAATDPIHIQEDISKPKRESTVTAWVNVMYGCGENCTFCTVGNVVRSVEQSRTISSIRAEMEDIARSGIREVVLLGQNIDAYGRDMYPKKTFAELLRNVHDVDGIDRIRFTTSHPRYISRNLVTTCAELPNVMPYFHIPPQSGNDDVLKEMKRGYTVKAFKAVVNRIREATPDAAICGDMIVGFPGETEEQFQDSLKLMEDVKFDVMNTAAYSPRPNTPAAEYSNQISDAMKADRLARMNELVTRHALERSMRYVGRVEHVLVEQESSKTPGEVVGRTPTNRTVRFSGS-RELRGKIVPVKIVEALPFTLLGEIAGSPY 656          
BLAST of Gcaud2349.t1 vs. uniprot
Match: R7QN23_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN23_CHOCR)

HSP 1 Score: 572 bits (1474), Expect = 8.240e-196
Identity = 297/578 (51.38%), Postives = 387/578 (66.96%), Query Frame = 0
Query:   92 VWEQVTHQKARLEDLAASLSTCTASKEHGGDLGWWW------------KDEVVPQSTDEF----GINDQLLAVALRTRPNKVERVETKNGWHVFVVEEARHV----LRTKRERTVSRKNPNRTKEAGSLTEVPAPLPFTYAIQTLGCQMNRSDSERMAGVLNRLGYLETSDPFRASVLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTEVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVNVIYGCGENCSFCTVGNVVRPVEQSRAMDAIRAEIEEAAKDGIREVVLLGQNIDAYGRDMYPRRTFAELLTFVHDVEGIERIRFTTSHPRYISSNLVNVCATLPKIMPYFHIPPQSGDNTILKEMRRGYTAEAYETIVNRIRERIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAVMKNQVPDAVKSDRLHRMNELVKDHALERSLRYVGRIEHVLVEEKNPKDAQQVMGRTPANRRVYFEGSIAELKGKIVPVKIEHAYPFSLKGKKVGLAY 649
            V  QV  +++ L +L++ LS C  SK   GD GW               DE   Q  D+      ++ +LL  A+  RP  ++ V+   GW VFVVE+ RH     LR  R        PN  + +    + P     +Y IQT GCQMN SDSERMA  L R GY  T DP ++++ +LNTC +R+HAE KVYSYLG H  RK   P+EVTL VAGCVAQQEG+K+L R+PE+D+V GPQYANR+G++L D   N  QI A DPIHIQED SKP R S +TAWVN+IYGC E CS+C V N  R +EQSR M++IRAE++  A+DG REVVLLGQN+DAYGRD+YP+RTF++LL F+HDV+GIER+RFTT HPRYIS NL+   A LPK+M +FH+PPQSGDN +LKEM RGYT E Y  I  R+R+R+PDA IC D IVGFPGE+EE F+ ++D++ ++ FD     AYS RP T A + ++QV + VK+ RL  MN L+++ A +RS RY+GR   VLVE  N K   +VMGR  +NR V+FEG+  E  GKI  V+++ A+ FSL+G+ +G A+
Sbjct:    2 VTRQVRAKESSLAELSSLLSVCDTSKSKSGDTGWVQVPNPNMTVRNALADEA--QHLDDLVKSVAMHPELLHAAMAARPGALQTVQLSYGWEVFVVEDVRHAVVPTLRGARRGPGFPVTPNMRRTS---PKKPVIDDMSYYIQTFGCQMNVSDSERMAAELERKGYHATDDPKKSALYLLNTCALRDHAEQKVYSYLGPHAQRKWDAPSEVTLVVAGCVAQQEGDKLLSRVPEVDIVMGPQYANRIGEVLDDFAENMMQIVAVDPIHIQEDFSKPVRSSKITAWVNIIYGCLEKCSYCVVPNT-RGLEQSRTMESIRAELQGLARDGYREVVLLGQNVDAYGRDLYPKRTFSDLLRFIHDVDGIERVRFTTGHPRYISENLITTVAELPKVMEHFHVPPQSGDNGVLKEMGRGYTRERYMDIARRVRKRMPDASICADTIVGFPGESEEAFENTVDMVKQVVFDSNMVRAYSARPNTTAGLREDQVEEEVKARRLAVMNRLMREQAEKRSQRYLGRRVEVLVEGVNEKVDGEVMGRERSNRVVFFEGAAEEYVGKIAVVEVDEAFAFSLRGRVIGEAW 573          
BLAST of Gcaud2349.t1 vs. uniprot
Match: A0A7S0ZI68_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI68_9RHOD)

HSP 1 Score: 575 bits (1483), Expect = 8.810e-196
Identity = 302/600 (50.33%), Postives = 396/600 (66.00%), Query Frame = 0
Query:   64 RFYEFSPDDIEAIRIRHCRLESKELCDFVWEQVTHQKARLEDLAASLSTCTASKEHGGDLGW-----------WWKDEVVPQSTDEF--GINDQLLAVALRTRPNKVERV--ETKNGWHVFVVEEARHVLRTKRERTVSRKNPNRTKEAGSLTEVPAPLPF---TYAIQTLGCQMNRSDSERMAGVLNRLGYLETSDPFRASVLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTEVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVNVIYGCGENCSFCTVGNVVRPVEQSRAMDAIRAEIEEAAKDGIREVVLLGQNIDAYGRDMYPRRTFAELLTFVHDVEGIERIRFTTSHPRYISSNLVNVCATLPKIMPYFHIPPQSGDNTILKEMRRGYTAEAYETIVNRIRERIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAVMKNQVPDAVKSDRLHRMNELVKDHALERSLRYVGRIEHVLVEEKNPKDAQQVMGRTPANRRVYFEGSIAELKGKIVPVKIEHAYPFSLKGKKV 645
            RFY F P +IE I     +L S+ L D++ + +    +    LA  LS C  +K+  G  GW           +  D   PQ        I   LL  A +TRP  V +   E+ + W+VF+V +A H L  +            T   GS +++   L F   +Y I+T+GCQ N SDSERMA  L   G+    DP  A ++VLNTC IREHAE KVY +LG H IRK++  + V L V+GCVAQQEGE +LR++PELD++ GPQYANRLG+L+  VE NG QI AT+PIH+ ED+S P R S VTAWVNVIYGC E C++C V +  R +EQSR+M +IR EI +AA+ G++E+VLLGQNIDAYGRD+ P+ TF +LL ++HDVEGI+RIRF TSHPRY+SS L++ CA L K+  +FH+P QSG + IL++M RGYTA+ Y  I+  IR+++P AGI GD IVGFP E+EEQF+ +LDLM  + FD +NTAAYSPRP TPAA+MKNQVP+ +K +RL R+N LVK  A ERS RY+G IE VLVE  NPK+  QV GRT  NR V+F+G ++EL G +V V+I   + F L G+ V
Sbjct:   67 RFYTFEPSNIEYINFSCIQLTSESLADYILDAIKSNPSEFATLANQLSQCEFTKDSHGHFGWIPNPVITLSSQFTIDSPSPQCPQHIIHSIPSDLLQNAFQTRPLSVTKFYSESNHSWYVFLVNDALHKLHFE------------TFSKGSTSKLGTDLRFEQNSYVIETMGCQANSSDSERMASALENAGFHAAKDPKSAHIVVLNTCAIREHAEHKVYGHLGVHAIRKQR-DSRVLLVVSGCVAQQEGETLLRKVPELDIIAGPQYANRLGELVKHVEENGVQICATNPIHVSEDLSNPVRTSKVTAWVNVIYGCNERCTYCVVPST-RGLEQSRSMVSIRNEIVKAAESGVKEIVLLGQNIDAYGRDLTPKNTFTQLLEYIHDVEGIKRIRFLTSHPRYMSSRLIDACAKLEKVCEHFHVPFQSGSDEILQKMSRGYTAQRYLQIIQNIRDKMPHAGISGDAIVGFPEESEEQFESTLDLMRSVGFDLVNTAAYSPRPNTPAALMKNQVPEEIKQERLKRINMLVKQQAAERSARYLGLIEEVLVESMNPKNENQVCGRTQGNRIVFFDGKLSELFGTLVQVRITQTHAFYLMGEVV 652          
BLAST of Gcaud2349.t1 vs. uniprot
Match: A0A2V3IGB2_9FLOR (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGB2_9FLOR)

HSP 1 Score: 569 bits (1467), Expect = 1.880e-193
Identity = 290/588 (49.32%), Postives = 387/588 (65.82%), Query Frame = 0
Query:   60 APGHRFYEFSPDDIEAIRIRHCRLESKELCDFVWEQVTHQKARLEDLAASLSTCTASKEHGGDLGWWWKDEVVPQSTDEFG-INDQLLAVALRTRPNKVERVETKNGWHVFVVEEARHVLRTKRERTVSRK----NPNRTKEAGSLTEVPAPLPFTYAIQTLGCQMNRSDSERMAGVLNRLGYLETSDPFRASVLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTEVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVNVIYGCGENCSFCTVGNVVRPVEQSRAMDAIRAEIEEAAKDGIREVVLLGQNIDAYGRDMYPRRTFAELLTFVHDVEGIERIRFTTSHPRYISSNLVNVCATLPKIMPYFHIPPQSGDNTILKEMRRGYTAEAYETIVNRIRERIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAVMKNQVPDAVKSDRLHRMNELVKDHALERSLRYVGRIEHVLVEEKNPKDAQQVMGRTPANRRVYFEGSIAELKGKIVPVKIEHAYPFSLKG 642
            +P  RFY+FS   + AIR+ HCR+ S+ +  F+   V  ++A L  +A  LS C  ++   GD GW        +S      + D+ L VALR RP  ++  +   GW V++V + R  ++  +      K    NPN  + +    + P  +P ++ IQT GCQMN SDSER+A  L   GY +  DP ++++ +LNTC +R+HAE KVYSYLG H  RK   P +V L VAGCVAQQEG+ +L R+PE+D+V GPQYANR+ D+L+    +  Q+ A DPIHI EDISKPKR S++TAWVN+IYGC E C++C V N  R +EQSR M +IR EIE  A +G REVVLLGQN+DAYGRD+YP+ T +ELL ++HDV+GIERIRFTT HPRYIS NL+N    LPK+M +FH+PPQSGD+ +LK M+RGY+ E Y  I  RIRE++PDA IC D IVGFPGET++ FQ ++ L D + FD     AYS RP T AA   +QV + VK +RL  MN+ +++ A +RS RY+GR   VLVE  NPK + +V GR   NR V+ EG   EL GK++ V +  AYPFSL+G
Sbjct:   73 SPPPRFYDFSNHHVHAIRLTHCRVLSEHMASFIHNAVKSRRAMLSQMATLLSVCDQTRLSAGDTGWISTAPHHSKSAQPSSPVPDEFLQVALRARPATLQFEQFSYGWEVYIVSDIRQSVQPTKLGATREKGYTVNPNMRRTS---QKPPHIIPHSFFIQTFGCQMNASDSERIAAQLESQGYHQIDDPNKSAIYMLNTCALRDHAEQKVYSYLGPHAQRKWDAPQQVMLIVAGCVAQQEGDALLSRVPEIDIVMGPQYANRITDVLNLYHTSKAQVVAVDPIHIHEDISKPKRSSSITAWVNIIYGCLERCTYCVVPNT-RGLEQSRPMSSIRREIEALAAEGYREVVLLGQNVDAYGRDLYPKATLSELLRYIHDVDGIERIRFTTGHPRYISENLINTVYELPKVMEHFHVPPQSGDSQVLKAMKRGYSRERYINIARRIREKMPDAAICADTIVGFPGETDDAFQNTVSLADEVVFDANMVRAYSARPNTIAASRPDQVNEEVKMERLAIMNKKMREQAEQRSRRYLGRTVEVLVEGMNPKRSNEVSGRERTNRIVFCEGG-TELIGKLIEVTVLEAYPFSLRG 655          
BLAST of Gcaud2349.t1 vs. uniprot
Match: UPI001E1DDEB4 (LOW QUALITY PROTEIN: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDEB4)

HSP 1 Score: 553 bits (1426), Expect = 1.010e-190
Identity = 272/428 (63.55%), Postives = 333/428 (77.80%), Query Frame = 0
Query:  220 MNRSDSERMAGVLNRLGYLETSDPFRASVLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTEVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVNVIYGCGENCSFCTVGNVVRPVEQSRAMDAIRAEIEEAAKDGIREVVLLGQNIDAYGRDMYPRR-TFAELLTFVHDVEGIERIRFTTSHPRYISSNLVNVCATLPKIMPYFHIPPQSGDNTILKEMRRGYTAEAYETIVNRIRERIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAVMKNQVPDAVKSDRLHRMNELVKDHALERSLRYVGRIEHVLVEEKNPKDAQQVMGRTPANRRVYFEGSIAELKGKIVPVKIEHAYPFSLKGKKVG 646
            MNR+DSERMAG L RLGY +  DPF ++VLVLNTC+IR+HAE KVYS +GRH  RK   P+++TL VAGCVAQQEG ++LRR+P LD+V GPQYA RLGDLL DV+ N  Q+AATDP+HI EDISKP+RES+VTAW+NVIYGC E C++C V    R +EQSR+MDA+RAE+   A+ G REVVLLGQN+DAYGRD+     TFA LL F+HDV GIERIRFTTSHPRY+S+NL++ C  LPK+MP FH+PPQSGDN ILK M+RGYT+E Y  +VN IRE IP+A I GDMIVGFPGETE QFQ SL+L+ +++FD +NTAAYSPRP TPAA   NQV +A K DRL R+N+L  + ALERS RY+GR+E +LVE+++ KD   V GRTP N+   F G I  LKGK+VPV+I     F L+G+  G
Sbjct:    1 MNRADSERMAGELERLGYAKIDDPFSSAVLVLNTCSIRDHAEQKVYSIMGRHAQRKAAAPSDITLVVAGCVAQQEGMQLLRRVPALDIVMGPQYAGRLGDLLEDVQSNHVQVAATDPVHIHEDISKPRRESSVTAWLNVIYGCLERCTYCVVP-FARGLEQSRSMDAVRAELVAIAEQGFREVVLLGQNVDAYGRDLLSEAXTFAGLLRFIHDVPGIERIRFTTSHPRYMSTNLISTCRELPKVMPSFHVPPQSGDNDILKAMKRGYTSERYLAVVNNIREYIPEAAIAGDMIVGFPGETEAQFQNSLELVRKVQFDLLNTAAYSPRPNTPAATWDNQVSEAEKMDRLARINKLQDEIALERSQRYLGRVELILVEDRHAKDILSVTGRTPTNKLTKFAGDITILKGKLVPVQITSVTAFCLEGRIAG 427          
BLAST of Gcaud2349.t1 vs. uniprot
Match: A0A0G4ERE5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERE5_VITBC)

HSP 1 Score: 559 bits (1441), Expect = 2.410e-189
Identity = 299/599 (49.92%), Postives = 390/599 (65.11%), Query Frame = 0
Query:   73 IEAIRIRHCRLESKELCDFVWEQVTHQKARLEDLAASLSTCTASKEHGGDLGWW-----WKDEVVPQSTDEFGINDQLLAVALRTRPNKVERVETKNGWHVFVVEEARHVLRTKRERTVSRKNPNRTKEAGSLTEVPAP-----------------------LPFTYAIQTLGCQMNRSDSERMAGVLNRLGYLETSDPFRASVLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTEVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVNVIYGCGENCSFCTVGNVVRPVEQSRAMDAIRAEIEEAAKDGIREVVLLGQNIDAYGRDMYPRRTFAELLTFVHDVEGIERIRFTTSHPRYISSNLVNVCATLPKIMPYFHIPPQSGDNTILKEMRRGYTAEAYETIVNRIRERIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAVMKNQVPDAVKSDRLHRMNELVKDHALERSLRYVGRIEHVLVEEKNPKDAQQVMGRTPANRRVYFEGSIAELKGKIVPVKIEHAYPFSLKGK 643
            ++A+R+ H  LE++ L +   E++        DLA   S C A+K+  G +GW      + D ++P    E          A+  +P  +  V +  G H+  VE+   +L      T +   P R+K  GS   + A                          + Y + T+GCQMN++DSERMAG L  LG   T D   A ++VLNTC+IR+ AE KVYS LG    RKR    +VTL VAGCVAQQEGE++LRR+PELDLV GPQYANRLGDLL DV  NG Q+ AT+P  I ED +KP+RES+V AWVNVIYGC E+C++C V N  R VEQSR M+++R E+EE    G +EV LLGQNID++GRDM+P+R F++LL  V D  G+ERIRF TSHPRYIS  +V+  A  P +M YFHIP Q+GDN +L+ MRRGYT E Y  +++RIR RIP+  I  D+IVGFPGETEEQF+++LDLM ++KFD + TAAYSPRP TPAA   NQ+PD VK DRL R+NEL   HA ER+LRY+GR+E VLVEE+N K+  QVMGRT  NR V+F+G IAEL+G++VPV++    P+SL G+
Sbjct:   47 VQAVRVSHILLETESLAELALERLRQGDVDFADLAEVASICQATKQDKGQVGWVSLKDDFLDPIMPLEVRE---------AAMALKPGDMTTVRSGRGVHIVKVEDVMALL------TPTASQP-RSKMPGSGQLLAASGLSRLFKKTVGAADGLEGERERESEWRYFVDTMGCQMNKADSERMAGQLESLGARVTDDAKGADIVVLNTCSIRDKAEQKVYSALGPFAARKRS-GKDVTLVVAGCVAQQEGERLLRRVPELDLVMGPQYANRLGDLLEDVA-NGNQVVATEPTFIMEDSTKPRRESSVAAWVNVIYGCNEHCTYCVVPNT-RGVEQSRPMESVRREMEELGALGFKEVTLLGQNIDSWGRDMHPKRKFSDLLHHVADTPGVERIRFVTSHPRYISERVVDAVAEHPSLMEYFHIPFQAGDNEVLRNMRRGYTRERYLHVIDRIRRRIPEVAISADVIVGFPGETEEQFEQTLDLMRQVKFDCLITAAYSPRPHTPAATWPNQLPDDVKEDRLRRINELAAQHAYERNLRYLGRVEEVLVEERNVKNPTQVMGRTRGNRLVFFDGDIAELRGRMVPVRVTEVRPYSLTGR 626          
BLAST of Gcaud2349.t1 vs. uniprot
Match: A0A7S0FYJ0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FYJ0_9RHOD)

HSP 1 Score: 549 bits (1414), Expect = 3.370e-188
Identity = 275/480 (57.29%), Postives = 357/480 (74.38%), Query Frame = 0
Query:  170 VVEEARHVLRTKRERTVSRKN----PNRTKEAGSLTEVPAPLPFTYAIQTLGCQMNRSDSERMAGVLNRLGYLETSDPFRASVLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTEVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVNVIYGCGENCSFCTVGNVVRPVEQSRAMDAIRAEIEEAAKDGIREVVLLGQNIDAYGRDMYPRRTFAELLTFVHDVEGIERIRFTTSHPRYISSNLVNVCATLPKIMPYFHIPPQSGDNTILKEMRRGYTAEAYETIVNRIRERIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAVMKNQVPDAVKSDRLHRMNELVKDHALERSLRYVGRIEHVLVEEKNPKDAQQVMGRTPANRRVYFEGSIAELKGKIVPVKIEHAYPFSLKGKKV 645
            VVE+ARH L+T   +  +  N    P   ++A     +P  +  TY +QT+GCQMN++DSE+M+G L   G+ E  DPFR++V+V NTC+IR+HAE KVYSY+GRH  RK + P EVT+ V+GCVAQQEGEK+LRRIPE+D+V GPQY+NRL +LL  V + G Q+ AT+P+HI EDISKPKR S VTAWVN+IYGC E CS+C V    R +EQSR  D+I+ EI++ A+ G++EVVLLGQNIDAYGRD+ PR + A+LL FVHDV+GIERIRFTTSHPRY++  L+  C  LPK+  YFH+P QSGD+ +LKEM+RGYTA+ ++ I  RIR  +PDA +  D IVGFPGETEE+FQ ++DLM+ I+FD ++TAAYSPRP T AAV   QV + VK +RL R+NE     A +RS RY+GR E +LVEE+N KD  QV+GRT  NR  +F+G+I EL+GK+V VKI+ A  FSL G+ V
Sbjct:    1 VVEDARHTLQTSLSKRGAPVNLTQIPRNQRDA-----IPEMIKGTYCVQTMGCQMNQADSEKMSGELEAAGFKEIDDPFRSNVIVFNTCSIRDHAEQKVYSYVGRHARRKWQNP-EVTIVVSGCVAQQEGEKLLRRIPEVDVVMGPQYSNRLRELLDSVNQ-GNQVCATEPVHIMEDISKPKRNSKVTAWVNIIYGCNERCSYCVVPTT-RGLEQSRPRDSIKEEIKQLAEQGVKEVVLLGQNIDAYGRDLRPRDSLADLLRFVHDVDGIERIRFTTSHPRYMTDRLIKACYELPKLCEYFHVPFQSGDDKVLKEMKRGYTAKRFKQIAERIRMYMPDAALSADAIVGFPGETEEEFQHTIDLMEEIRFDTVHTAAYSPRPNTLAAVWDTQVAEDVKVERLRRINEQTAKDAHDRSQRYLGRTEEILVEERNDKDPTQVLGRTRTNRLTFFKGNIDELRGKLVTVKIKEARTFSLTGELV 472          
BLAST of Gcaud2349.t1 vs. uniprot
Match: A0A6H5KNX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX7_9PHAE)

HSP 1 Score: 551 bits (1419), Expect = 2.930e-185
Identity = 307/638 (48.12%), Postives = 398/638 (62.38%), Query Frame = 0
Query:   72 DIEAIRIRHCRLESKELCDFVWEQVTHQKARLEDLAASLSTCTASKEHGGDLGWWWKDE--------------------------VVPQSTDEFGINDQ-----------------------LLAVALRT-----RPNKVERVETKNGWHVFVVEEARHVLRTKRERTVSRKNPNRTKEAGSLTEVPAPLP------FTYAIQTLGCQMNRSDSERMAGVLNRLGYLETSDPFRASVLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTEVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVNVIYGCGENCSFCTVGNVVRPVEQSRAMDAIRAEIEEAAKDGIREVVLLGQNIDAYGRDMYPRRTFAELLTFVHDVEGIERIRFTTSHPRYISSNLVNVCATLPKIMPYFHIPPQSGDNTILKEMRRGYTAEAYETIVNRIRERIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAVMKNQVPDAVKSDRLHRMNELVKDHALERSLRYVGRIEHVLVEEKNPKDAQQVMGRTPANRRVYFEGSIAELKGKIVPVKIEHAYPFSLKGKKVGLAY 649
            ++EA+ +RH  ++++ L     EQ+  +     +LA+S+S C A++  GG++GW    +                          V+P    + G  +Q                       +L +A RT     +P  V    T  GWHV  +++    + T+   T  +   NR   AG  T     L        +Y ++T+GCQMN +DSERM G +  LG  +T D   ASV VLNTC+IR+HAE KVYSY+G + IRK+K    + + VAGCVAQQEGEK+LRR+PE+DLV GPQYANRLGDLL DV  NG QI ATDP  I ED+SKP+R S+  AWVN+IYGC E+C++C V  V R VEQSR  ++IR E+ E A  G REV LLGQN+DAYGRDM PR +FA+LL +V DV GIER+RF TSHPRY+S ++V+  A LP +   F +P QSGDN +LK MRRGYT   Y  I++RIRE  PDA I GD+IVGFPGETEEQFQ +LDLM+R+KFD +NT +YSPRP T AA+ +NQVP+ VK+DRL R+  L   HA ERS RY+GR+E VLVEE+NPK+A QVMGRT  NR V+  G I ELKGK++  +I    P+SL G   G  Y
Sbjct:  101 NVEAMYVRHILVQTEGLAKTCLEQI-REGVDFGELASSISDCQATRAKGGEVGWASTPQGQRVEPIATSPPKSPQLAVPASAAARVLPAGLSQNGEAEQGSQQQAEEALSGAMADADAGMEEILPLAARTALLDYKPGDVLVTPTGRGWHVIKIDD----VMTRLSATARKAASNRQAGAGLTTSSLRSLQGEGTQALSYFMETMGCQMNVADSERMEGQMADLGIQKTEDKTEASVFVLNTCSIRDHAEQKVYSYVGPYAIRKQK-GENIAIVVAGCVAQQEGEKLLRRVPEIDLVMGPQYANRLGDLLEDV-MNGNQIVATDPSLIMEDVSKPRRGSSTCAWVNIIYGCNEHCTYCVVPGV-RGVEQSRPKESIRQEMVELAAAGYREVTLLGQNVDAYGRDMNPRNSFADLLHYVSDVPGIERVRFVTSHPRYMSLDVVDAVANLPSMAECFMVPFQSGDNEVLKNMRRGYTITRYMRIIDRIRELSPDAAITGDVIVGFPGETEEQFQHTLDLMERVKFDNLNTFSYSPRPNTEAALWENQVPEDVKADRLQRVMRLGCTHAQERSDRYMGRVEEVLVEERNPKNAAQVMGRTRTNRPVFLNGDIGELKGKLIKAEITECRPWSLTGVAQGEPY 730          
BLAST of Gcaud2349.t1 vs. uniprot
Match: A0A7S2S7D0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7D0_9STRA)

HSP 1 Score: 545 bits (1405), Expect = 1.990e-184
Identity = 307/589 (52.12%), Postives = 384/589 (65.20%), Query Frame = 0
Query:   72 DIEAIRIRHCRLESKELCDFVWEQVTHQKARLEDLAASLSTCTASKEHGGDLGWWWKDEVVPQSTDEFGIND----QLL-----AVALRTRPNKVERVETKNGWHVFVVEEARHVLRTK-RERTVSRKNPNRTKEAGSLTEVPAPLPF---TYAIQTLGCQMNRSDSERMAGVLNRLGYLETSDPFR--ASVLVLNTCNIREHAESKVYSYLGRHVIRKRKYPTEVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVNVIYGCGENCSFCTVGNVVRPVEQSRAMDAIRAEIEEAAKDGIREVVLLGQNIDAYGRDMYPRRTFAELLTFVHDVEGIERIRFTTSHPRYISSNLVNVCATLPKIMPYFHIPPQSGDNTILKEMRRGYTAEAYETIVNRIRERI--PDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAVMKNQVPDAVKSDRLHRMNELVKDHALERSLRYVGRIEHVLVEEKNPKDAQQVMGRTPANRRVYFEGSIAELKGKIVPVKIEHAYPFSLKGK 643
            D+ A+R+ H  L +KE+     EQV   +    DLA ++S C  S+E GG +GW              G+ND     LL     A AL  +P  V   ET+ G H+  +E+    L+T+ + R    K P    E  SLTE  + L     TY ++T+GCQMN +D+ERMAG L  LG +  S+  R  A+V+VLNTC+IR+HAE KVYSYLG H  RKR+    V + VAGCVAQQEGE++LRR+PE+DLV GPQY+NR+GDLL DV  NG Q+ ATDP+HI ED++KP+R STV AWVNVIYGC E+C++C V    R VEQSR  +AIR E+E+  K G REV LLGQNIDA+GRDM PR+ F+ELL  V  V GIER+RF TSHPRY+S  +++           FHIP QSGDN +LK MRRGYT E Y  IV RIRE+    D  I GD+IVGFPGETEEQFQ +L L++ +KFD   TAAYSPRP T AA  +NQVP+ VK DRL R+      HALE S RY+ R E V+VE +N K+  QVMGRT  NR+V+F+G I ELKGK V VKI    P+SL G+
Sbjct:   62 DVMAVRVSHVLLHTKEMATACLEQVKSGRD-FNDLALAISICEESREEGGKIGW-------------VGLNDTPVDHLLPAVARAHALEYKPGDVFLTETERGHHLVKIEDIMTRLKTRTKPRKPRLKGPG--NELPSLTEQLSGLSGAKPTYFMETMGCQMNFADTERMAGQLEDLGLVPVSEEERLKANVIVLNTCSIRDHAEQKVYSYLGPHANRKRR-GEPVAIVVAGCVAQQEGEQLLRRVPEVDLVMGPQYSNRIGDLLEDV-MNGNQVVATDPLHIMEDVTKPRRGSTVCAWVNVIYGCNEHCTYCVVPGT-RGVEQSRPREAIRQEVEDLVKQGYREVTLLGQNIDAWGRDMQPRQRFSELLRDVSSVPGIERVRFVTSHPRYMSPRVISAVYEEDSACEMFHIPFQSGDNEVLKNMRRGYTRERYLDIVRRIREKFGDKDVSITGDIIVGFPGETEEQFQNTLALLEEVKFDACMTAAYSPRPNTQAATWENQVPEDVKQDRLQRVKRACDTHALEVSQRYLHRTEEVMVETRNIKNPTQVMGRTRTNRQVFFDGDIDELKGKFVHVKITEVRPYSLSGE 631          
The following BLAST results are available for this feature:
BLAST of Gcaud2349.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J037_9FLOR0.000e+074.88tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
R7QB29_CHOCR1.840e-31165.70Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QN23_CHOCR8.240e-19651.38Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZI68_9RHOD8.810e-19650.33Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A2V3IGB2_9FLOR1.880e-19349.32tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
UPI001E1DDEB41.010e-19063.55LOW QUALITY PROTEIN: tRNA-2-methylthio-N(6)-dimeth... [more]
A0A0G4ERE5_VITBC2.410e-18949.92Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S0FYJ0_9RHOD3.370e-18857.29Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A6H5KNX7_9PHAE2.930e-18548.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2S7D0_9STRA1.990e-18452.12Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006638Elp3/MiaB/NifBSMARTSM00729MiaBcoord: 352..571
e-value: 3.0E-52
score: 189.6
IPR002792TRAM domainPFAMPF01938TRAMcoord: 583..644
e-value: 3.9E-12
score: 46.0
IPR002792TRAM domainPROSITEPS50926TRAMcoord: 582..646
score: 13.300293
NoneNo IPR availablePFAMPF13616Rotamase_3coord: 84..172
e-value: 5.9E-6
score: 26.8
NoneNo IPR availableTIGRFAMTIGR01574TIGR01574coord: 211..644
e-value: 2.3E-125
score: 417.0
NoneNo IPR availableGENE3D3.10.50.40coord: 72..179
e-value: 1.6E-10
score: 43.2
NoneNo IPR availableSFLDSFLDG01082B12-binding_domain_containingcoord: 338..554
e-value: 8.3E-25
score: 82.0
NoneNo IPR availablePANTHERPTHR43020CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1coord: 171..645
NoneNo IPR availableCDDcd01335Radical_SAMcoord: 356..558
e-value: 7.68492E-10
score: 56.9581
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 348..579
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 70..173
IPR023404Radical SAM, alpha/beta horseshoeGENE3D3.80.30.20tm_1862 like domaincoord: 349..585
e-value: 8.3E-79
score: 266.3
IPR005839MethylthiotransferaseTIGRFAMTIGR00089TIGR00089coord: 210..642
e-value: 3.4E-139
score: 462.3
IPR038135Methylthiotransferase, N-terminal domain superfamilyGENE3D3.40.50.12160coord: 210..341
e-value: 7.4E-32
score: 111.7
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 356..528
e-value: 6.8E-23
score: 81.8
IPR007197Radical SAMSFLDSFLDS00029Radical_SAMcoord: 210..645
e-value: 0.0
score: 497.6
IPR007197Radical SAMPROSITEPS51918RADICAL_SAMcoord: 348..579
score: 33.618004
IPR013848Methylthiotransferase, N-terminalPFAMPF00919UPF0004coord: 211..310
e-value: 1.4E-25
score: 89.2
IPR013848Methylthiotransferase, N-terminalPROSITEPS51449MTTASE_Ncoord: 209..326
score: 32.7425
IPR006463tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaBSFLDSFLDF00273(dimethylallyl)adenosine_tRNAcoord: 210..645
e-value: 0.0
score: 497.6
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROSITEPS50198PPIC_PPIASE_2coord: 73..173
score: 11.998443

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_48_length_65905_cov_4.503282contigNODE_48_length_65905_cov_4.503282:37402..39351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2349.t1Gcaud2349.t1Gracilaria caudata M_176_S67 malemRNANODE_48_length_65905_cov_4.503282 37402..39351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2349.t1 ID=Gcaud2349.t1|Name=Gcaud2349.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=650bp
MHSKGAFVPVGFYRQSESWLSSKLSYSPQICSQRIRNVTSAVLDHPKAKS
QTRRPLAPGAPGHRFYEFSPDDIEAIRIRHCRLESKELCDFVWEQVTHQK
ARLEDLAASLSTCTASKEHGGDLGWWWKDEVVPQSTDEFGINDQLLAVAL
RTRPNKVERVETKNGWHVFVVEEARHVLRTKRERTVSRKNPNRTKEAGSL
TEVPAPLPFTYAIQTLGCQMNRSDSERMAGVLNRLGYLETSDPFRASVLV
LNTCNIREHAESKVYSYLGRHVIRKRKYPTEVTLCVAGCVAQQEGEKMLR
RIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRES
TVTAWVNVIYGCGENCSFCTVGNVVRPVEQSRAMDAIRAEIEEAAKDGIR
EVVLLGQNIDAYGRDMYPRRTFAELLTFVHDVEGIERIRFTTSHPRYISS
NLVNVCATLPKIMPYFHIPPQSGDNTILKEMRRGYTAEAYETIVNRIRER
IPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPA
AVMKNQVPDAVKSDRLHRMNELVKDHALERSLRYVGRIEHVLVEEKNPKD
AQQVMGRTPANRRVYFEGSIAELKGKIVPVKIEHAYPFSLKGKKVGLAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006638Elp3/MiaB/NifB
IPR002792TRAM_dom
IPR023404rSAM_horseshoe
IPR005839Methylthiotransferase
IPR038135Methylthiotransferase_N_sf
IPR007197rSAM
IPR013848Methylthiotransferase_N
IPR006463MiaB_methiolase
IPR000297PPIase_PpiC