Gcaud2346.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2346.t1 vs. uniprot
Match: R7QB24_CHOCR (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB24_CHOCR) HSP 1 Score: 199 bits (506), Expect = 2.130e-62 Identity = 99/133 (74.44%), Postives = 115/133 (86.47%), Query Frame = 0
Query: 12 QTSPSGLDAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENLYADIPMGIFVIRGENVMLLGEVDEQKELRLGESMKQVSEREIRKAMAEAREKASPEVRKAIIEWPIPEEF 144
+T+ SG A KLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERL+VE+ YAD+P+GIFVIRGENVMLLGEVDE++EL +G SMKQV+E EIR+A+A +E + R +EWPIPEE+
Sbjct: 81 ETTQSGSGAIKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLTVEDSYADVPIGIFVIRGENVMLLGEVDEERELNVGSSMKQVTEPEIRRALAAIKEDRAARRRGEKVEWPIPEEY 213
BLAST of Gcaud2346.t1 vs. uniprot
Match: A0A507E1X1_9FUNG (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E1X1_9FUNG) HSP 1 Score: 115 bits (289), Expect = 1.690e-30 Identity = 57/104 (54.81%), Postives = 78/104 (75.00%), Query Frame = 0
Query: 23 LPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENLYADIPMGIFVIRGENVMLLGEVDEQKELRLGESMKQVSEREIRKAMAEAREK 126
LPG+ASL + +DK +LV LRD R GWLRS+DQ+ANL+L +TVER V + Y D+ GIFVIRGENV+LLGE+D++KE L +S+K V E+R+A + +E+
Sbjct: 5 LPGSASLVDCVDKKILVILRDSRKLIGWLRSYDQFANLVLQDTVERTYVGDQYGDVYRGIFVIRGENVVLLGEIDKEKETALMKSLKNVPVAEVREAQKQEQER 108
BLAST of Gcaud2346.t1 vs. uniprot
Match: A0A1Z5L2V0_ORNMO (U6 snRNA-associated Sm-like protein LSm1 (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5L2V0_ORNMO) HSP 1 Score: 113 bits (282), Expect = 8.830e-30 Identity = 52/88 (59.09%), Postives = 67/88 (76.14%), Query Frame = 0
Query: 14 SPSGLDAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENLYADIPMGIFVIRGENVMLLGEVDEQKE 101
S + + F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V Y DIP GIF++RGENV+LLGE+DE++E
Sbjct: 2 SQNNMTLFYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKQYGDIPRGIFIVRGENVVLLGEIDEERE 89
BLAST of Gcaud2346.t1 vs. uniprot
Match: A0A293MTH1_ORNER (U6 snRNA-associated Sm-like protein LSm1 (Fragment) n=3 Tax=Ornithodoros TaxID=6937 RepID=A0A293MTH1_ORNER) HSP 1 Score: 113 bits (283), Expect = 1.530e-29 Identity = 62/127 (48.82%), Postives = 89/127 (70.08%), Query Frame = 0
Query: 14 SPSGLDAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENLYADIPMGIFVIRGENVMLLGEVDEQKELRLGESMKQVSEREI---RKAMAEAREKASPEVRKAIIE 137
S + + F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V Y DIP GIF++RGENV+LLGE+D++KE + ++++VS +EI ++ AEA+++ + KA E
Sbjct: 2 SHNNMTLFYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVGKQYGDIPRGIFIVRGENVVLLGEIDQEKERLV--NLEEVSVQEILEVQRLEAEAKQERERQRAKAFKE 126
BLAST of Gcaud2346.t1 vs. uniprot
Match: UPI00142558C8 (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142558C8) HSP 1 Score: 112 bits (281), Expect = 2.820e-29 Identity = 59/104 (56.73%), Postives = 76/104 (73.08%), Query Frame = 0
Query: 23 LPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENLYADIPMGIFVIRGENVMLLGEVDEQKELRLGESMKQVSEREIRKAMAEAREK 126
LPG ASL E+LDK +LV LRDGR G LRS DQ+ANL+L T+ER+ V N Y DIP G+FVIRGENV+LLGE+D +K+ ++ +K+VS EI +A E + K
Sbjct: 7 LPGTASLIEELDKKLLVLLRDGRTLIGTLRSIDQFANLVLHKTIERIHVGNKYGDIPRGVFVIRGENVVLLGEIDSEKDPKV--ELKEVSIDEILEAQREEQVK 108
BLAST of Gcaud2346.t1 vs. uniprot
Match: UPI000C75A328 (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75A328) HSP 1 Score: 112 bits (280), Expect = 3.880e-29 Identity = 53/94 (56.38%), Postives = 76/94 (80.85%), Query Frame = 0
Query: 23 LPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENLYADIPMGIFVIRGENVMLLGEVDEQKELRLGESMKQVSEREI 116
LPG A+L E+LDK ++V LRDGR G+LRS DQ+ANL++ N +ER+ V++ Y DIP+G+FV+RGENV+LLGE++E++EL+ +KQVS +EI
Sbjct: 6 LPGTATLLEELDKKLMVLLRDGRTLIGYLRSVDQFANLVIHNCIERIHVKDEYGDIPLGVFVVRGENVVLLGEIEEKEELK--GKLKQVSLKEI 97
BLAST of Gcaud2346.t1 vs. uniprot
Match: A0A7S3GS20_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GS20_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.630e-29 Identity = 54/103 (52.43%), Postives = 79/103 (76.70%), Query Frame = 0
Query: 19 DAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENLYADIPMGIFVIRGENVMLLGEVDEQKELRLGESMKQVSEREIRKAMA 121
++ LPGAASL EQ+D +L+ LRDGRN G LRSFDQY NLIL++T ER+ ++ Y DIP+G+F++RG+N++LLGEVDE KE +++++VS E+ + +A
Sbjct: 6 ESLYLPGAASLAEQIDTKILIVLRDGRNLVGILRSFDQYVNLILEDTYERVIFQDKYCDIPLGLFLVRGDNLILLGEVDEDKEA--SQNLEKVSPAELTELLA 106
BLAST of Gcaud2346.t1 vs. uniprot
Match: A0A6P7UPI0_IXOSC (U6 snRNA-associated Sm-like protein LSm1 n=4 Tax=Ixodes TaxID=6944 RepID=A0A6P7UPI0_IXOSC) HSP 1 Score: 111 bits (278), Expect = 7.560e-29 Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = 0
Query: 21 FKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENLYADIPMGIFVIRGENVMLLGEVDEQKE 101
F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V Y DIP GIFV+RG+NV+LLGE+DE KE
Sbjct: 4 FYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEIDEAKE 84
BLAST of Gcaud2346.t1 vs. uniprot
Match: L7M3M9_RHIPC (U6 snRNA-associated Sm-like protein LSm1 n=13 Tax=Ixodidae TaxID=6939 RepID=L7M3M9_RHIPC) HSP 1 Score: 111 bits (278), Expect = 7.560e-29 Identity = 53/81 (65.43%), Postives = 63/81 (77.78%), Query Frame = 0
Query: 21 FKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENLYADIPMGIFVIRGENVMLLGEVDEQKE 101
F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V Y DIP GIFVIRG+NV+LLGE+DE KE
Sbjct: 4 FYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHQTIERIHVGRQYGDIPRGIFVIRGDNVVLLGEIDEDKE 84
BLAST of Gcaud2346.t1 vs. uniprot
Match: A0A7R8D4X3_LEPSM (U6 snRNA-associated Sm-like protein LSm1 n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8D4X3_LEPSM) HSP 1 Score: 111 bits (277), Expect = 1.170e-28 Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0
Query: 23 LPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENLYADIPMGIFVIRGENVMLLGEVDEQKELRLGESMKQVSEREIRKA 119
LPG AS+ E+LDK ++V LRDGR G LRS DQYANL+L +ER+ V N Y DIP GIFV+RGENV+LLGE+DE +E +++VS EI +A
Sbjct: 6 LPGTASIMEELDKKLMVLLRDGRTLIGILRSVDQYANLVLHRAIERIHVGNDYGDIPRGIFVVRGENVVLLGEIDEVRESEANSKLREVSLEEILEA 102 The following BLAST results are available for this feature:
BLAST of Gcaud2346.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2346.t1 ID=Gcaud2346.t1|Name=Gcaud2346.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=145bpback to top |