Gcaud2316.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2316.t1
Unique NameGcaud2316.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length221
Homology
BLAST of Gcaud2316.t1 vs. uniprot
Match: A0A2V3IUC6_9FLOR (CMD domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUC6_9FLOR)

HSP 1 Score: 344 bits (882), Expect = 3.390e-118
Identity = 164/220 (74.55%), Postives = 196/220 (89.09%), Query Frame = 0
Query:    1 MTNLYPLLAKLPKAPPTICTQFRTILLAVGHVARGDVHGVTSAFRFIDQQHHKKAYELSVVQAMPFIGIPRALHAAAALQILGVVGDPEQSTLASIADLEQKGEHTFNQIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLRERELAAVAALSIDRYASVQLASHIRGAFKVGASYDEIRMTVEHARVLADDDDWRSAEAVLQTWDRARYAL 220
            M+ LYPLL+KLPKAP TIC QFRTILLAVGHVARGDVHGVTSAF+ +D   H K YEL++VQAMPF+GIPRALHAAA+L++ GVVG  ++S + SI +L ++G+ TFN+IYGRNA RV++RL+QFHPFVEQW+MTCNYGAMLSR+DA+LRERELAAVAALS+DR A+VQLASHIRGA KVGASY+E+RMTVEHARVL  +DDW +AEAVLQ ++RARYAL
Sbjct:    1 MSKLYPLLSKLPKAPSTICPQFRTILLAVGHVARGDVHGVTSAFQHLDGSFHNKGYELAIVQAMPFVGIPRALHAAASLEVAGVVGHADESRMVSIGELRERGDSTFNEIYGRNALRVKRRLRQFHPFVEQWIMTCNYGAMLSREDASLRERELAAVAALSMDRCAAVQLASHIRGALKVGASYEEVRMTVEHARVLTSEDDWSTAEAVLQRYERARYAL 220          
BLAST of Gcaud2316.t1 vs. uniprot
Match: A0A800KM50_9BACT (CMD domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800KM50_9BACT)

HSP 1 Score: 77.0 bits (188), Expect = 8.640e-14
Identity = 57/167 (34.13%), Postives = 85/167 (50.90%), Query Frame = 0
Query:   54 KAYELSVVQAMPFIGIPRALHAAAALQILGVVGDPEQSTLASIADLEQKGEHTFNQIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLRERELAAVAALSIDRYASVQLASHIRGAFKVGASYDEIRMTVEHARVLADDDDWRSAEAVLQTWDRARYAL 220
            +A+  +++Q   F G PR + A   L   G +G      L    DL  +G   F  IY   A  V +RL +FHP + +W+    YG +LSR       REL AVAAL++   A  QLASH+RGA ++G++ + +R       VL   +D    EA+    +RAR ++
Sbjct:   44 RAWREALLQCHLFAGFPRVVEAFETLSRHGGMGAVPAEELEIEGDLA-RGRKLFESIYADLAPEVEQRLGEFHPDLSRWISEHAYGRVLSRPGLEPHVRELCAVAALTVTGQAR-QLASHVRGAVRLGSNTEALRA------VLRRVEDHTPPEAI----ERARASV 198          
BLAST of Gcaud2316.t1 vs. uniprot
Match: A0A3N5Q006_9BACT (Uncharacterized protein n=1 Tax=Ignavibacteriales bacterium TaxID=2049428 RepID=A0A3N5Q006_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 4.300e-12
Identity = 47/148 (31.76%), Postives = 84/148 (56.76%), Query Frame = 0
Query:   53 KKAYELSVVQAMPFIGIPRALHAAAAL-QILGVVGDPEQSTLASIADLEQKGEHTFNQIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLRERELAAVAALSIDRYASVQLASHIRGAFKVGASYDEIRMTVEHARVLAD 199
            +K YE+ ++Q+  F G P AL A     +I       ++  L SI  L+++GE T  +IYG    ++ + +  F P + ++++   YG +LSR+  +L+ERELA ++ LS+ +Y   QL SHI GA+++G     +   ++  R+L +
Sbjct:   41 RKIYEV-LLQSYLFAGFPSALIALKTFSKIFPAFRTNKEILLYSI--LKKRGEKTCKKIYGDKFNKLIENVNSFSPDLAEYIIIEGYGKILSRNQLSLKERELAIISVLSVLKYEE-QLYSHINGAYRLGIKIPVVCELIDSLRILGN 184          
BLAST of Gcaud2316.t1 vs. uniprot
Match: A0A2D5XR95_9BACT (CMD domain-containing protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XR95_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 6.000e-9
Identity = 51/177 (28.81%), Postives = 81/177 (45.76%), Query Frame = 0
Query:   13 KAPPTICTQFRTILLAVGHVARGDVHGVTSAFRFIDQQHHKKAYELSVVQAMPFIGIPRALHAAAALQILGVVGD--PEQSTLASIADLEQKGEHTFNQIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLRERELAAVAALSIDRYASVQLASHIRGAFKVGASYDEI 187
             A P +  +   ++     + +GD H +    R        + +  +++Q+  F GIPR + A A L   G +    PE+     I    ++G+  F++IYG     V + L + HP +    +   Y  +LSR       REL AV AL+       QLASH RGA ++GA  +EI
Sbjct:    2 SAAPGLTLETERLVRLTIAICQGDWHSLRILRREAPPGEPDRGWREALLQSHLFAGIPRMVEACAVLLAEGGLDSCGPEEIEAQPIDP--ERGQRLFDEIYGDTGPAVTEALARAHPEILAITLDHAYKRVLSRPGLAGATRELLAVGALAAGNQRR-QLASHARGALRLGALPEEI 175          
BLAST of Gcaud2316.t1 vs. uniprot
Match: A0A7W7VSL3_KITKI (4-carboxymuconolactone decarboxylase n=1 Tax=Kitasatospora kifunensis TaxID=58351 RepID=A0A7W7VSL3_KITKI)

HSP 1 Score: 63.5 bits (153), Expect = 1.990e-8
Identity = 42/147 (28.57%), Postives = 73/147 (49.66%), Query Frame = 0
Query:   59 SVVQAMPFIGIPRALHA-AAALQILGVVGDPEQSTLASIA-----------DLEQKGEHTFNQIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLRERELAAVAALSIDRYASVQLASHIRGAFKVGASYDEIRMTVEH 193
            +++  + + G+P AL+    A ++      PEQ+ L  +A           D  ++G     +I G    +V   L+   P + ++++  ++G + SR   TL+ERELA+VAA +    A+ QL  HI G   VG S +E+  T+ H
Sbjct:  107 TIIHMLVYAGVPAALNGMTVAREVFAERPSPEQTPLGDLARSQVRPAQTSEDRYRRGLAALKEIDGHAGEQVVAALQDIAPDLGRYIIEFSFGDIYSRTGLTLKERELASVAACTALGTAAPQLRVHIHGLLNVGGSREEVVETITH 253          
BLAST of Gcaud2316.t1 vs. uniprot
Match: F4CE69_SPHS2 (Carboxymuconolactone decarboxylase n=1 Tax=Sphingobacterium sp. (strain 21) TaxID=743722 RepID=F4CE69_SPHS2)

HSP 1 Score: 59.3 bits (142), Expect = 6.110e-7
Identity = 42/137 (30.66%), Postives = 72/137 (52.55%), Query Frame = 0
Query:   60 VVQAMPFIGIPRALHAAAA-LQIL------GVVGDPEQS-TLASIADLEQKGEHTFNQIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLRERELAAVAALSIDRYASVQLASHIRGAFKVGASYDEIR 188
            ++Q   + G P +++A  A +++L      G+  D  +S T+ S  D  + GE T +++    A +++     F P + ++ +   Y  +LSRD+ +LR RE+A VAAL+    A  QL  HI  A  VG S  E++
Sbjct:  121 ILQMSVYSGFPSSINAMNAFMEVLDERQNQGIKDDIGKSPTVLSQTDRRKLGEQTLSKLDSVQADKMKAAYNDFSPELLKFTLEYGYADILSRDNLSLRHREIATVAALTALGNAQPQLKFHINAALNVGVSEIEVK 257          
BLAST of Gcaud2316.t1 vs. uniprot
Match: A0A6I5DG49_9ACTN (Carboxymuconolactone decarboxylase n=1 Tax=Streptomyces sp. SID5474 TaxID=2690300 RepID=A0A6I5DG49_9ACTN)

HSP 1 Score: 56.6 bits (135), Expect = 4.960e-6
Identity = 35/98 (35.71%), Postives = 52/98 (53.06%), Query Frame = 0
Query:  101 QKGEHTFNQIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLRERELAAVAALSIDRYASVQLASHIRGAFKVGASYDEIRMTVEHARVLA 198
            ++G     Q+ G +   V + L    P + ++ +   YG + SR   TLRER+LA VAAL+   +A+ QL  H+ GA  VG +  EI  T+ H  V A
Sbjct:   17 ERGLAVLRQVAGTDRPAVLESLADIAPDLARYTVEFGYGDIYSRPGLTLRERQLANVAALAAIGHAAPQLRFHLTGALNVGCTRREIVETLIHVCVYA 114          
The following BLAST results are available for this feature:
BLAST of Gcaud2316.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IUC6_9FLOR3.390e-11874.55CMD domain-containing protein n=1 Tax=Gracilariops... [more]
A0A800KM50_9BACT8.640e-1434.13CMD domain-containing protein n=1 Tax=Planctomycet... [more]
A0A3N5Q006_9BACT4.300e-1231.76Uncharacterized protein n=1 Tax=Ignavibacteriales ... [more]
A0A2D5XR95_9BACT6.000e-928.81CMD domain-containing protein n=2 Tax=Planctomycet... [more]
A0A7W7VSL3_KITKI1.990e-828.574-carboxymuconolactone decarboxylase n=1 Tax=Kitas... [more]
F4CE69_SPHS26.110e-730.66Carboxymuconolactone decarboxylase n=1 Tax=Sphingo... [more]
A0A6I5DG49_9ACTN4.960e-635.71Carboxymuconolactone decarboxylase n=1 Tax=Strepto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003779Carboxymuconolactone decarboxylase-likePFAMPF02627CMDcoord: 131..211
e-value: 1.6E-7
score: 31.3
IPR029032AhpD-likeGENE3D1.20.1290.10coord: 20..216
e-value: 2.7E-26
score: 94.5
IPR029032AhpD-likeSUPERFAMILY69118AhpD-likecoord: 99..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_845_length_17097_cov_4.330472contigNODE_845_length_17097_cov_4.330472:11538..12200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2316.t1Gcaud2316.t1Gracilaria caudata M_176_S67 malemRNANODE_845_length_17097_cov_4.330472 11538..12200 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2316.t1 ID=Gcaud2316.t1|Name=Gcaud2316.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=221bp
MTNLYPLLAKLPKAPPTICTQFRTILLAVGHVARGDVHGVTSAFRFIDQQ
HHKKAYELSVVQAMPFIGIPRALHAAAALQILGVVGDPEQSTLASIADLE
QKGEHTFNQIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLR
ERELAAVAALSIDRYASVQLASHIRGAFKVGASYDEIRMTVEHARVLADD
DDWRSAEAVLQTWDRARYAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003779CMD-like
IPR029032AhpD-like