Gcaud2304.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2304.t1
Unique NameGcaud2304.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length131
Homology
BLAST of Gcaud2304.t1 vs. uniprot
Match: A0A7S2GES5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2GES5_9DINO)

HSP 1 Score: 82.4 bits (202), Expect = 1.360e-17
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0
Query:   42 LCTANAICPHYAEAYKNIGVLLRDQGDIDLAIKHYERCYEIDPRADMAAQNRLHALNYSEEWSKAQVYEQHLAWGTAFQKRI 123
            L  A A+ P YAEAY N+G L  DQGD++ A++ YERC E+ P +   +QNRL ALNY+ + S   VYE H AW   F + +
Sbjct:    1 LARAVAVAPTYAEAYNNLGWLFWDQGDLEQALRMYERCIELAPNSKNPSQNRLLALNYAPDVSPQLVYEAHRAWAERFSREL 82          
BLAST of Gcaud2304.t1 vs. uniprot
Match: A0A2V3IT93_9FLOR (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT93_9FLOR)

HSP 1 Score: 86.7 bits (213), Expect = 3.150e-17
Identity = 37/46 (80.43%), Postives = 44/46 (95.65%), Query Frame = 0
Query:   81 EIDPRADMAAQNRLHALNYSEEWSKAQVYEQHLAWGTAFQKRIDDE 126
            ++DPRADMAAQNRLHAL+YSE W+KAQVYEQH+AWG +FQ+RIDDE
Sbjct:  437 QMDPRADMAAQNRLHALSYSERWTKAQVYEQHVAWGASFQRRIDDE 482          
BLAST of Gcaud2304.t1 vs. uniprot
Match: M2XWS2_GALSU (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XWS2_GALSU)

HSP 1 Score: 82.4 bits (202), Expect = 9.690e-16
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0
Query:   64 RDQGDIDLAIKHYERCYEIDPRADMAAQNRLHALNYSEEWSKAQVYEQHLAWGTAFQKRIDDE 126
            RD+GDI  AI+HYE+C   DPRA+M AQNRLHALNY++E+    +Y +H  WG  F KRI  E
Sbjct:  691 RDEGDIHGAIEHYEQCLRTDPRAEMTAQNRLHALNYADEYDVETIYHEHKKWGDRFLKRIQKE 753          
BLAST of Gcaud2304.t1 vs. uniprot
Match: A0A5J4YV26_PORPP (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YV26_PORPP)

HSP 1 Score: 73.2 bits (178), Expect = 1.670e-12
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 0
Query:   65 DQGDIDLAIKHYERCYEIDPRADMAAQNRLHALNYSEEWSKAQVYEQHLAWGTAFQKRIDDE 126
            ++GDI  AI  Y+RC E++P  DMAAQNRLHALNY E  S   ++++H +WG  FQ+R++ E
Sbjct:  637 EEGDILRAISCYDRCLELEPSNDMAAQNRLHALNYVEGLSTNDIFKEHESWGRRFQERVESE 698          
BLAST of Gcaud2304.t1 vs. uniprot
Match: Q30TF7_SULDN (TPR repeat n=1 Tax=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) TaxID=326298 RepID=Q30TF7_SULDN)

HSP 1 Score: 60.1 bits (144), Expect = 1.710e-8
Identity = 38/86 (44.19%), Postives = 48/86 (55.81%), Query Frame = 0
Query:    4 ALECYKRALERDRQHHQTHNEIAVVYTLLGDIDSASEHLCTANAICPHYAEAYKNIGVLLRDQGDIDLAIKHYERCYEIDPRADMA 89
            ALECYK+ALE DR++   HN IA +Y L  +  SA  HL  + +I       Y N G LL D   ID A + Y++  EID  AD A
Sbjct:   97 ALECYKKALEGDRENEFIHNSIASIYRLKEEFVSAKMHLNASLSIDNKNPITYYNYGNLLVDMKHIDEAKEMYKKALEID--ADFA 180          
BLAST of Gcaud2304.t1 vs. uniprot
Match: L0FD79_DESDL (Tetratricopeptide repeat protein n=2 Tax=Desulfitobacterium dichloroeliminans TaxID=233055 RepID=L0FD79_DESDL)

HSP 1 Score: 56.6 bits (135), Expect = 1.570e-7
Identity = 32/108 (29.63%), Postives = 55/108 (50.93%), Query Frame = 0
Query:    1 MQKALECYKRALERDRQHHQTHNEIAVVYTLLGDIDSASEHLCTANAICPHYAEAYKNIGVLLRDQGDIDLAIKHYERCYEIDPRADMAAQNRLHALNYSEEWSKAQV 108
            +Q+A E + R L+   +    HN++ VVY    D   A      A  +  H   A+ N+G + R  G+++ AI++Y+R  EIDP   + A+N L  +     WS +++
Sbjct:   29 LQEAEEDFLRYLDECPEDAMGHNKLGVVYGKFHDFTRAKACFMNAIELDEHCTHAWNNLGNIARQDGELEQAIRYYQRAVEIDPLNPIPAKN-LKTVQRQATWSPSRI 135          
BLAST of Gcaud2304.t1 vs. uniprot
Match: A0A3M2A1Q8_9BACT (Tetratricopeptide repeat protein n=1 Tax=Candidatus Dadabacteria bacterium TaxID=2080303 RepID=A0A3M2A1Q8_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 1.370e-6
Identity = 31/91 (34.07%), Postives = 50/91 (54.95%), Query Frame = 0
Query:    4 ALECYKRALERDRQHHQTHNEIAVVYTLLGDIDSASEHLCTANAICPHYAEAYKNIGVLLR-DQGDIDLAIKHYERCYEIDPRADMAAQNR 93
            A+E Y +ALE D        + A++Y  +GD   A         + P++  +  N+GV+LR D GD++ A+K ++R  E +P ADMA + R
Sbjct:   99 AIEAYTKALELDPNDPDVITDRAIMYRRMGDFQKAXXXXXXXXXMAPNHLNSLLNLGVVLRYDLGDLEGAMKAWQRYLERNPPADMAEKIR 189          
BLAST of Gcaud2304.t1 vs. uniprot
Match: A0A1M7TFV2_9FIRM (TPR repeat-containing protein n=1 Tax=Desulfitobacterium chlororespirans DSM 11544 TaxID=1121395 RepID=A0A1M7TFV2_9FIRM)

HSP 1 Score: 53.5 bits (127), Expect = 1.900e-6
Identity = 29/105 (27.62%), Postives = 56/105 (53.33%), Query Frame = 0
Query:    4 ALECYKRALERDRQHHQTHNEIAVVYTLLGDIDSASEHLCTANAICPHYAEAYKNIGVLLRDQGDIDLAIKHYERCYEIDPRADMAAQNRLHALNYSEEWSKAQV 108
            A E ++  L+   +    HN++ VVY  L D++ A      A  +  +   A+ N+G + R  G++D AI++Y++  +IDP   + A+N L  +    +WS +++
Sbjct:   21 AEEAFQSYLQEHPEDALGHNKLGVVYGRLQDMEKAKACFLKAIELDKNCIHAWNNLGNIARQDGELDQAIRYYQKAVDIDPINPIPAKN-LRTVQRQAKWSFSRI 124          
The following BLAST results are available for this feature:
BLAST of Gcaud2304.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A7S2GES5_9DINO1.360e-1747.56Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A2V3IT93_9FLOR3.150e-1780.43Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
M2XWS2_GALSU9.690e-1657.14Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
A0A5J4YV26_PORPP1.670e-1251.61Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
Q30TF7_SULDN1.710e-844.19TPR repeat n=1 Tax=Sulfurimonas denitrificans (str... [more]
L0FD79_DESDL1.570e-729.63Tetratricopeptide repeat protein n=2 Tax=Desulfito... [more]
A0A3M2A1Q8_9BACT1.370e-634.07Tetratricopeptide repeat protein n=1 Tax=Candidatu... [more]
A0A1M7TFV2_9FIRM1.900e-627.62TPR repeat-containing protein n=1 Tax=Desulfitobac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 53..86
e-value: 2.1E-6
score: 37.3
coord: 19..52
e-value: 15.0
score: 13.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 53..86
score: 12.0069
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..56
e-value: 6.1E-11
score: 44.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 57..127
e-value: 2.8E-10
score: 42.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..115
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 53..84
e-value: 3.2E-9
score: 36.2
NoneNo IPR availablePANTHERPTHR44835UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATEDcoord: 2..121
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 53..85
score: 9.597424

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_838_length_17196_cov_5.011166contigNODE_838_length_17196_cov_5.011166:3596..3988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2304.t1Gcaud2304.t1Gracilaria caudata M_176_S67 malemRNANODE_838_length_17196_cov_5.011166 3596..3988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2304.t1 ID=Gcaud2304.t1|Name=Gcaud2304.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=131bp
MQKALECYKRALERDRQHHQTHNEIAVVYTLLGDIDSASEHLCTANAICP
HYAEAYKNIGVLLRDQGDIDLAIKHYERCYEIDPRADMAAQNRLHALNYS
EEWSKAQVYEQHLAWGTAFQKRIDDESASC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR001440TPR_1