Gcaud2287.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2287.t1
Unique NameGcaud2287.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length476
Homology
BLAST of Gcaud2287.t1 vs. uniprot
Match: A0A2V3ILX7_9FLOR (WD-40 repeat-containing protein MSI4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILX7_9FLOR)

HSP 1 Score: 746 bits (1927), Expect = 6.520e-269
Identity = 350/474 (73.84%), Postives = 400/474 (84.39%), Query Frame = 0
Query:    1 MVANASSDARGKRTIPVGSLNRNTRFKLWKEQDVPILYDWISSRPLIWPSVAVQWGAPIEDSRKERAPNNHTFSNRAIYLSERTGDATRDPNTLLQFDVRVIHELTNKPSEVARPWADEAVVTDRSDSNSSRDFVLRKRILHPGEVNRIRLISRDVVVTHTDSPDLFVWDFKRQPDRKPREVSPSSPDCTLVGHASNAEYAIDVAGYPGTDEDKWVASGGSDSSVLLWRMEDYQSFGQELKPFVRMTGSNGISRPAGHTEHIEDVSFCGKQRNVICSVGRDEALFLWDVRAPQSPTTYVRKAHNGDINCCDYGGLCENHIVTGGEDKQVRLWDTRKLKGSEGEPQPLRELRGHTEAITNLMWNRNVENVLASGAVDGQVLIWRIGDDHSHRQLDSAYYDISPELLFKHIGHSINDENIWDLQWLPSSSDPWCIASLSET-GSGGSTLQVWRISDIIHRPAEEVAADLKRYSRSR 473
            MV NA+  +  +R   VGSLN ++RFKLWKEQ VP+LYDW+SSRPL+WPS AVQWGA IEDSR++RAPNNHTFSN A+YL+ERTG+AT DPNTLLQF++RV+HE TNKPS+VARPWA+EAVVTD+SD+NSSRDF LRKRI+HPGEVNRIRLISRDVVVTHTDSP LFVWDF++QPDRK REVS + PD TL+GH+SNAEYAIDVA  PG D DKWV SGG D +VLLWRM+DYQS GQ L PFVRM GS+GI  P GHT HIEDVSFCGKQRN + SVGRD AL LWDVRAPQSPT +V KAH GDINCCD+GG+CE  I TGGEDK VR+WDTRKLK +  EPQP+R LRGHT  ITN+MWNRNV NV ASG  DGQVL+W+I D    RQ +S +YD SPEL+F+HIGH I D  I DL+WLP SSDPWCIASLSET GSGGSTLQVWRISDI++RP EEVAADL++++R R
Sbjct:    1 MVVNAAHRS-SRRPAAVGSLNSSSRFKLWKEQHVPLLYDWLSSRPLVWPSAAVQWGASIEDSRRDRAPNNHTFSNHAVYLAERTGNATTDPNTLLQFEIRVVHEYTNKPSDVARPWAEEAVVTDQSDANSSRDFALRKRIIHPGEVNRIRLISRDVVVTHTDSPHLFVWDFRKQPDRKAREVSHNIPDMTLMGHSSNAEYAIDVANAPGDDGDKWVLSGGKDCAVLLWRMQDYQSSGQFLNPFVRMAGSHGIKNPVGHTGHIEDVSFCGKQRNTVSSVGRDAALLLWDVRAPQSPTAFVNKAHRGDINCCDFGGICEYFIGTGGEDKVVRIWDTRKLKSTNDEPQPVRMLRGHTNEITNIMWNRNVSNVCASGGDDGQVLVWKIEDTQLQRQAESQHYDASPELIFRHIGHGIADAKISDLEWLPCSSDPWCIASLSETFGSGGSTLQVWRISDIVYRPKEEVAADLRQFARGR 473          
BLAST of Gcaud2287.t1 vs. uniprot
Match: R7QKR8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKR8_CHOCR)

HSP 1 Score: 528 bits (1359), Expect = 1.460e-182
Identity = 253/468 (54.06%), Postives = 325/468 (69.44%), Query Frame = 0
Query:   16 PVGSLNRNTRFKLWKEQDVPILYDWISSRPLIWPSVAVQWGA--PIEDSRKERA--PNNHTFSNRAIYLSERTGDATRDPNTLLQFDVRVIHELTNKPSEVARPWADEAVVTDRSDSNSSRDFVLRKRILHPGEVNRIRLISRDVVVTHTDSPDLFVWDFKRQPDRKPREVSPSSPDCTLVGHASNAEYAIDVAGYPGTDEDK-----WVASGGSDSSVLLWRMEDYQSFGQELKPFVRMTGSNGISRPAGHTEHIEDVSFCGKQRNVICSVGRDEALFLWDVRAPQSPTTYVRKAHNGDINCCDYGGLCENHIVTGGEDKQVRLWDTRKLKGSEGEPQPLRELRGHTEAITNLMWNRNVENVLASGAVDGQVLIWRIGDDHSHRQLDSAYYDISPELLFKHIGHSINDENIWDLQWLPSSSDPWCIASLSET-GSGGSTLQVWRISDIIHRPAEEVAADLKRYSRSR 473
            PVGSLN + RF++WK+Q VP+LYDW+SSR L+WP  A++WGA  P E+  +ER    N      RA+YL+ERTG +  DPNTLL FDV+V  EL+ KP ++A+PW +EAVV +R+D  S+R F LRKRI+HPGEVNRIRL +  VV+THTD+P LFVWDF  QP R   E++ S P  TLVGH  +A+YA+DVA  P  D D      W+ SGG D SVL+W ++DYQS G EL P  RM G   +S   GHT  +EDVSF    RN++ SVGRD A+ LWD R    PT+ VRKAH GDINCCD GG  +  I+TGG D  +++WD R L  + GE +P++ L GH+  +TN+MWN+ V   LASG  DGQVL+W I +        S  Y +SPEL+F+H+GH+ +   I D +W PS SDPWCIASLSET G GGST+Q+WRISD+I+R  EEVAADL++++RSR
Sbjct:    7 PVGSLNADARFEIWKDQHVPLLYDWLSSRNLVWPHEALRWGALSPDENRSRERTVISNGAPSITRALYLAERTGPSKNDPNTLLHFDVKVTPELSCKPQDIAKPWLNEAVVLERADQMSTRSFWLRKRIIHPGEVNRIRLAAPGVVITHTDNPHLFVWDFNMQPARAKDEMTASVPTVTLVGHHDDADYALDVAPPPNLDSDAGQADTWIVSGGRDCSVLVWCLKDYQSMGPELMPRARMVGGRNMSPDLGHTNIVEDVSFNSHDRNIVVSVGRDSAMMLWDTRTTARPTSTVRKAHVGDINCCDAGGTDQYLIITGGSDHLIKVWDRRYLTNALGERKPIKTLHGHSNQVTNVMWNKYVPATLASGGEDGQVLLWNIKETDRRPAFSSGLYSVSPELMFRHVGHTQSPSKIVDFEWHPSESDPWCIASLSETVGEGGSTVQIWRISDLIYREKEEVAADLRQHARSR 474          
BLAST of Gcaud2287.t1 vs. uniprot
Match: A0A7S1TIN6_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIN6_9RHOD)

HSP 1 Score: 310 bits (793), Expect = 7.910e-94
Identity = 175/455 (38.46%), Postives = 244/455 (53.63%), Query Frame = 0
Query:   15 IPVGSLNRNTRFKLWKEQDVPILYDWISSRPLIWPSVAVQWGAPIEDSRKERAPNNHTFSNRAIYLSERTGDATRDPNTLLQFDVRVIHELTNKPSEVARPWADEAVVTDRSDSNSSRDFVLRKRILHPGEVNRIRLISRDVVVTHTDSPDLFVWDFKRQPDRKPREVSP---SSPDCTLVGHASNAEYAIDVAGYPGTDEDKWVASGGSDSSVLLWRMEDYQSFGQELKPFVRMTGSNGISRPAGHTEHIEDVSFCGKQRNVICSVGRDEALFLWDVRAPQSPTTYVRKAHNGDINCCDYGGLCENHIVTGGEDKQVRLWDTRKLKGSEGEPQPLRELRGHTEAITNLMWNRNVENVLASGAVDGQVLIWRIGDDHSHRQLDSAYYDISPELLFKHIGHSINDENIWDLQWLPSSSDPWCIASLSETGSGGSTLQVWRISDIIHRPAEEVAADL 466
            + +G  +   R++ WKEQ VP+LYDW+ S+   WPS  VQW         E     HT+  R + L+ERTGD   D NTLL   VRV +E   +   VA  W+D     D       +DFV+ KR++HPGE+NR+R     +V+THTD PD+ VW  + QP  +   V     S PD  L GH  NAEYAI      GT    WVASGGSD  V++W ++D+ S      P + +     +S   GH   +EDVSF      ++CSVG D  + +WD RA + P   V  AH  DINC D+  L    I TGG D  VR+WD R L   +G+  PL     H   +  + W+   ++VLAS + DG VL+W +      + + S+   + P+L+F+H GH      + D QW P  SDPW I S+SE  + GST+Q+WR+ D+I+R  + V  ++
Sbjct:  341 VAIGYGSELVRYQHWKEQHVPLLYDWLLSQKFCWPSACVQWAPGSGVCTGE----GHTY--RTVLLTERTGDI--DANTLLVAKVRVANERYTRADAVALKWSD-----DYEKPLPRQDFVVTKRLVHPGEINRLRSPKPGMVITHTDGPDVLVWFLEHQPHIREGNVGEQESSKPDIVLRGHEENAEYAIATRIVDGT----WVASGGSDRRVVIWNVDDFDS---TTSPKLELDCRFKLS---GHLATVEDVSFHPDANLMLCSVGDDRMMCIWDTRASKFPVARVEGAHGDDINCVDWNQLEAYLIATGGGDNLVRVWDQRNLASVQGKANPLFSFEQHLRQVNEVSWHSTDKSVLASCSHDGDVLVWNLARTEL-QHVPSSSVSVPPQLMFRHKGHQ---GVVADFQWNPDPSDPWLIVSVSED-TEGSTVQIWRMFDLIYRAKDHVVKEI 767          
BLAST of Gcaud2287.t1 vs. uniprot
Match: A0A1Q3CBT1_CEPFO (WD40 domain-containing protein/CAF1C_H4-bd domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CBT1_CEPFO)

HSP 1 Score: 280 bits (716), Expect = 2.170e-85
Identity = 167/465 (35.91%), Postives = 247/465 (53.12%), Query Frame = 0
Query:   25 RFKLWKEQDVPILYDWISSRPLIWPSVAVQWGAPIEDSRKERAPNNHTFSNRA-IYLSERTGDATRDPNTLLQFDVRVIHELTNKPSEVARPWADEAVVTDRSDSNSSRDFVLR-KRILHPGEVNRIRLISRD--VVVTHTDSPDLFVWDFKRQPDRKP-REVSPSSPDCTLVGHASNAEYAIDVAGYPGTDEDKWVASGGSDSSVLLWRMEDYQSFGQELKPFVR------------MTGSNGISRPAGHTEHIEDVSFCGKQRNVICSVGRDEALFLWDVRAPQSPTTYVRKAHNGDINCCDYGGLCENHIVTGGEDKQVRLWDTRKLKGSEGEPQPLRELRGHTEAITNLMWNRNVENVLASGAVDGQVLIWRIGDDHSHRQLDSAYYDISPELLFKHIGHSINDENIWDLQWLPSSSDPWCIASLS---ETGSGGSTLQVWRISDIIHRPAEEVAADLKRY 469
            ++  WK   VP+LYDW+++  L+WPS++ +WG  +E +         T+ NR  +YLSE+T  +   PNTL+         + N   EV +P    A    + +  +   FV + K I+HPGEVNRIR + ++  +V THTDSPD+ +WD + QP+R      + S PD  L GH  NAE+A+ +        + +V SGG D SV+LW ++DY S G  +K   +              G  G+    GH + +EDV+FC       CSVG D  L LWD R   SP   V KAH+ D++C D+     N I+TG  D  VR++D R L  S G   P+ +  GH  A+  + W+ +  +V  S A DG + IW         +  +   +  P L F+H GH    + + D  W  ++SDPW I S+S   ET  GG TLQ+WR+SD+I+RP +EV A+L+++
Sbjct:   55 KYTQWKSL-VPVLYDWLANHNLVWPSLSCRWGPQLEQA---------TYKNRQRLYLSEQTDGSV--PNTLV---------IAN--CEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMC-----PTEPFVLSGGKDKSVVLWSIQDYISGGSVVKQNAKPGEGTDKSADGPAIGPRGVYN--GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARIGTSPAVKVEKAHDADLHCVDWNPHDNNFILTGSADNSVRMFDRRNLT-SNGIGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVERAARTPNSPPGLFFQHAGHR---DKVVDFHW--NASDPWTIVSVSDDCETTGGGGTLQIWRMSDLIYRPEDEVLAELEKF 483          
BLAST of Gcaud2287.t1 vs. uniprot
Match: A0A0K9RF59_SPIOL (CAF1C_H4-bd domain-containing protein n=6 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9RF59_SPIOL)

HSP 1 Score: 277 bits (709), Expect = 7.410e-85
Identity = 165/467 (35.33%), Postives = 246/467 (52.68%), Query Frame = 0
Query:   25 RFKLWKEQDVPILYDWISSRPLIWPSVAVQWGAPIEDSRKERAPNNHTFSNRA-IYLSERTGDATRDPNTLLQFDVRVIHELTNKPSEVARPWADEAVVTDRSDSNSSRDFVLR-KRILHPGEVNRIRLISRD--VVVTHTDSPDLFVWDFKRQPDRKP-REVSPSSPDCTLVGHASNAEYAIDVAGYPGTDEDKWVASGGSDSSVLLWRMEDY----QSFGQELKP------FVRMTGSNGISRPAG----HTEHIEDVSFCGKQRNVICSVGRDEALFLWDVRAPQSPTTYVRKAHNGDINCCDYGGLCENHIVTGGEDKQVRLWDTRKLKGSEGEPQPLRELRGHTEAITNLMWNRNVENVLASGAVDGQVLIWRIGDDHSHRQLDSAYYDISPELLFKHIGHSINDENIWDLQWLPSSSDPWCIASLSE---TGSGGSTLQVWRISDIIHRPAEEVAADLKRY 469
            ++  WK   VP+LYDW+++  L+WPS++ +WG  +E +         T+ NR  +YLSE+T  +   PNTL+         + N   E+ +P    A    + +  +   FV + K I+HPGEVNRIR + +   +V THTDSPD+ +WD + QP+R      +PS PD  L GH  NAE+A+         ++ +V SGG D++V+LW ++D+     S     KP       V+  G +    P G    H + +EDV FC K     CSVG D  L LWD R    P   V KAHN D++C D+    EN+I+TG  D  VR++D R L  S+G   P+ +  GH  A+  + W+ +   V  S A DG + IW        ++      +  P L F+H GH    + + D  W  ++ D W I S+S+   +  GG TLQ+WR+SD+I+RP EEV A+L+ +
Sbjct:   13 KYAQWKTL-VPVLYDWLANHNLVWPSLSCRWGPQLEQA---------TYKNRQRLYLSEQTDGSV--PNTLV---------IAN--CEIVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQHNHIVATHTDSPDVLIWDVESQPNRHAVLGATPSRPDLVLTGHKENAEFALATC-----PKEPYVLSGGKDTTVVLWSIQDHITTTASDPSSNKPQGSAATIVKQNGESPSVGPRGIFQGHEDTVEDVQFCPKSSQEFCSVGDDSCLILWDARTGSDPAIKVEKAHNADLHCVDWNPFDENYILTGSADSTVRMFDRRNLT-SDGVGSPVHKFEGHKAAVLCVQWSPDNPTVFGSSAEDGVLNIWDYEKVGKKKERGVRTPNAPPGLFFQHAGHR---DKVVDFHW--NTYDSWTIVSVSDDCDSSGGGGTLQIWRMSDLIYRPEEEVLAELEEF 445          
BLAST of Gcaud2287.t1 vs. uniprot
Match: A0A5B6ZR83_DAVIN (Putative WD-40 repeat-containing protein MSI4 n=2 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZR83_DAVIN)

HSP 1 Score: 278 bits (711), Expect = 1.020e-84
Identity = 169/467 (36.19%), Postives = 248/467 (53.10%), Query Frame = 0
Query:   25 RFKLWKEQDVPILYDWISSRPLIWPSVAVQWGAPIEDSRKERAPNNHTFSNRA-IYLSERTGDATRDPNTLLQFDVRVIHELTNKPSEVARPWADEAVVTDRSDSNSSRDFVLR-KRILHPGEVNRIRLI--SRDVVVTHTDSPDLFVWDFKRQPDRKP-REVSPSSPDCTLVGHASNAEYAIDVAGYPGTDEDKWVASGGSDSSVLLWRMEDYQSF---GQELKP------FVRMT-----GSNGISRPAGHTEHIEDVSFCGKQRNVICSVGRDEALFLWDVRAPQSPTTYVRKAHNGDINCCDYGGLCENHIVTGGEDKQVRLWDTRKLKGSEGEPQPLRELRGHTEAITNLMWNRNVENVLASGAVDGQVLIWRIGDDHSHRQLDSAYYDISPELLFKHIGHSINDENIWDLQWLPSSSDPWCIASLSE---TGSGGSTLQVWRISDIIHRPAEEVAADLKRY 469
            ++  WK   VP+LYDW+++  L+WPS++ +WG  +E +         T  NR  +YLSE+T  +   PNTL+         + N   E+ +P    A    + +  +   FV + K I+HPGEVNRIR +  + ++V THTD P++ +WD + QP+R        S PD  L GH  NAE+A+ +        + +V SGG D SV+LW + D+ S        KP      FV+ T     G  GI +  GH + +EDV FC       CSVG D  L LWD R   +P   V KAHN D++C D+    EN I+TG  D  VR++D R L  S G   P+ +  GH  A+  + W+ +  +V  S A DG + IW        ++  +   +  P L F+H+GH    + I D  W  ++SDPW I S+S+   T  GG TLQ+WR+SD+I+RP EEV A+L+++
Sbjct:   51 KYTQWKSL-VPVLYDWLANHNLVWPSLSCRWGPQLEQA---------THKNRQRLYLSEQTDGSV--PNTLV---------IAN--CEIVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNNNIVATHTDCPEVLIWDVEAQPNRHAVLGAVDSRPDLVLTGHQDNAEFALAMC-----PTEPFVLSGGKDKSVVLWSIHDHISTLTTDASTKPAGSAGSFVKTTDNPSIGPRGIFQ--GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARVGFNPVVKVEKAHNADLHCVDWNPHDENLILTGSADHSVRMFDRRNLT-SNGVGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDQVGKKKERGTRAPNSPPGLFFQHVGHR---DKIVDFHW--NASDPWTIVSVSDDCDTSGGGGTLQIWRMSDLIYRPEEEVLAELEKF 481          
BLAST of Gcaud2287.t1 vs. uniprot
Match: I1HQV4_BRADI (CAF1C_H4-bd domain-containing protein n=14 Tax=Pooideae TaxID=147368 RepID=I1HQV4_BRADI)

HSP 1 Score: 275 bits (704), Expect = 4.120e-84
Identity = 170/472 (36.02%), Postives = 241/472 (51.06%), Query Frame = 0
Query:   25 RFKLWKEQDVPILYDWISSRPLIWPSVAVQWGAPIEDSRKERAPNNHTFSNRA-IYLSERTGDATRDPNTLLQFDVRVIHELTNKPSEVARPWADEAVVTDRSDSNSSRDFVLR-KRILHPGEVNRIRLISRD--VVVTHTDSPDLFVWDFKRQPDRKP-REVSPSSPDCTLVGHASNAEYAIDVAGYPGTDEDKWVASGGSDSSVLLWRMEDYQSFGQELKPFVRMTGSNGISRPA------------------GHTEHIEDVSFCGKQRNVICSVGRDEALFLWDVRAPQSPTTYVRKAHNGDINCCDYGGLCENHIVTGGEDKQVRLWDTRKLKGSEGEPQPLRELRGHTEAITNLMWNRNVENVLASGAVDGQVLIWRIGDDHSHRQLDSAYYDISPE-LLFKHIGHSINDENIWDLQWLPSSSDPWCIASLS---ETGSGGSTLQVWRISDIIHRPAEEVAADLKRY 469
            R+  WK   +P+LYDW ++  L+WPS++ +WG   E +         T+ NR  +YLSE+T  +   PNTL+         + N   EV +P    A    + +  +   FV + K I+HPGEVNRIR + +D  ++ THTDSPD+ +WD   QP+R      S S PD  L GH  NAE+A+ +        + +V SGG D SV+ W ++D+ S   +        G++G  +                    GH   +EDV FC       CSVG D  L LWD R   SP   V KAH GD++C D+     N+I+TG  D  VR+WD R L G  G   P+ +  GH  A+  + W+ +  +V  S A DG + +W       H +        SP  L F+H GH    + I D QW  +SSDPW I S+S   ET  GG TLQ+WR+SD+I+RP EEV ++L+ +
Sbjct:   14 RYAQWKSL-IPVLYDWFANHNLVWPSLSCRWGPQFEQA---------TYKNRQRLYLSEQTDGSV--PNTLV---------IAN--CEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQDSRIIATHTDSPDVLIWDVDSQPNRHAVLGASDSRPDLILRGHQENAEFALAMC-----PAEPFVLSGGKDKSVVWWSIQDHISGLGDSSKNESSPGASGSKQSGKTANDKDSPKVDPRGVFHGHDSTVEDVQFCPSSAQEFCSVGDDACLILWDARTGTSPAIKVEKAHGGDVHCVDWNLHDVNYILTGSADNSVRMWDRRNL-GPGGAGSPVHKFDGHKAAVLCVQWSPDKASVFGSSAEDGFLNVW------DHEKAGKKKNPNSPAGLFFQHAGHR---DKIVDFQW--NSSDPWTIVSVSDDGETTGGGGTLQIWRMSDLIYRPEEEVLSELENF 445          
BLAST of Gcaud2287.t1 vs. uniprot
Match: A0A0C9RN33_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_9643_1854 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9RN33_9SPER)

HSP 1 Score: 275 bits (703), Expect = 5.800e-84
Identity = 170/477 (35.64%), Postives = 248/477 (51.99%), Query Frame = 0
Query:   18 GSLNRNTRFKLWKEQDVPILYDWISSRPLIWPSVAVQWGAPIEDSRKERAPNNHTFSN-RAIYLSERTGDATRDPNTLLQFDVRVIHELTNKPSEVARPWADEAVVTDRSDSNSSRDFVLR-KRILHPGEVNRIRLI--SRDVVVTHTDSPDLFVWDFKRQPDRKPR-EVSPSSPDCTLVGHASNAEYAIDVAGYPGTDEDKWVASGGSDSSVLLWRMEDYQSFGQEL--------------KPFVRMTGSNGISRPAGHTEHIEDVSFCGKQRNVICSVGRDEALFLWDVRAPQSPTTYVRKAHNGDINCCDYGGLCENHIVTGGEDKQVRLWDTRKLKGSEGEPQPLRELRGHTEAITNLMWNRNVENVLASGAVDGQVLIW---RIGDDHSHRQLDSAYYDISPELLFKHIGHSINDENIWDLQWLPSSSDPWCIASLSETGS---GGSTLQVWRISDIIHRPAEEVAADLKRY 469
            G  + + R+  WK   VP+LYDW+++  L+WPS++ +WG  +  +         T+ N + +YLSE+T  +   PNTL+               EV +P    A    + +  +   FV + K I+HPGEVNRIR +  +R +V THTDSPD+ VWD   QP+R+     + S PD  L GH  NAE+A+ ++         +V SGG D  VLLW ++D+ S   E               K      G  G+ +  GH + +EDV FC   +   CSVG D  L LWD RA   P   V KAHN D++C D+    EN I+TG  D  VR++D R L  S G   P+ +  GHT ++  + W  +  +V  S A DG + +W   ++G   S +    +     P L F+H GH    + + D  W  +SSDPW I S+S+ G    GG TLQ+WR+SD+I+RP EEV  +L+++
Sbjct:   10 GQPSVDERYTQWKSL-VPVLYDWLANHNLVWPSLSCRWGPQLHKA---------TYKNSQRLYLSEQTDGSV--PNTLVI-----------ATCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPENRKIVATHTDSPDVLVWDTDSQPNRQASLGAADSRPDLVLTGHKDNAEFALAMS-----PRAPFVLSGGKDKCVLLWSIQDHISSLTEPSSSKGSKSLASHSDKHANTPIGPRGVYK--GHKDTVEDVQFCPSSQQEFCSVGDDSCLILWDARAGNEPAVKVEKAHNADLHCVDWNPHDENLILTGSADNSVRMFDRRNLV-SGGVGSPVHKFEGHTNSVLCVQWCPDKASVFGSAAEDGYLNVWDYEKVGKSVSKKNTPPS----PPGLFFQHAGHR---DKVVDFHW--NSSDPWTIVSVSDDGESTGGGGTLQIWRMSDLIYRPEEEVLEELEKF 446          
BLAST of Gcaud2287.t1 vs. uniprot
Match: A0A7S2ZN90_9RHOD (Hypothetical protein n=8 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZN90_9RHOD)

HSP 1 Score: 273 bits (698), Expect = 1.670e-83
Identity = 170/446 (38.12%), Postives = 242/446 (54.26%), Query Frame = 0
Query:   29 WKEQDVPILYDWISSRPLIWPSVAVQWGAPIEDSRKERAPNNHTFSNRAIYLSERTGDATRDPNTLLQFDVRVIHELTNKPSEVARPWADEAVVTDRSDSNSSRDFVLRKRILHPGEVNRIRLISRDVVVTHTDSPDLFVWDFKRQPDRKP--REVSPSSPDCTLVGHASNAEYAIDVAGYPGTDEDKWVASGGSDSSVLLWRMEDYQSFGQELKPFVRMTGSNGISRPA--GHTEHIEDVSFCGKQRNVICSVGRDEALFLWDVRAPQSPTTYVRKAHNGDINCCDYG--GLCENHIVTGGEDKQVRLWDTRKLKGSEGEPQPLRELRGHTEAITNLMWNR-NVENVLASGAVDGQVLIWRIGDDHSHRQLDSAYYDISPELLFKHIGHSINDENIWDLQWLPSSSDPWCIASLSETGSGGSTLQVWRISDIIHRPAEEVAADLK 467
            WK   VP+LYDW+ SR   WPS  VQ+G    DSR        T+++R +YLSERTG+ T D NTL     RV +E   + ++V + W++        D   S DF ++K+I+HPGEVNR+R +   VVVTHTD P+LFVWD +RQP RK   + V  + PD TLVGH +NAEYA++       +E K +ASGG D  VL+W+MEDY++        +    S+ ++R    GH++ +E ++F  +    + S G D+ +F WD R   + T  +  AH GD+NC D+   G+   +I +G           R+L  S  E     +LR HT  I  + +      +VL S A DGQVL+W I    S  +  S   +I   LLF+H GH      + + QW     DPW IAS+SE   G +TLQ+WR  D+I+    + A  L+
Sbjct:   19 WKHSHVPLLYDWMLSRKCPWPSACVQFGLGY-DSRD-------TYTDRTLYLSERTGE-TGDANTLYVASARVANEHATRSADVTKKWSENVY----RDPLPSSDFRIKKKIIHPGEVNRVRELREGVVVTHTDHPNLFVWDIERQPHRKDTSKGVESNVPDLTLVGHQANAEYAVESV-----EEGKIIASGGKDKLVLIWQMEDYETL-------LSSKNSHLLNRTILRGHSDTVEGLAFNPEDSRRLVSGGDDKCVFFWDTRK-SAATGKINDAHQGDVNCVDWSHNGM---YIASGXXXXXXXXXXVRQLSQSS-EVTSFADLREHTGQINEVQFQPCGNSSVLGSCAEDGQVLLWDIAQVESDSK-SSTGGEIPSLLLFRHYGHQYA---VSEFQWSTVPDDPWTIASVSEDEEG-ATLQIWRPLDLIYNSPVDAANILR 429          
BLAST of Gcaud2287.t1 vs. uniprot
Match: A0A2P6RY11_ROSCH (Putative transcription factor WD40-like family n=5 Tax=Rosaceae TaxID=3745 RepID=A0A2P6RY11_ROSCH)

HSP 1 Score: 274 bits (700), Expect = 2.150e-83
Identity = 176/498 (35.34%), Postives = 260/498 (52.21%), Query Frame = 0
Query:   10 RGKRTIPVGSLNRNTRFKLWKEQDVPILYDWISSRPLIWPSVAVQWGAPIEDSRKERAPNNHTFSNRA-IYLSERTGDATRDPNTLLQFDVRVIHELTNKPSEVARPWADEAVVTDRSDSNSSRDFVLR-KRILHPGEVNRIRLISRD--VVVTHTDSPDLFVWDFKRQPDRKP-REVSPSSPDCTLVGHASNAEYAIDVAGYPGTDEDKWVASGGSDSSVLLWRMEDYQSF--------------GQELKPFVRMTGSN------------GISRPAGHTEHIEDVSFCGKQRNVICSVGRDEALFLWDVRAPQSPTTYVRKAHNGDINCCDYGGLCENHIVTGGEDKQVRLWDTRKLKGSEGEPQPLRELRGHTEAITNLMWNRNVENVLASGAVDGQVLIW---RIGDDHSHRQLDSAYYDISPE-LLFKHIGHSINDENIWDLQWLPSSSDPWCIASLSE---TGSGGSTLQVWRISDIIHRPAEEVAADLKRY 469
            +GK T P    + N R+  WK   VP+LYDW+++  L+WPS++ +WG  ++ +         T+ NR  +YLSE+T  +   PNTL+         + N   EV +P    A    + +  +   FV + K I+HPGEVNRIR + ++  +V THTDSPD+ +WD + QP+R      + S PD  L GH  NAE+A+ +        + +V SGG D SV+LW ++D+ S               G   K   ++ GSN            GI +  GH + +EDV FC       CSVG D  L LWD R+  SP   V KAH+ D++C D+     N I+TG  DK VR++D R L  S G   P+ +  GH EA+  + W+ +  +V  S A DG + IW   +IG       + S   +  P  L F+H GH    + + D  W  ++SDPW + S+S+   +  GG TLQ+WR+ D+I+RP EEV A+L ++
Sbjct:    2 KGKVTEP----SVNDRYTQWKSL-VPVLYDWLANHNLVWPSLSCRWGPQLDQA---------TYKNRQRLYLSEQTDGSV--PNTLV---------IAN--CEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDIEAQPNRHAVLGATNSRPDLLLTGHQDNAEFALAMC-----PSEPFVLSGGKDKSVILWSIQDHISSLASDPGSARSPGSGGSNAKHASKVGGSNDKPTDSPSVEPRGIYQ--GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGNSPVVKVEKAHDADLHCVDWNPHDVNLILTGSADKTVRMFDRRNLT-SGGVGSPIHKFEGHNEAVLCVQWSPDKSSVFGSSAEDGLLNIWDHEKIGK--KQESVGSKLPNAPPAGLFFRHAGHR---DKVVDFHW--NTSDPWTVVSVSDDCGSTGGGGTLQIWRMIDLIYRPEEEVLAELDKF 457          
The following BLAST results are available for this feature:
BLAST of Gcaud2287.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILX7_9FLOR6.520e-26973.84WD-40 repeat-containing protein MSI4 n=1 Tax=Graci... [more]
R7QKR8_CHOCR1.460e-18254.06Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TIN6_9RHOD7.910e-9438.46Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1Q3CBT1_CEPFO2.170e-8535.91WD40 domain-containing protein/CAF1C_H4-bd domain-... [more]
A0A0K9RF59_SPIOL7.410e-8535.33CAF1C_H4-bd domain-containing protein n=6 Tax=Chen... [more]
A0A5B6ZR83_DAVIN1.020e-8436.19Putative WD-40 repeat-containing protein MSI4 n=2 ... [more]
I1HQV4_BRADI4.120e-8436.02CAF1C_H4-bd domain-containing protein n=14 Tax=Poo... [more]
A0A0C9RN33_9SPER5.800e-8435.64TSA: Wollemia nobilis Ref_Wollemi_Transcript_9643_... [more]
A0A7S2ZN90_9RHOD1.670e-8338.12Hypothetical protein n=8 Tax=Rhodosorus marinus Ta... [more]
A0A2P6RY11_ROSCH2.150e-8335.34Putative transcription factor WD40-like family n=5... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 216..230
score: 28.93
coord: 320..334
score: 36.79
coord: 370..384
score: 34.67
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 293..333
e-value: 5.0E-5
score: 32.7
coord: 184..229
e-value: 3.4
score: 13.7
coord: 248..288
e-value: 1.5
score: 16.0
coord: 401..450
e-value: 37.0
score: 7.1
coord: 343..383
e-value: 1.0E-6
score: 38.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 190..228
e-value: 0.088
score: 13.7
coord: 301..333
e-value: 9.2E-4
score: 20.0
coord: 345..382
e-value: 0.0014
score: 19.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 255..297
score: 8.937796
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 350..384
score: 12.346452
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 300..335
score: 10.007177
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 17..467
e-value: 8.2E-78
score: 264.3
IPR022052Histone-binding protein RBBP4, N-terminalPFAMPF12265CAF1C_H4-bdcoord: 27..99
e-value: 1.5E-5
score: 25.2
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 24..466
NoneNo IPR availablePANTHERPTHR22850:SF27HISTONE-BINDING PROTEIN CAF1-RELATEDcoord: 24..466
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 350..384
score: 10.284687
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 275..289
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 320..334
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 140..453

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_220_length_36054_cov_4.510163contigNODE_220_length_36054_cov_4.510163:9755..11182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2287.t1Gcaud2287.t1Gracilaria caudata M_176_S67 malemRNANODE_220_length_36054_cov_4.510163 9755..11182 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2287.t1 ID=Gcaud2287.t1|Name=Gcaud2287.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=476bp
MVANASSDARGKRTIPVGSLNRNTRFKLWKEQDVPILYDWISSRPLIWPS
VAVQWGAPIEDSRKERAPNNHTFSNRAIYLSERTGDATRDPNTLLQFDVR
VIHELTNKPSEVARPWADEAVVTDRSDSNSSRDFVLRKRILHPGEVNRIR
LISRDVVVTHTDSPDLFVWDFKRQPDRKPREVSPSSPDCTLVGHASNAEY
AIDVAGYPGTDEDKWVASGGSDSSVLLWRMEDYQSFGQELKPFVRMTGSN
GISRPAGHTEHIEDVSFCGKQRNVICSVGRDEALFLWDVRAPQSPTTYVR
KAHNGDINCCDYGGLCENHIVTGGEDKQVRLWDTRKLKGSEGEPQPLREL
RGHTEAITNLMWNRNVENVLASGAVDGQVLIWRIGDDHSHRQLDSAYYDI
SPELLFKHIGHSINDENIWDLQWLPSSSDPWCIASLSETGSGGSTLQVWR
ISDIIHRPAEEVAADLKRYSRSREQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR022052Histone-bd_RBBP4_N
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf