Gcaud2276.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2276.t1
Unique NameGcaud2276.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length266
Homology
BLAST of Gcaud2276.t1 vs. uniprot
Match: A0A2V3IT30_9FLOR (40S ribosomal protein S3a n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT30_9FLOR)

HSP 1 Score: 489 bits (1260), Expect = 2.620e-174
Identity = 250/265 (94.34%), Postives = 258/265 (97.36%), Query Frame = 0
Query:    1 MAVGKNKRLSKKGKGSRKKIMDPFLRKEWYDIKAPSIFNVRQVGKTLVSRTQGTRIASEALKGRIYEVILADLQKSEDMAYRKIRLKCEEVQGRSCLTNFNGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYFLRMFAIGFTKRRDGQVKKTTYAQSSQIREIRAKMVEIMARDASECDLKELVRKFIPEVIGKEIMKATSGIYPLRDVHIRKVKILKAPKFDITKLMELHEAGGATEDVGAPVEAAPEEPVAPQEPIPGDIPA 265
            MAVGKNKRLSKKGKGSRKKIMDPFL+KEWYDIKAPSIFNVRQVGKTLVSRTQGTRIASEALKGRIYEVILADLQKSEDMAYRKIRLKCEEVQGRSCLTNF+GMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGY LR+FAIGFTKRRDGQVKKTTYAQSSQIREIRAKMVEIM RDAS+CDLKELVRKF  EVIGKEI+K+TSGIYPLRDVHIRKVKILKAPKFDITKLMELHEAGGA+EDVGAPVE+  EEP APQEPIPGDIPA
Sbjct:    1 MAVGKNKRLSKKGKGSRKKIMDPFLKKEWYDIKAPSIFNVRQVGKTLVSRTQGTRIASEALKGRIYEVILADLQKSEDMAYRKIRLKCEEVQGRSCLTNFHGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYLLRIFAIGFTKRRDGQVKKTTYAQSSQIREIRAKMVEIMIRDASQCDLKELVRKFTLEVIGKEIVKSTSGIYPLRDVHIRKVKILKAPKFDITKLMELHEAGGASEDVGAPVESTAEEPAAPQEPIPGDIPA 265          
BLAST of Gcaud2276.t1 vs. uniprot
Match: R7QQB5_CHOCR (40S ribosomal protein S3a n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQB5_CHOCR)

HSP 1 Score: 454 bits (1168), Expect = 2.740e-160
Identity = 236/264 (89.39%), Postives = 242/264 (91.67%), Query Frame = 0
Query:    1 MAVGKNKRLSKKGKGSRKKIMDPFLRKEWYDIKAPSIFNVRQVGKTLVSRTQGTRIASEALKGRIYEVILADLQKSEDMAYRKIRLKCEEVQGRSCLTNFNGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYFLRMFAIGFTKRRDGQVKKTTYAQSSQIREIRAKMVEIMARDASECDLKELVRKFIPEVIGKEIMKATSGIYPLRDVHIRKVKILKAPKFDITKLMELHEAGGATEDVGAPVEAAPEEPVAPQEPIPGDIP 264
            MAVGKNKRLSKKGKGSRKK MDPF+RKEWYDIKAPS+F VRQVGKTLVSRTQGT+IASEALKGRIYEV LADLQKSE+ AYRKIRLKCEEVQGRSCLTNF GMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGY LRMFAIGFTKRRD QVKKTTYAQSSQIREIRAKMVEIM RDAS CDLKELVRKFIPEVIGKEI KA SGI+PL DVHIRKVKILKAPK DITK MELHEAGG  EDVG PVE  P+EP AP EPIPGD P
Sbjct:    1 MAVGKNKRLSKKGKGSRKKQMDPFMRKEWYDIKAPSVFAVRQVGKTLVSRTQGTKIASEALKGRIYEVCLADLQKSENEAYRKIRLKCEEVQGRSCLTNFYGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYLLRMFAIGFTKRRDTQVKKTTYAQSSQIREIRAKMVEIMIRDASACDLKELVRKFIPEVIGKEIEKAVSGIFPLGDVHIRKVKILKAPKLDITKFMELHEAGGQAEDVGMPVET-PDEPAAPAEPIPGDDP 263          
BLAST of Gcaud2276.t1 vs. uniprot
Match: A0A1X6NVB0_PORUM (40S ribosomal protein S3a n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVB0_PORUM)

HSP 1 Score: 396 bits (1017), Expect = 2.360e-137
Identity = 204/266 (76.69%), Postives = 223/266 (83.83%), Query Frame = 0
Query:    1 MAVGKNKRLSKKGKGSRKKIMDPFLRKEWYDIKAPSIFNVRQVGKTLVSRTQGTRIASEALKGRIYEVILADLQKSEDMAYRKIRLKCEEVQGRSCLTNFNGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYFLRMFAIGFTKRRDGQVKKTTYAQSSQIREIRAKMVEIMARDASECDLKELVRKFIPEVIGKEIMKATSGIYPLRDVHIRKVKILKAPKFDITKLMELH-EAGGATEDVGAPVEAAPEEPVAPQEPIPGDIPA 265
            MAVGKNKRLSKKGKGS+KK MDPFLRKEWYD+KAPS F  R VGKTLVSRTQGT+IAS+ LKGR+Y+V LADL   ED AYRKI LKCEEVQG SCLTNF GMDLTRDKLCSLVRKWQT+IEA VDVKTTDGY LRMF IGFTKRR  QV+KTTYAQSSQ+R IRA+MV+IM R+AS CDLKELVRK IPEVIG EI KAT GIYPL+DV +RKVK+LK+P+FDITKLMELH E   + ED GA VE        P EPIPGD+PA
Sbjct:    1 MAVGKNKRLSKKGKGSKKKSMDPFLRKEWYDVKAPSTFTKRNVGKTLVSRTQGTKIASDGLKGRVYQVSLADLNNDEDQAYRKILLKCEEVQGTSCLTNFYGMDLTRDKLCSLVRKWQTLIEAFVDVKTTDGYTLRMFCIGFTKRRKMQVRKTTYAQSSQVRAIRAEMVKIMVREASTCDLKELVRKLIPEVIGNEITKATKGIYPLQDVFVRKVKVLKSPRFDITKLMELHGEVSASAEDTGAKVER-------PAEPIPGDVPA 259          
BLAST of Gcaud2276.t1 vs. uniprot
Match: A0A7S0XJH9_9RHOD (40S ribosomal protein S3a n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XJH9_9RHOD)

HSP 1 Score: 376 bits (965), Expect = 2.010e-129
Identity = 193/259 (74.52%), Postives = 219/259 (84.56%), Query Frame = 0
Query:    1 MAVGKNKRLSKKGKGSRKKIMDPFLRKEWYDIKAPSIFNVRQVGKTLVSRTQGTRIASEALKGRIYEVILADLQKSEDMAYRKIRLKCEEVQGRSCLTNFNGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYFLRMFAIGFTKRRDGQVKKTTYAQSSQIREIRAKMVEIMARDASECDLKELVRKFIPEVIGKEIMKATSGIYPLRDVHIRKVKILKAPKFDITKLMELHEAGGATEDVGAPVEAAPEEPVAPQEPI 259
            MAVGKNKRLSKKGKG++K++ DPFL+K+WYDIKAPSIF  RQVGKTLVS+TQGT+IASE LKGRIY V LADLQK E +AYR I+LKCEEVQG+SCLTNF GMD +RD+L SLVRKWQ++IEAHVDVKTTDGY LRMF +GFTK+R  QVKKT YAQSSQIR IR KM +IM R+A  C+LKELV+ FIPEVIGKEI KA + IYPL+ VHIRKVK+LKAP+FDITKLMELH   G  EDVGA V  AP EPV   EP+
Sbjct:    1 MAVGKNKRLSKKGKGAKKRVSDPFLKKDWYDIKAPSIFATRQVGKTLVSKTQGTKIASEGLKGRIYRVSLADLQKDESIAYRTIKLKCEEVQGKSCLTNFYGMDFSRDRLFSLVRKWQSLIEAHVDVKTTDGYVLRMFCVGFTKKRQFQVKKTCYAQSSQIRAIRKKMCDIMTREAQSCELKELVQNFIPEVIGKEIEKACNWIYPLQHVHIRKVKLLKAPRFDITKLMELHS--GVAEDVGAKV--APAEPVPGSEPV 255          
BLAST of Gcaud2276.t1 vs. uniprot
Match: A0A7S1TBR4_9RHOD (40S ribosomal protein S3a n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBR4_9RHOD)

HSP 1 Score: 374 bits (961), Expect = 9.750e-129
Identity = 188/266 (70.68%), Postives = 222/266 (83.46%), Query Frame = 0
Query:    1 MAVGKNKRLSKKGKGSRKKIMDPFLRKEWYDIKAPSIFNVRQVGKTLVSRTQGTRIASEALKGRIYEVILADLQKSEDMAYRKIRLKCEEVQGRSCLTNFNGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYFLRMFAIGFTKRRDGQVKKTTYAQSSQIREIRAKMVEIMARDASECDLKELVRKFIPEVIGKEIMKATSGIYPLRDVHIRKVKILKAPKFDITKLMELHEAGGATEDVGAPVEA-----APEEPVAPQEPIPG 261
            MAVGKNKRLSKKGKG +K+  DPF +KEWYD+KAPS+F VRQ GKTLVS+TQGT+IASE LKGR++EV LADL K ED+AYRKIRLKCEEV+G++CLTNF GMD TRDKLC LVRKWQ++IEAHVDVKTTDG+ LR+F I FTKRR  QVKKTTYAQSS++R IR KMVE+M ++AS CDL+ELV KF+PEVIGKEI K  S IYPL++V+IRKVK+LKAPKFDI+KLMELH   G TED G  +++     + E+ V   EPIPG
Sbjct:    1 MAVGKNKRLSKKGKGQKKRAGDPFSKKEWYDVKAPSMFTVRQAGKTLVSKTQGTKIASEGLKGRVFEVSLADLNKDEDLAYRKIRLKCEEVEGKNCLTNFYGMDFTRDKLCGLVRKWQSLIEAHVDVKTTDGFSLRLFCIAFTKRRQQQVKKTTYAQSSKVRAIRKKMVELMVKEASACDLRELVLKFVPEVIGKEIEKICSRIYPLQNVYIRKVKMLKAPKFDISKLMELHGDSGTTEDTGMKIDSDVPVSSLEQTVENAEPIPG 266          
BLAST of Gcaud2276.t1 vs. uniprot
Match: M2Y4T6_GALSU (40S ribosomal protein S3a n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4T6_GALSU)

HSP 1 Score: 360 bits (923), Expect = 5.130e-123
Identity = 176/253 (69.57%), Postives = 211/253 (83.40%), Query Frame = 0
Query:    1 MAVGKNKRLSKKGKGSRKKIMDPFLRKEWYDIKAPSIFNVRQVGKTLVSRTQGTRIASEALKGRIYEVILADLQ--KSEDMAYRKIRLKCEEVQGRSCLTNFNGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYFLRMFAIGFTKRRDGQVKKTTYAQSSQIREIRAKMVEIMARDASECDLKELVRKFIPEVIGKEIMKATSGIYPLRDVHIRKVKILKAPKFDITKLMELHEAGGATEDVGAPVEAAPEE 251
            MA+GKNKRLSKKGKG +K++ DPFLRKEWYDIKAP++F+ RQVGKTLV++T GT+IA+++LKGR+Y+V LADL   K E +AYRKIRL+CEEV+GR+CLTNF GMD  RDKLC L+RKWQ++IEAHVDVKTTDGY LR+F IGFTKRR GQVKKT YAQ+S+IR IR KM EIM R+AS C+LKELV KFIPE IG +I KA + I+PL++VHIRKVK+L+AP+ DI KLMELH   G  ED G  VE   EE
Sbjct:    1 MAIGKNKRLSKKGKGLKKRLTDPFLRKEWYDIKAPAMFSQRQVGKTLVTKTTGTKIAADSLKGRVYDVCLADLSSNKDESLAYRKIRLRCEEVEGRNCLTNFYGMDFARDKLCGLIRKWQSLIEAHVDVKTTDGYLLRLFCIGFTKRRKGQVKKTCYAQTSKIRAIRKKMTEIMVREASSCELKELVHKFIPETIGSDIEKACASIFPLQNVHIRKVKMLRAPRLDIAKLMELHTESGIEEDAGMKVERPLEE 253          
BLAST of Gcaud2276.t1 vs. uniprot
Match: A0A250X1Z7_9CHLO (40S ribosomal protein S3a n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X1Z7_9CHLO)

HSP 1 Score: 357 bits (915), Expect = 7.090e-122
Identity = 179/246 (72.76%), Postives = 210/246 (85.37%), Query Frame = 0
Query:    1 MAVGKNKRLSKKGKGSRKKIMDPFLRKEWYDIKAPSIFNVRQVGKTLVSRTQGTRIASEALKGRIYEVILADLQKSEDMAYRKIRLKCEEVQGRSCLTNFNGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYFLRMFAIGFTKRRDGQVKKTTYAQSSQIREIRAKMVEIMARDASECDLKELVRKFIPEVIGKEIMKATSGIYPLRDVHIRKVKILKAPKFDITKLMELHEAGGATEDVGAPVE 246
            MAVGKNKR+SK  KG +KK  DPF +K+WYDIKAP+ F VRQ GKTLVSRT GT+IASE LKGR++EV LADLQK+E+ AYRKIRL+ E+VQGR+CLTNF GMD T DKL SLVRKWQT+IEA+VDVKTTDGYFLR+F I FTK+R GQ+KKT YAQ+SQIR+IR KM EIMAR+AS CDLK+LV KFIPE IGKEI KA  GIYPL++ +IRKVK+LKAPKFD+TKLME+H  G  +E+VGA +E
Sbjct:    1 MAVGKNKRISKGKKGGKKKAQDPFAKKDWYDIKAPTTFQVRQAGKTLVSRTAGTKIASEQLKGRVFEVSLADLQKNEEDAYRKIRLRVEDVQGRNCLTNFWGMDFTTDKLRSLVRKWQTLIEAYVDVKTTDGYFLRVFCISFTKKRAGQIKKTCYAQASQIRQIRKKMTEIMAREASSCDLKDLVAKFIPEAIGKEIEKACQGIYPLQNTYIRKVKVLKAPKFDLTKLMEVH--GDYSEEVGARIE 244          
BLAST of Gcaud2276.t1 vs. uniprot
Match: A0A5J4Z5U1_PORPP (40S ribosomal protein S3a n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5U1_PORPP)

HSP 1 Score: 357 bits (915), Expect = 8.750e-122
Identity = 179/250 (71.60%), Postives = 212/250 (84.80%), Query Frame = 0
Query:    1 MAVGKNKRLSKKGKGSRKKIMDPFLRKEWYDIKAPSIFNVRQVGKTLVSRTQGTRIASEALKGRIYEVILADLQKSEDMAYRKIRLKCEEVQGRSCLTNFNGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYFLRMFAIGFTKRRDGQVKKTTYAQSSQIREIRAKMVEIMARDASECDLKELVRKFIPEVIGKEIMKATSGIYPLRDVHIRKVKILKAPKFDITKLMELHEAGGATEDVG---APVEA 247
            MAVGKNKRLSKKGKG++K+  DPFL+KEW+D+KAPS+F VRQVGKTL++RTQGT+IASE LK R+YEV LADL   E +A RK++L+CEEV G+SCLT F GMD +RDKLC++VRKWQT+IEA+VDVKTTDGY LRMF IGFTKRR  QV+KT+YAQSS IR IR +MV+IM R+A   DLKELV K +PE IG EI KA + IYPL++VHIRKVK+LKAP+FDITKLMELH+ GGATEDVG   APV A
Sbjct:    1 MAVGKNKRLSKKGKGNKKRASDPFLKKEWFDVKAPSMFKVRQVGKTLINRTQGTKIASEGLKDRVYEVSLADLNGDESLALRKMKLRCEEVNGKSCLTQFYGMDFSRDKLCAMVRKWQTLIEANVDVKTTDGYVLRMFCIGFTKRRQFQVRKTSYAQSSHIRMIRKRMVDIMTREAQSSDLKELVNKLVPETIGAEIEKACTRIYPLQNVHIRKVKLLKAPRFDITKLMELHQ-GGATEDVGVGVAPVAA 249          
BLAST of Gcaud2276.t1 vs. uniprot
Match: A0A7J7Q6J9_9CHLO (40S ribosomal protein S3a n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q6J9_9CHLO)

HSP 1 Score: 355 bits (912), Expect = 1.960e-121
Identity = 180/252 (71.43%), Postives = 213/252 (84.52%), Query Frame = 0
Query:    1 MAVGKNKRLSKKGKGSRKKIMDPFLRKEWYDIKAPSIFNVRQVGKTLVSRTQGTRIASEALKGRIYEVILADLQKSEDMAYRKIRLKCEEVQGRSCLTNFNGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYFLRMFAIGFTKRRDGQVKKTTYAQSSQIREIRAKMVEIMARDASECDLKELVRKFIPEVIGKEIMKATSGIYPLRDVHIRKVKILKAPKFDITKLMELHEAGGATEDVGAPVEAAPEEP 252
            MAVGKNKR+SK  KG +KKI+DPF +K+WYD+KAPS+F VR VGKTLV+RTQGT+IAS+ LKGR++EV LADLQK+E+ AYRK+RL+ E+VQGR+CLTNF GMD T DKL S+VRKWQT+IEAHVDVKT+DG+ LRMF I FTK+R GQ+K+T YAQSSQIR IR KMVEIMAR+AS CDLK+LV KFIPE IGK+I KA  GIYPL++  IRKVK+LKAPKFD+TKLME+H  G  TEDV A VE   E P
Sbjct:    1 MAVGKNKRISKGKKGGKKKIVDPFSKKDWYDVKAPSMFAVRNVGKTLVTRTQGTKIASDGLKGRVFEVSLADLQKNEEDAYRKMRLRVEDVQGRNCLTNFWGMDFTTDKLRSMVRKWQTLIEAHVDVKTSDGFTLRMFCIAFTKKRQGQIKRTAYAQSSQIRTIRRKMVEIMAREASSCDLKDLVAKFIPEAIGKDIEKACQGIYPLQNTAIRKVKVLKAPKFDLTKLMEVH--GDYTEDVPAKVERPAEIP 250          
BLAST of Gcaud2276.t1 vs. uniprot
Match: J3LL25_ORYBR (40S ribosomal protein S3a n=22 Tax=Poaceae TaxID=4479 RepID=J3LL25_ORYBR)

HSP 1 Score: 352 bits (904), Expect = 3.580e-120
Identity = 179/251 (71.31%), Postives = 209/251 (83.27%), Query Frame = 0
Query:    1 MAVGKNKRLSKKGKGSRKKIMDPFLRKEWYDIKAPSIFNVRQVGKTLVSRTQGTRIASEALKGRIYEVILADLQKSEDMAYRKIRLKCEEVQGRSCLTNFNGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYFLRMFAIGFTKRRDGQVKKTTYAQSSQIREIRAKMVEIMARDASECDLKELVRKFIPEVIGKEIMKATSGIYPLRDVHIRKVKILKAPKFDITKLMELHEAGGATEDVGAPVEAAPEE 251
            MAVGKNKR+SK  KGS+KK +DPF +K+WYDIKAPS+FNVR +GKTLVSRTQGT+IASE LK R++EV LADLQ  ED AYRKIRL+ E+VQG++ LTNF GMD T DKL SLV+KWQT+IEAHVDVKTTD Y LR+F IGFTKRR  QVK+T YAQ+SQIR+IR KMVEIMA  AS CDLKELV KFIPEVIGK+I KATS I+PL++V +RKVKILKAPKFD+ KLME+H  G   +D+G  VE   E+
Sbjct:    1 MAVGKNKRISKGKKGSKKKTVDPFSKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASTCDLKELVSKFIPEVIGKDIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVH--GDYKDDIGTKVERPAED 249          
The following BLAST results are available for this feature:
BLAST of Gcaud2276.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IT30_9FLOR2.620e-17494.3440S ribosomal protein S3a n=1 Tax=Gracilariopsis c... [more]
R7QQB5_CHOCR2.740e-16089.3940S ribosomal protein S3a n=1 Tax=Chondrus crispus... [more]
A0A1X6NVB0_PORUM2.360e-13776.6940S ribosomal protein S3a n=1 Tax=Porphyra umbilic... [more]
A0A7S0XJH9_9RHOD2.010e-12974.5240S ribosomal protein S3a n=1 Tax=Erythrolobus mad... [more]
A0A7S1TBR4_9RHOD9.750e-12970.6840S ribosomal protein S3a n=2 Tax=Compsopogon caer... [more]
M2Y4T6_GALSU5.130e-12369.5740S ribosomal protein S3a n=1 Tax=Galdieria sulphu... [more]
A0A250X1Z7_9CHLO7.090e-12272.7640S ribosomal protein S3a n=1 Tax=Chlamydomonas eu... [more]
A0A5J4Z5U1_PORPP8.750e-12271.6040S ribosomal protein S3a n=1 Tax=Porphyridium pur... [more]
A0A7J7Q6J9_9CHLO1.960e-12171.4340S ribosomal protein S3a n=1 Tax=Scenedesmus sp. ... [more]
J3LL25_ORYBR3.580e-12071.3140S ribosomal protein S3a n=22 Tax=Poaceae TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001593Ribosomal protein S3AeSMARTSM01397Ribosomal_S3Ae_2coord: 15..221
e-value: 6.3E-133
score: 457.6
IPR001593Ribosomal protein S3AePFAMPF01015Ribosomal_S3Aecoord: 16..221
e-value: 1.2E-79
score: 266.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..265
NoneNo IPR availablePANTHERPTHR1183040S RIBOSOMAL PROTEIN S3Acoord: 1..255
NoneNo IPR availablePANTHERPTHR11830:SF1840S RIBOSOMAL PROTEIN S3Acoord: 1..255
IPR02750040S ribosomal protein S1/3, eukaryotesHAMAPMF_03122Ribosomal_S3Ae_eukcoord: 1..258
score: 39.587322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2244_length_6318_cov_4.442749contigNODE_2244_length_6318_cov_4.442749:2057..3076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2276.t1Gcaud2276.t1Gracilaria caudata M_176_S67 malemRNANODE_2244_length_6318_cov_4.442749 2057..3076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2276.t1 ID=Gcaud2276.t1|Name=Gcaud2276.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=266bp
MAVGKNKRLSKKGKGSRKKIMDPFLRKEWYDIKAPSIFNVRQVGKTLVSR
TQGTRIASEALKGRIYEVILADLQKSEDMAYRKIRLKCEEVQGRSCLTNF
NGMDLTRDKLCSLVRKWQTIIEAHVDVKTTDGYFLRMFAIGFTKRRDGQV
KKTTYAQSSQIREIRAKMVEIMARDASECDLKELVRKFIPEVIGKEIMKA
TSGIYPLRDVHIRKVKILKAPKFDITKLMELHEAGGATEDVGAPVEAAPE
EPVAPQEPIPGDIPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001593Ribosomal_S3Ae
IPR027500Ribosomal_S1/3_euk