Gcaud2275.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A2V3IT14_9FLOR (Pentatricopeptide repeat-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT14_9FLOR) HSP 1 Score: 405 bits (1041), Expect = 1.190e-135 Identity = 220/379 (58.05%), Postives = 264/379 (69.66%), Query Frame = 0
Query: 2 LVRQKHNFNRCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGRDVHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQRNQVSYRYALVAAGMMMDVELVERVARDMRANACEARLDTAATLVAAAIRCSDLQAALSHFSRFVSGGDAARNARFFEEIRAALRAFDARGVLDSRHTQRVVDELERSCMRE 380
L ++ + CL ++ QL+ I PDKYT+SLLLTACA T AM+L+ V+ARSKQP + A+ +F+SSP +T LCN++ID+F THN A++V RYM A I DAYTVSALIRAHVAT G + AL ALRDMW+ GLSVH+SAFGQVI AFG+ G VD+AVALFDEMTVFGV+P Q+TFN LI+AC GRD KAFEIFEEM A+T+F GDRYT+HALIKC L+ R RV LY I + FQ NQVSYR AL AAGM MD++ VE++ D++ N C R+D ATLVAA IRCSDLQAAL+HFS FV+ G FFE+IR ALR FD V DS HT+RVVDELERS RE
Sbjct: 115 LSKRPKSLQTCLAVFDQLHQQRITPDKYTYSLLLTACARAGATNEAMRLYQLXXXXXXXXXXXXXXXXXXVIARSKQPHVPLALRIFSSSPTRSTALCNVLIDVFVATHNAHAAQAVHRYMTGASIPPDAYTVSALIRAHVATGGPYKALTALRDMWKCGLSVHSSAFGQVISAFGRIGHVDQAVALFDEMTVFGVSPTQNTFNILIAACEGRDSEKAFEIFEEMIATTAFKGDRYTYHALIKCALSQRDTARVRELYARIKQSRFQPNQVSYRMALDAAGMGMDLDFVEQIVSDVKRNECVLRMDGVATLVAACIRCSDLQAALAHFSAFVNCGRCEAEHAFFEDIRRALRRFDCDSVCDSGHTKRVVDELERSWRRE 493
BLAST of Gcaud2275.t1 vs. uniprot
Match: R7QPA6_CHOCR (PPR_long domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPA6_CHOCR) HSP 1 Score: 189 bits (479), Expect = 2.840e-51 Identity = 134/384 (34.90%), Postives = 183/384 (47.66%), Query Frame = 0
Query: 3 VRQKHNFNRCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGRD-VHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQRNQVSYRYALVAAGMMMDVELVERVARDMRANACEARLDTAATLVAAAIRCSDLQAALSHFS---RFVSGGDAARNARFFEEIRAALRAFDARGV---LDSRHTQRVVDELERSCMR 379
+ K + CL L L + G PDKYT+S ++T C+ V AM+L++++ +V +D+Y+R NLLT A + P + VF S+ KP+ ++CN+++D +AR I S R+M+ + AD YTVSALI AFEI+EEM A TSF GDRYT H L+KCCL + R +Y + R F NQVSYR A+ AAG +MD+E V VA D+ + + R DTAA L AA IRCSDL+AAL +F + +S DA RFFE + AL+AF+ R V D +T VV E+ERS R
Sbjct: 163 MANKKDLAGCLSLLDDLRSAGCAPDKYTYSTIMTCCSRVHAPDVAMELYNKMIIEKVQVDDYIRTNLLTCAANASPPRLDTCALVFKSTRKPSQVMCNVMMDAYARAGLIEECLSTYRHMSLQSLRADKYTVSALIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEHAFEIYEEMRAMTSFPGDRYTLHCLMKCCLRSMDGWRALDIYRRLKRSPFPCNQVSYRLAVTAAGQIMDLEAVLEVADDIARHKSKMRHDTAAFLTAAFIRCSDLEAALRYFGDHLKHLSSEDAV--VRFFEMMCTALKAFEKRSVESEKDFEYTSLVVKEMERSWRR 544
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A8J5F2X4_ZINOF (Uncharacterized protein n=6 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F2X4_ZINOF) HSP 1 Score: 67.0 bits (162), Expect = 2.550e-8 Identity = 66/295 (22.37%), Postives = 126/295 (42.71%), Query Frame = 0
Query: 11 RCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGL-----------SVHA---------SAFGQV-----------IVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGRDVHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQRNQVSY 274
+ + L+ + N ++P+ +T+S +L ACA + D+Q Q+ + + N++ +L+++ AR + M A+ F S + + CN + D A+ +N A V + + +GA+A+T ++L+ A + + + +AGL S+++ AFG++ I F +QG D+A+ L+ M GV P T+ A++S+C +A G + FHA+ K A A + D + R G + +
Sbjct: 380 KAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNFVGNSLVSMYARFGR--MEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMDMGANAFTFASLLSAAASIGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQGDADQALKLYQNMVSAGVKPNAVTYVAVLSSC--------------SHAGLVEQGWEH-FHAMQKDHRVAPTMEHYACMVDLLGRSGLLEDAFKF 657
BLAST of Gcaud2275.t1 vs. uniprot
Match: UPI001CC589FA (pentatricopeptide repeat-containing protein At4g33170 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC589FA) HSP 1 Score: 65.5 bits (158), Expect = 8.330e-8 Identity = 62/277 (22.38%), Postives = 110/277 (39.71%), Query Frame = 0
Query: 25 KPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANL------LTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGRD-VHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQRNQVSYRYALVAAGMMMDVELVERVA 294
KPD ++ +++ C D HA+ L+H +RH +P D + A L LT + + +Q + P T ++D++A+ +I A + M+ I + W A ++V Q G EA+ LF++M++FG+ P + TF ++SAC V +A+E FE M S + + L+ A + + +++ F + YR L A + D E ++VA
Sbjct: 590 KPDDVAWTAMISGCVDNGDDDHALWLYHRMRHSGIPPDEFTFATLIKACSCLTALEQGRQIHANVIKLECVTDPFVGTS----IVDMYAKCGSIKDAYQLFEMMDVRNIAS----------------------------WNA-----------MVVGLAQHGNGKEALNLFEKMSLFGIIPDRITFIGVLSACSHSGLVSEAYEHFESMYKSYGIEPELEHYSCLVDVLGRAGLVNEAKKVIESMP---FDASASMYRALLGACRVQGDAETAKQVA 820
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A6A6MAQ0_HEVBR (DYW_deaminase domain-containing protein n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MAQ0_HEVBR) HSP 1 Score: 62.8 bits (151), Expect = 5.740e-7 Identity = 62/284 (21.83%), Postives = 129/284 (45.42%), Query Frame = 0
Query: 15 LYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASS---PKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGRDV-HKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQRNQVSYRYALVAAGMMMDVELVERVA 294
L+Q++ + G++PD +T S +L ACA + + + ++ + + ++ +L+ +V ++ P+ A ++V P T+ C ++ A + + ++ +D + +AL+ +V GA A R L DM L+ ++ +I +G G EA+A F+EM G+ P + +F +++ AC + ++ + +F M S + +A I LA + +++ Y I + + + L + DV+L E+VA
Sbjct: 389 LFQKMKSEGVRPDIFTISTILHACACNGSLEDGKDVHNYIKGNDIQSNLFVCNSLMDMVFKNGHPNEALGLFVAMLQELKPDGRTIAC--ILPACASLAALDRGREIHGFILRNDCFSDQHVANALVDLYV-KCGALALARLLFDMI---LTKDLISWTVMIAGYGMHGFGKEAIAAFNEMRQAGIEPDEVSFISILYACSHSGLLNEGWILFNIMQHECSI-APKLEHYACIVDLLA--RTGKLSMAYQFIKSMPIEPDATIWGALLCGCRIHHDVKLAEKVA 663
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A8B8J501_PHODC (pentatricopeptide repeat-containing protein At1g71420 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A8B8J501_PHODC) HSP 1 Score: 60.5 bits (145), Expect = 2.940e-6 Identity = 68/275 (24.73%), Postives = 115/275 (41.82%), Query Frame = 0
Query: 4 RQKHNFNRCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMT-VFGVAPQQSTFNALISACIGRDVHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQ---RNQVSY 274
R + + L+ QL HG KPD YTFS+++ ACAG H + H L +V DM +L N++I +AR +I AESV M + D + +++++A+ A AL+A M + ++ F ++ A GLV+E +F M+ V+G+ PQ + ++ +GR K E + +N D + AL+ C + H A + + A++ + +N V Y
Sbjct: 316 RAEQEPEEAICLFCQLRRHGFKPDSYTFSIVVKACAGFATEMHCSAI-HSL-----------------IVRSGFGDDM---------------VLSNVMIHAYARCGSIKLAESVFEQM----VVHDEVSWNSMVKAYAAHGRGREALQAFEHM---DVPPDSATFVGLLTACSHSGLVNEGQDIFKSMSEVYGITPQLDHYACMVDI-LGR-AGKLLEAEDLINRMPMV-SDSVIWSALLGAC----RKHGEARIGEKAAQKLMELEPQNSVGY 543
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A3S3PWV0_9MAGN (Pentatricopeptide repeat-containing protein isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3PWV0_9MAGN) HSP 1 Score: 59.7 bits (143), Expect = 5.280e-6 Identity = 65/268 (24.25%), Postives = 115/268 (42.91%), Query Frame = 0
Query: 13 LWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTV-FGVAPQQSTFNALISACIGRD--VHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQ---RNQVSY 274
L L+ +L G+ PD+YTFS+++ ACAG+ +H L H L ++ + D T+L N ++ +++R NI +E V M A D + + +I+A+ ALR M + ++ F ++ A GLVD+ LF+ M +G+APQ F ++ +GR + +A ++ ++M GD + AL+ C + H + + AR+ + +N V Y
Sbjct: 358 LLLFSRLRYQGLNPDRYTFSIVIKACAGLATERHGSAL-HGL-----------------IIRTGFEDD---------------TVLANALMHVYSRCGNIELSERVFNQMRAC----DTVSWNTMIKAYAMHGQGEEALRVFAAM---DVQPDSTTFVSLLCACAHAGLVDQGHELFNAMLERYGIAPQCDHFACMVDI-LGRAGCLTEAEDLIKQMPVQ----GDPVVWSALLGAC----RKHGETEIAERAARKLIELEPKNSVGY 576
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A484MU31_9ASTE (DYW_deaminase domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484MU31_9ASTE) HSP 1 Score: 59.7 bits (143), Expect = 5.890e-6 Identity = 68/290 (23.45%), Postives = 115/290 (39.66%), Query Frame = 0
Query: 9 FNRCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATA----GAHAALR------------------------ALRDMWRAGLSVHAS---AFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIG-RDVHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRG 266
F+ +WL++Q+ + I+ D F+ +TACAG++ Q+ + D + L+ + AR ++ A F + N ++ FA++ A V MN + A+ YT + + A A G H R +L + R + +H ++ +I + Q GL +EA+ LF+EM + GVAP TF +++AC R V K F+ M+ HG A +P A + D + R G
Sbjct: 575 FHEAIWLFRQMQDRRIQSDNIGFASAITACAGIQALNQGRQVHAQSIVSGYTSDISIGNALVCLYARCG--EVHDAHMTFNKIDSKDNISWNGLVSGFAQSGYCEEALRVFSKMNHCGVEANIYTYGSAVSAAANMANIKQGKHIHARMVKTGYDSKTESSNVLITMYAKCGSLGEAKREFMEMHCRNQVSWNAMITGYSQHGLGNEAIHLFEEMKLAGVAPNHVTFVGVLTACSHVRLVEKGLSYFKSMSED---HG-------------LAPRPEHYACVVDIMGRAG 846
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A427B9P4_ENSVE (Uncharacterized protein n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A427B9P4_ENSVE) HSP 1 Score: 59.7 bits (143), Expect = 5.940e-6 Identity = 49/224 (21.88%), Postives = 102/224 (45.54%), Query Frame = 0
Query: 24 IKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGR-DVHKAFEIFEEMNASTSFHGDRYTFHALIKCC 246
++P+ +T+S +L ACA + D Q Q+ ++ + N++ +L+T+ AR+ + M A F+ + + N ++D +A+ + A + + +GA A+T ++L+ A + + M +AG ++ + + G +D+A F EM V ++ A+I+ D +A +F +M A+ + T+ AL+ C
Sbjct: 622 VRPNHFTYSSILKACANLSDLQLGEQIHAQVTKSSLAYVNFVGNSLVTMYARAGR--MEEARRAFSLLYEKNVVSYNAIVDGYAKNSDCEEALELLYQIEGTDVGASAFTFASLLSAAASVGMMSKGQQLHAQMLKAGFGSDVGVGNSLVSMYSRCGGIDDACRAFGEMGDRNVV----SWTAMITGFAKHGDAARALGLFHDMVATGVGRPNAVTYVALLSAC 839
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A2I0WHW3_9ASPA (Pentatricopeptide repeat-containing protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WHW3_9ASPA) HSP 1 Score: 59.3 bits (142), Expect = 7.340e-6 Identity = 51/244 (20.90%), Postives = 107/244 (43.85%), Query Frame = 0
Query: 3 VRQKHNFNRCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGRDVHKAFEIFEEMNASTSFHGDRYTFHALIKCC 246
V+ N L L+ ++ IKP+ +T+S +L ACA + + + Q++ + + N++ +L+T+ A S + M A F + + N ++D + + N A + + + + +GA+A+T ++L+ + + + + + G +I + + G ++A ++FDEM V S + H A ++F EM ST + T+ A++ C
Sbjct: 354 VQGDRNDEHALSLFLKMLEGKIKPNHFTYSSILKACANLSNAELGKQVYAHVIKSGLAFVNFVGNSLVTMFANSGR--MEDACKAFEVLYEKNLVSYNALVDGYVKNSNSEEAFDIFQQIESMNLGANAFTFASLLSSAASIGVMSKGQKLHGQLLKMGYESDICINNALISMYSRCGNTEDACSVFDEMRYRNVISWTSMITGFAKH---GEAHCALQLFHEM-LSTGLRPNEVTYVAVLSAC 591 The following BLAST results are available for this feature:
BLAST of Gcaud2275.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2275.t1 ID=Gcaud2275.t1|Name=Gcaud2275.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=381bpback to top |