Gcaud2275.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2275.t1
Unique NameGcaud2275.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length381
Homology
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A2V3IT14_9FLOR (Pentatricopeptide repeat-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT14_9FLOR)

HSP 1 Score: 405 bits (1041), Expect = 1.190e-135
Identity = 220/379 (58.05%), Postives = 264/379 (69.66%), Query Frame = 0
Query:    2 LVRQKHNFNRCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGRDVHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQRNQVSYRYALVAAGMMMDVELVERVARDMRANACEARLDTAATLVAAAIRCSDLQAALSHFSRFVSGGDAARNARFFEEIRAALRAFDARGVLDSRHTQRVVDELERSCMRE 380
            L ++  +   CL ++ QL+   I PDKYT+SLLLTACA    T  AM+L+                    V+ARSKQP +  A+ +F+SSP  +T LCN++ID+F  THN   A++V RYM  A I  DAYTVSALIRAHVAT G + AL ALRDMW+ GLSVH+SAFGQVI AFG+ G VD+AVALFDEMTVFGV+P Q+TFN LI+AC GRD  KAFEIFEEM A+T+F GDRYT+HALIKC L+ R   RV  LY  I +  FQ NQVSYR AL AAGM MD++ VE++  D++ N C  R+D  ATLVAA IRCSDLQAAL+HFS FV+ G       FFE+IR ALR FD   V DS HT+RVVDELERS  RE
Sbjct:  115 LSKRPKSLQTCLAVFDQLHQQRITPDKYTYSLLLTACARAGATNEAMRLYQLXXXXXXXXXXXXXXXXXXVIARSKQPHVPLALRIFSSSPTRSTALCNVLIDVFVATHNAHAAQAVHRYMTGASIPPDAYTVSALIRAHVATGGPYKALTALRDMWKCGLSVHSSAFGQVISAFGRIGHVDQAVALFDEMTVFGVSPTQNTFNILIAACEGRDSEKAFEIFEEMIATTAFKGDRYTYHALIKCALSQRDTARVRELYARIKQSRFQPNQVSYRMALDAAGMGMDLDFVEQIVSDVKRNECVLRMDGVATLVAACIRCSDLQAALAHFSAFVNCGRCEAEHAFFEDIRRALRRFDCDSVCDSGHTKRVVDELERSWRRE 493          
BLAST of Gcaud2275.t1 vs. uniprot
Match: R7QPA6_CHOCR (PPR_long domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPA6_CHOCR)

HSP 1 Score: 189 bits (479), Expect = 2.840e-51
Identity = 134/384 (34.90%), Postives = 183/384 (47.66%), Query Frame = 0
Query:    3 VRQKHNFNRCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGRD-VHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQRNQVSYRYALVAAGMMMDVELVERVARDMRANACEARLDTAATLVAAAIRCSDLQAALSHFS---RFVSGGDAARNARFFEEIRAALRAFDARGV---LDSRHTQRVVDELERSCMR 379
            +  K +   CL L   L + G  PDKYT+S ++T C+ V     AM+L++++   +V +D+Y+R NLLT  A +  P +     VF S+ KP+ ++CN+++D +AR   I    S  R+M+   + AD YTVSALI                                                                                 AFEI+EEM A TSF GDRYT H L+KCCL +    R   +Y  + R  F  NQVSYR A+ AAG +MD+E V  VA D+  +  + R DTAA L AA IRCSDL+AAL +F    + +S  DA    RFFE +  AL+AF+ R V    D  +T  VV E+ERS  R
Sbjct:  163 MANKKDLAGCLSLLDDLRSAGCAPDKYTYSTIMTCCSRVHAPDVAMELYNKMIIEKVQVDDYIRTNLLTCAANASPPRLDTCALVFKSTRKPSQVMCNVMMDAYARAGLIEECLSTYRHMSLQSLRADKYTVSALIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEHAFEIYEEMRAMTSFPGDRYTLHCLMKCCLRSMDGWRALDIYRRLKRSPFPCNQVSYRLAVTAAGQIMDLEAVLEVADDIARHKSKMRHDTAAFLTAAFIRCSDLEAALRYFGDHLKHLSSEDAV--VRFFEMMCTALKAFEKRSVESEKDFEYTSLVVKEMERSWRR 544          
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A8J5F2X4_ZINOF (Uncharacterized protein n=6 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F2X4_ZINOF)

HSP 1 Score: 67.0 bits (162), Expect = 2.550e-8
Identity = 66/295 (22.37%), Postives = 126/295 (42.71%), Query Frame = 0
Query:   11 RCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGL-----------SVHA---------SAFGQV-----------IVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGRDVHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQRNQVSY 274
            + + L+  + N  ++P+ +T+S +L ACA + D+Q   Q+   +    +   N++  +L+++ AR  +  M  A+  F S  +   + CN + D  A+ +N   A  V   + +  +GA+A+T ++L+ A  +        +    + +AGL           S+++          AFG++           I  F +QG  D+A+ L+  M   GV P   T+ A++S+C               +A     G  + FHA+ K    A      A + D + R G   +   +
Sbjct:  380 KAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNFVGNSLVSMYARFGR--MEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMDMGANAFTFASLLSAAASIGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQGDADQALKLYQNMVSAGVKPNAVTYVAVLSSC--------------SHAGLVEQGWEH-FHAMQKDHRVAPTMEHYACMVDLLGRSGLLEDAFKF 657          
BLAST of Gcaud2275.t1 vs. uniprot
Match: UPI001CC589FA (pentatricopeptide repeat-containing protein At4g33170 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC589FA)

HSP 1 Score: 65.5 bits (158), Expect = 8.330e-8
Identity = 62/277 (22.38%), Postives = 110/277 (39.71%), Query Frame = 0
Query:   25 KPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANL------LTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGRD-VHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQRNQVSYRYALVAAGMMMDVELVERVA 294
            KPD   ++ +++ C    D  HA+ L+H +RH  +P D +  A L      LT + + +Q           + P   T     ++D++A+  +I  A  +   M+   I +                            W A           ++V   Q G   EA+ LF++M++FG+ P + TF  ++SAC     V +A+E FE M  S     +   +  L+     A   +    + +++    F  +   YR  L A  +  D E  ++VA
Sbjct:  590 KPDDVAWTAMISGCVDNGDDDHALWLYHRMRHSGIPPDEFTFATLIKACSCLTALEQGRQIHANVIKLECVTDPFVGTS----IVDMYAKCGSIKDAYQLFEMMDVRNIAS----------------------------WNA-----------MVVGLAQHGNGKEALNLFEKMSLFGIIPDRITFIGVLSACSHSGLVSEAYEHFESMYKSYGIEPELEHYSCLVDVLGRAGLVNEAKKVIESMP---FDASASMYRALLGACRVQGDAETAKQVA 820          
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A6A6MAQ0_HEVBR (DYW_deaminase domain-containing protein n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MAQ0_HEVBR)

HSP 1 Score: 62.8 bits (151), Expect = 5.740e-7
Identity = 62/284 (21.83%), Postives = 129/284 (45.42%), Query Frame = 0
Query:   15 LYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASS---PKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGRDV-HKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQRNQVSYRYALVAAGMMMDVELVERVA 294
            L+Q++ + G++PD +T S +L ACA     +    + + ++   +  + ++  +L+ +V ++  P+ A  ++V       P   T+ C  ++   A    +     +  ++      +D +  +AL+  +V   GA A  R L DM    L+    ++  +I  +G  G   EA+A F+EM   G+ P + +F +++ AC    + ++ + +F  M    S    +   +A I   LA  +  +++  Y  I     + +   +   L    +  DV+L E+VA
Sbjct:  389 LFQKMKSEGVRPDIFTISTILHACACNGSLEDGKDVHNYIKGNDIQSNLFVCNSLMDMVFKNGHPNEALGLFVAMLQELKPDGRTIAC--ILPACASLAALDRGREIHGFILRNDCFSDQHVANALVDLYV-KCGALALARLLFDMI---LTKDLISWTVMIAGYGMHGFGKEAIAAFNEMRQAGIEPDEVSFISILYACSHSGLLNEGWILFNIMQHECSI-APKLEHYACIVDLLA--RTGKLSMAYQFIKSMPIEPDATIWGALLCGCRIHHDVKLAEKVA 663          
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A8B8J501_PHODC (pentatricopeptide repeat-containing protein At1g71420 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A8B8J501_PHODC)

HSP 1 Score: 60.5 bits (145), Expect = 2.940e-6
Identity = 68/275 (24.73%), Postives = 115/275 (41.82%), Query Frame = 0
Query:    4 RQKHNFNRCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMT-VFGVAPQQSTFNALISACIGRDVHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQ---RNQVSY 274
            R +      + L+ QL  HG KPD YTFS+++ ACAG     H   + H L                 +V      DM               +L N++I  +AR  +I  AESV   M    +  D  + +++++A+ A      AL+A   M    +   ++ F  ++ A    GLV+E   +F  M+ V+G+ PQ   +  ++   +GR   K  E  + +N       D   + AL+  C    + H  A + +  A++  +   +N V Y
Sbjct:  316 RAEQEPEEAICLFCQLRRHGFKPDSYTFSIVVKACAGFATEMHCSAI-HSL-----------------IVRSGFGDDM---------------VLSNVMIHAYARCGSIKLAESVFEQM----VVHDEVSWNSMVKAYAAHGRGREALQAFEHM---DVPPDSATFVGLLTACSHSGLVNEGQDIFKSMSEVYGITPQLDHYACMVDI-LGR-AGKLLEAEDLINRMPMV-SDSVIWSALLGAC----RKHGEARIGEKAAQKLMELEPQNSVGY 543          
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A3S3PWV0_9MAGN (Pentatricopeptide repeat-containing protein isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3PWV0_9MAGN)

HSP 1 Score: 59.7 bits (143), Expect = 5.280e-6
Identity = 65/268 (24.25%), Postives = 115/268 (42.91%), Query Frame = 0
Query:   13 LWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTV-FGVAPQQSTFNALISACIGRD--VHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRGFQ---RNQVSY 274
            L L+ +L   G+ PD+YTFS+++ ACAG+   +H   L H L                 ++    + D               T+L N ++ +++R  NI  +E V   M A     D  + + +I+A+        ALR    M    +   ++ F  ++ A    GLVD+   LF+ M   +G+APQ   F  ++   +GR   + +A ++ ++M       GD   + AL+  C    + H    + +  AR+  +   +N V Y
Sbjct:  358 LLLFSRLRYQGLNPDRYTFSIVIKACAGLATERHGSAL-HGL-----------------IIRTGFEDD---------------TVLANALMHVYSRCGNIELSERVFNQMRAC----DTVSWNTMIKAYAMHGQGEEALRVFAAM---DVQPDSTTFVSLLCACAHAGLVDQGHELFNAMLERYGIAPQCDHFACMVDI-LGRAGCLTEAEDLIKQMPVQ----GDPVVWSALLGAC----RKHGETEIAERAARKLIELEPKNSVGY 576          
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A484MU31_9ASTE (DYW_deaminase domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484MU31_9ASTE)

HSP 1 Score: 59.7 bits (143), Expect = 5.890e-6
Identity = 68/290 (23.45%), Postives = 115/290 (39.66%), Query Frame = 0
Query:    9 FNRCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATA----GAHAALR------------------------ALRDMWRAGLSVHAS---AFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIG-RDVHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAARQPHRVAALYDAIARRG 266
            F+  +WL++Q+ +  I+ D   F+  +TACAG++      Q+  +        D  +   L+ + AR    ++  A   F        +  N ++  FA++     A  V   MN   + A+ YT  + + A    A    G H   R                        +L +  R  + +H     ++  +I  + Q GL +EA+ LF+EM + GVAP   TF  +++AC   R V K    F+ M+     HG              A +P   A + D + R G
Sbjct:  575 FHEAIWLFRQMQDRRIQSDNIGFASAITACAGIQALNQGRQVHAQSIVSGYTSDISIGNALVCLYARCG--EVHDAHMTFNKIDSKDNISWNGLVSGFAQSGYCEEALRVFSKMNHCGVEANIYTYGSAVSAAANMANIKQGKHIHARMVKTGYDSKTESSNVLITMYAKCGSLGEAKREFMEMHCRNQVSWNAMITGYSQHGLGNEAIHLFEEMKLAGVAPNHVTFVGVLTACSHVRLVEKGLSYFKSMSED---HG-------------LAPRPEHYACVVDIMGRAG 846          
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A427B9P4_ENSVE (Uncharacterized protein n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A427B9P4_ENSVE)

HSP 1 Score: 59.7 bits (143), Expect = 5.940e-6
Identity = 49/224 (21.88%), Postives = 102/224 (45.54%), Query Frame = 0
Query:   24 IKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGR-DVHKAFEIFEEMNASTSFHGDRYTFHALIKCC 246
            ++P+ +T+S +L ACA + D Q   Q+  ++    +   N++  +L+T+ AR+ +  M  A   F+   +   +  N ++D +A+  +   A  +   +    +GA A+T ++L+ A  +        +    M +AG          ++  + + G +D+A   F EM    V     ++ A+I+      D  +A  +F +M A+     +  T+ AL+  C
Sbjct:  622 VRPNHFTYSSILKACANLSDLQLGEQIHAQVTKSSLAYVNFVGNSLVTMYARAGR--MEEARRAFSLLYEKNVVSYNAIVDGYAKNSDCEEALELLYQIEGTDVGASAFTFASLLSAAASVGMMSKGQQLHAQMLKAGFGSDVGVGNSLVSMYSRCGGIDDACRAFGEMGDRNVV----SWTAMITGFAKHGDAARALGLFHDMVATGVGRPNAVTYVALLSAC 839          
BLAST of Gcaud2275.t1 vs. uniprot
Match: A0A2I0WHW3_9ASPA (Pentatricopeptide repeat-containing protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WHW3_9ASPA)

HSP 1 Score: 59.3 bits (142), Expect = 7.340e-6
Identity = 51/244 (20.90%), Postives = 107/244 (43.85%), Query Frame = 0
Query:    3 VRQKHNFNRCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQLFHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCNIVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAALRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQQSTFNALISACIGRDVHKAFEIFEEMNASTSFHGDRYTFHALIKCC 246
            V+   N    L L+ ++    IKP+ +T+S +L ACA + + +   Q++  +    +   N++  +L+T+ A S +  M  A   F    +   +  N ++D + +  N   A  + + + +  +GA+A+T ++L+ +  +        +    + + G          +I  + + G  ++A ++FDEM    V    S            + H A ++F EM  ST    +  T+ A++  C
Sbjct:  354 VQGDRNDEHALSLFLKMLEGKIKPNHFTYSSILKACANLSNAELGKQVYAHVIKSGLAFVNFVGNSLVTMFANSGR--MEDACKAFEVLYEKNLVSYNALVDGYVKNSNSEEAFDIFQQIESMNLGANAFTFASLLSSAASIGVMSKGQKLHGQLLKMGYESDICINNALISMYSRCGNTEDACSVFDEMRYRNVISWTSMITGFAKH---GEAHCALQLFHEM-LSTGLRPNEVTYVAVLSAC 591          
The following BLAST results are available for this feature:
BLAST of Gcaud2275.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3IT14_9FLOR1.190e-13558.05Pentatricopeptide repeat-containing protein n=1 Ta... [more]
R7QPA6_CHOCR2.840e-5134.90PPR_long domain-containing protein n=1 Tax=Chondru... [more]
A0A8J5F2X4_ZINOF2.550e-822.37Uncharacterized protein n=6 Tax=Zingiber officinal... [more]
UPI001CC589FA8.330e-822.38pentatricopeptide repeat-containing protein At4g33... [more]
A0A6A6MAQ0_HEVBR5.740e-721.83DYW_deaminase domain-containing protein n=2 Tax=He... [more]
A0A8B8J501_PHODC2.940e-624.73pentatricopeptide repeat-containing protein At1g71... [more]
A0A3S3PWV0_9MAGN5.280e-624.25Pentatricopeptide repeat-containing protein isofor... [more]
A0A484MU31_9ASTE5.890e-623.45DYW_deaminase domain-containing protein n=3 Tax=Cu... [more]
A0A427B9P4_ENSVE5.940e-621.88Uncharacterized protein n=2 Tax=Ensete ventricosum... [more]
A0A2I0WHW3_9ASPA7.340e-620.90Pentatricopeptide repeat-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..169
e-value: 5.2E-24
score: 87.2
coord: 170..370
e-value: 1.7E-27
score: 98.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 16..58
e-value: 8.5E-6
score: 25.8
coord: 154..214
e-value: 1.4E-4
score: 21.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 169..199
e-value: 1.8E-4
score: 19.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 27..61
score: 8.527949
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 165..199
score: 9.799459
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 8..335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2244_length_6318_cov_4.442749contigNODE_2244_length_6318_cov_4.442749:398..1540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2275.t1Gcaud2275.t1Gracilaria caudata M_176_S67 malemRNANODE_2244_length_6318_cov_4.442749 398..1540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2275.t1 ID=Gcaud2275.t1|Name=Gcaud2275.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=381bp
MLVRQKHNFNRCLWLYQQLNNHGIKPDKYTFSLLLTACAGVRDTQHAMQL
FHELRHYRVPLDNYLRANLLTVVARSKQPDMAFAMWVFASSPKPTTLLCN
IVIDLFARTHNISGAESVQRYMNAAQIGADAYTVSALIRAHVATAGAHAA
LRALRDMWRAGLSVHASAFGQVIVAFGQQGLVDEAVALFDEMTVFGVAPQ
QSTFNALISACIGRDVHKAFEIFEEMNASTSFHGDRYTFHALIKCCLAAR
QPHRVAALYDAIARRGFQRNQVSYRYALVAAGMMMDVELVERVARDMRAN
ACEARLDTAATLVAAAIRCSDLQAALSHFSRFVSGGDAARNARFFEEIRA
ALRAFDARGVLDSRHTQRVVDELERSCMRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat