Gcaud2111.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2111.t1
Unique NameGcaud2111.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length189
Homology
BLAST of Gcaud2111.t1 vs. uniprot
Match: A0A2V3J426_9FLOR (PH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J426_9FLOR)

HSP 1 Score: 219 bits (557), Expect = 1.300e-69
Identity = 122/202 (60.40%), Postives = 146/202 (72.28%), Query Frame = 0
Query:    1 MEGFLSKRGKRIGSRVKRYMRLQGAYLSNHHAPSEAPTWRVNIKDASISCNLHKHRIMLELYANKLELFADSAADCQLWYDALCSVQ----------QHAAEKENQRPTGSSQQH-PKLFNLQSDSAPSQQAPQQAPVTRTSDLGKNFKVVKPKPSASR---EQSNESDEPHPSQQPLAVNGQPYEETPASMIFKQFNFPPK 188
            MEGFL+KRGKR+GSRVKRYMRL  A+LSNHH P+E PTWRVNIKDA ISCN  K+RI ++LY NKLEL+AD++ DC LWYDAL + +           HA  KEN +P  S+Q H P+L N+QS   P  +  + +   R SDLGKNFKVVKP+PS +    + S  SD+P+  QQPLAVNGQ YEETPASMIFKQFNFP K
Sbjct:    1 MEGFLAKRGKRMGSRVKRYMRLDAAFLSNHHTPNEPPTWRVNIKDAHISCNTKKNRITIDLYGNKLELYADTSHDCDLWYDALTASKAKANLSNPSSSHANGKENNQP--SNQTHDPRLINMQSCDMPDPENNRSS--KRASDLGKNFKVVKPQPSNNNVLAQSSAASDDPYDGQQPLAVNGQVYEETPASMIFKQFNFPAK 198          
BLAST of Gcaud2111.t1 vs. uniprot
Match: R7QS02_CHOCR (PH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS02_CHOCR)

HSP 1 Score: 156 bits (394), Expect = 8.610e-45
Identity = 95/197 (48.22%), Postives = 123/197 (62.44%), Query Frame = 0
Query:    1 MEGFLSKRGKRIGSRVKRYMRLQGAYLSNHHAPSEAPTWRVNIKDASISCNLHKHRIMLELYANKLELFADSAADCQLWYDALCSVQQHAAEKE----NQRPTGSSQQHPKLFNLQSDSAPSQQAP----QQAPVTRTSDLGKNFKVVKPKP-SASREQSNESDEPHPSQQPLAVNGQPYEETPASMIFKQFNFPPK 188
            MEG+L K+GKR+GSRVKRYMRL GA LSNHHA    P+WRVN+KDA I  +  +H++ +ELY NKLEL+A+SA +   W+DAL + ++ AA ++    N     +S   P   ++ +  + SQ  P    Q  P    + L  NFKVVKP   + S   S+ SDE +    PL V GQ YEETPASMIFKQF FP K
Sbjct:   14 MEGYLGKKGKRMGSRVKRYMRLDGAILSNHHAAGAPPSWRVNVKDAVIGHHAKRHKVTIELYNNKLELYAESARESSQWFDALRNAKKKAASRDAAPSNDSMPAASVDLP--ADIDASRSRSQADPVEDRQDRPANARAHLSNNFKVVKPASRNVSSTDSSGSDEAYEGG-PLVVQGQVYEETPASMIFKQFTFPAK 207          
BLAST of Gcaud2111.t1 vs. uniprot
Match: A0A1X6NZW0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZW0_PORUM)

HSP 1 Score: 68.6 bits (166), Expect = 3.810e-10
Identity = 31/93 (33.33%), Postives = 52/93 (55.91%), Query Frame = 0
Query:    1 MEGFLSKRGKR-IGSRVKRYMRLQGAYLSNHHAPSEAPTWRVNIKDASISCNLHKHRIMLELYANKLELFADSAADCQLWYDALCSVQQHAAE 92
            M+G+L K GK  + SR +RY RL+G  LSNHH+P    +W  ++    ++    +H +++ L   ++  FA++A D   W DAL +    + E
Sbjct:   12 MDGWLFKEGKSFLRSRTRRYFRLKGTVLSNHHSPGSPASWEASVISCPVTAGAREHELVVALPTRQMSFFAETATDFAAWVDALRTASARSLE 104          
BLAST of Gcaud2111.t1 vs. uniprot
Match: A0A5J4YUJ5_PORPP (Putative myosin light chain kinase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUJ5_PORPP)

HSP 1 Score: 62.0 bits (149), Expect = 5.750e-8
Identity = 26/82 (31.71%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    2 EGFLSKRGKRIGSRVKRYMRLQGAYLSNHHAPSEAPTWRVNIKDASISCNLHKHRIMLELYANKLELFADSAADCQLWYDAL 83
            +G+L K G+ + S+ +R++RL+G  LSNHHA +   TW V++ D  +      + ++++L + ++ LFA++  +   W  AL
Sbjct:   58 QGWLYKEGRVLRSKHRRFLRLKGTILSNHHAENAPATWEVSVLDCPVRAGAKHNELVIQLPSRRVSLFAENDREFNRWVQAL 139          
BLAST of Gcaud2111.t1 vs. uniprot
Match: A0A7S0T7G0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7G0_9RHOD)

HSP 1 Score: 59.3 bits (142), Expect = 4.780e-7
Identity = 25/86 (29.07%), Postives = 49/86 (56.98%), Query Frame = 0
Query:    1 MEGFLSKRGKRIGSRVKRYMRLQGAYLSNHHAPSEAPTWRVNIKDASISCNLHKHRIMLELYANKLELFADSAADCQLWYDALCSV 86
            M G++ K GK + S+V+R+++L+G+ LSNHH+ +   +W V++ +  +      + +++ L   K   FA +  +   W +AL S 
Sbjct:   12 MSGWVYKEGKFLRSKVRRFLKLRGSMLSNHHSDNSPASWEVSVLECPVCAGSRANELVIHLPGRKTSFFAANEREYSRWMEALKSA 97          
BLAST of Gcaud2111.t1 vs. uniprot
Match: A0A7S1ET06_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ET06_9RHOD)

HSP 1 Score: 56.6 bits (135), Expect = 1.070e-6
Identity = 21/83 (25.30%), Postives = 51/83 (61.45%), Query Frame = 0
Query:    1 MEGFLSKRGKRIGSRVKRYMRLQGAYLSNHHAPSEAPTWRVNIKDASISCNLHKHRIMLELYANKLELFADSAADCQLWYDAL 83
            + G+++K G+ + S+ +RY++L+G+ LSNHH+ +   +W V++ +  +S    ++ +++ L   ++  F ++  +   W +AL
Sbjct:   16 ISGWVTKEGRLLRSKHRRYLKLRGSILSNHHSENSPASWEVSVVERPVSSGSKRNELVIPLPTRRVSFFVENDREFTKWMEAL 98          
The following BLAST results are available for this feature:
BLAST of Gcaud2111.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J426_9FLOR1.300e-6960.40PH domain-containing protein n=1 Tax=Gracilariopsi... [more]
R7QS02_CHOCR8.610e-4548.22PH domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A1X6NZW0_PORUM3.810e-1033.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YUJ5_PORPP5.750e-831.71Putative myosin light chain kinase n=1 Tax=Porphyr... [more]
A0A7S0T7G0_9RHOD4.780e-729.07Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A7S1ET06_9RHOD1.070e-625.30Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 1..90
e-value: 6.9E-6
score: 35.6
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 1..87
e-value: 5.5E-6
score: 26.8
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 1..88
score: 6.7639
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..106
e-value: 1.5E-9
score: 39.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..188
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 1..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_112_length_49450_cov_4.312142contigNODE_112_length_49450_cov_4.312142:46323..46889 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2111.t1Gcaud2111.t1Gracilaria caudata M_176_S67 malemRNANODE_112_length_49450_cov_4.312142 46323..46889 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2111.t1 ID=Gcaud2111.t1|Name=Gcaud2111.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=189bp
MEGFLSKRGKRIGSRVKRYMRLQGAYLSNHHAPSEAPTWRVNIKDASISC
NLHKHRIMLELYANKLELFADSAADCQLWYDALCSVQQHAAEKENQRPTG
SSQQHPKLFNLQSDSAPSQQAPQQAPVTRTSDLGKNFKVVKPKPSASREQ
SNESDEPHPSQQPLAVNGQPYEETPASMIFKQFNFPPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf