Gcaud198.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud198.t1
Unique NameGcaud198.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length622
Homology
BLAST of Gcaud198.t1 vs. uniprot
Match: A0A2V3IEM1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM1_9FLOR)

HSP 1 Score: 202 bits (515), Expect = 1.630e-53
Identity = 230/608 (37.83%), Postives = 315/608 (51.81%), Query Frame = 0
Query:    1 MSSSDIDPFKEALALETEVKLNNDIDAMIRLGNLLITDRRLGS------QQARGFQMLERAVKQGHHPCAMNCLAYHLLTSGMTECYSRAVSLLERSVKLQENPLFINMLGLCYRIGKGVAKDGDIARQLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMYHTGNGNLKRCTKKAEKWYSRAIRKHSYAPSIRKLAILLLENSPS-CADIRRAVQLLEDAMDQEQEQHIETILRLADTYRGYR--IDPDRALLLYEIAAIRFDSPDARCVLLGSWIGGVVGLRPDHVRILDFCLDDARKTGNYCSVVTA-ATMIWTGAEHIRRDRT----VALKFLSSHGLSDHAFFTLLLRRDLSCFPGGRRSAQRLTKSYEKKIDRSNCGRVDAIILSENGGAE-DKAVAMSHFRAQRAN---ESLIAWLAPLLRMGRYRIPFDGHLDCITDPVTKFARGEHIASLNLASLLLEIEGMQQE----AVTILEELMNSDLKLIASLNLAYVLMSDVEGVKQDRKRGMKLLEEVVKDTNDVSARAMLANALSERSDSDRGAIERG-WELWQGVIRA-LEDEEELRKVGRLVS 584
            MS +++   + A   E  +K  ND+DAMI+LG++L++ R             RG Q+LERAVKQ  +P A   LA H    G  +   R VSLLE + +   +P+ +++L      G    KD        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +YH G  NL+   + A KWY R+I    +  S   LA LLLE       D  RA  LLEDA+ Q   +   +++ LA+ Y  +R   +  RA  L E A   F S  A   LL     G  G   DH R +  C      T  + +V+   A+++W+G+  +R DR     VA +  + HG+     F L+LR D    P  R+ A     ++       +C  V+A++ SE      D   A   FR  R N      + W+   +R     +P+ G   C T  V +F    +I SLNLASLLL+      E    A+TILE LM ++L+ IA++NL YVL   V G+ QD+ R +K+L   + +T DVSAR +LA+ L+ER++     +E   W L    IRA + DEEEL+K+ RL+S
Sbjct:    1 MSLNNLSAVQLAKRYERAIKRFNDVDAMIQLGHMLLSGRHSSGAVGYKIDHCRGVQLLERAVKQADNPRAKALLALHFRDFGNKKQRRRVVSLLEDAFRQMGDPVSLHVLAKVLYDGDCGEKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNESDIMHRLARLYHEGTVNLEPSFENAVKWYQRSIDVGEHCDSKYYLARLLLETPVGEYRDPTRAALLLEDALTQSYTER--SLICLANVYTVHRQVANIPRAAYLLERAVCDFGSTAATVHLLNFCAFGFQGFPLDHQRAILICERHLSCTNPHRTVMMIMASILWSGSVSVRVDRERAIQVARQIENDHGI----MFALMLRYDAPSRPADRKLAASYFTNFR------HC-YVNALLTSEQEDPRFDSVQAEQMFRLARGNLLGTDYLGWIPLYIRKSTLGLPYHGDERCFTKNVMRFCSVANITSLNLASLLLDRTSKSPEQCAEAITILECLMETELRDIAAVNLCYVLWYGVGGIAQDQPRALKMLVRFIGETRDVSARVLLASTLAERANESNWNLESSSWTL--SAIRAEISDEEELQKLARLLS 593          
BLAST of Gcaud198.t1 vs. uniprot
Match: A0A2V3IEN9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEN9_9FLOR)

HSP 1 Score: 198 bits (504), Expect = 5.550e-52
Identity = 242/600 (40.33%), Postives = 331/600 (55.17%), Query Frame = 0
Query:   12 ALALETEVKLNNDIDAMIRLGNLL-ITDRRLGSQQARGFQMLERAVKQGHHPCAMNCLAYHLLTSGMTECYSRAVSLLERSVKLQENPLFINMLGLCYRIGKGVAKDGDIARQLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LMYHTGNGNLKRCTKKAEKWYSRAIRKHSYAPSIRKLAILLL----ENSPSCADIRRAVQLLEDAMDQEQEQHIET-ILRLADTYRGYRIDPD-----RALLLYEIAAIRFDSPDARCVLLGSWIGGVVGLRPDHVRILDFCLDDARKTGNYCSVV--TAATMIWTGAEHIRRDRTVALKFLSSHGLSDHAFFTLLLRRDLSCFPGGRRSAQRLTKSYEKKIDRSNCGRVDAIILSENGGAE-DKAVAMSHFR---AQRANESLIAWLAPLLRMGRYRIPFDGHLDCITDPVTKFARGEHIASLNLASLLLEIEGMQ----QEAVTILEELMNSDLKLIASLNLAYVLMSDVEGVKQDRKRGMKLLEEVVKDTNDVSARAMLANALSERSDSDRGAIERGWELWQGVIRALEDEEELRKVGRLVSEISK 588
            A   E  +K NNDI AMI L  +L   D     + +RG Q+ ERA+KQ +   A+  L  +    G      RA+ LLER+V+  EN   I+ L  C+ + +   K  D+ R   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++Y +G   L R  KKA KWY  AI       S   LA+LL     ++ P  A   RA QLLE+A++Q    H E  +L LAD Y  +   P+     RAL L+E AA +++S +A   LL     G  G   D+ R L   L   R  G + S V  T A ++W GA +++RDR  A+              +L+LR      P  RR+A++  K  E+K   +    V ++ +SE    E D A A + FR       +   I WL   LRMG  ++P+ G   C T    KF +G+ I  LNLASLLLE          E V + E LM++ +  IA++NL+Y+L   + G+ Q+RKR ++LL+++V++ N+ SAR +LA+ L+E +  +   +ER   LW  V    E+EEEL+K+  L+S  +K
Sbjct:   12 ARTFERAIKANNDIHAMIGLACMLTFGDEDFPKEPSRGVQLFERAIKQANAQRALLFLGLYFQHEGNRSERRRALPLLERAVQCWENYECIHALA-CFLMDEQCPKQ-DLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLYESGTPLLPRSFKKAAKWYQSAIDTAGDHRSKSCLALLLTSRDWDHPPQPA---RAAQLLEEALEQH---HCEVYLLELADLYVEF---PELQKTARALELFESAAKQYNSYEAIRSLLDFLAYGEQGFPVDYQRALSV-LKHFRVQGGHDSFVEYTTACILWNGAFNVKRDRERAISIARPRRWFQDCTLSLMLRYGAPNLPRDRRAAKKYYKRIEEK---TYFDLVHSLFISEPDDPEYDPARAEAIFRDIPISELDSGYIGWLPLSLRMGNIKLPYTGDERCFTYSFRKFGKGKDILVLNLASLLLEKTPKSVETGNEIVEMYESLMDTAVGDIATMNLSYLLWKGIAGITQNRKRAIELLDKLVQEKNNASARVLLASILAEDAGENNKQLERCSALWNSVKEDTEEEEELQKLAMLLSTTAK 596          
BLAST of Gcaud198.t1 vs. uniprot
Match: A0A2V3J3A2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3A2_9FLOR)

HSP 1 Score: 176 bits (445), Expect = 7.420e-44
Identity = 169/601 (28.12%), Postives = 266/601 (44.26%), Query Frame = 0
Query:    1 MSSSDIDPFKEALALETEVKLNNDIDAMIRLGNLLITDR--RLGSQQARGFQMLERAVKQGHHPCAMNCLAYHLLTSGMTECYSRAVSLLERSVKLQENPLFINMLGLCYRIGKGVAKDGDIAR--QLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMYHTGNGNLKRCTKKAEKWYSRAIRKHSYAPSIRKLAILLLENS-PSCADIRRAVQLLEDAMDQEQEQHIETILRLADTYRGYRI--DPDRALLLYEIAAIRFDSPDARCVLLGSWIGGVVGLRPDHVRILDFCLDDARKTGNYCSVVT--AATMIWTGAEHIRRDRTVALKFLSSHGLSDHAFFTLLLRRDLSCFPGGRRSAQRLTKSYEKKIDRSNCGRVDAIILSENGGAE---DKAVAMSHFRAQRANESLIA--WLAPLLRMGRYRIPFDGHLDCITDPVTKFARGEHIASLNLASLLLEIEGMQQEAVTIL---EELMNSDLKLIASLNLAYVLMSDVEGVKQDRKRGMKLLEEVVKDTNDVSARAMLANALSERSDSDRGAIERGWELWQGVIRALEDEEELRKVGRLVS 584
            M S+++    EA A E  +K  ND  A++ L  LL+TD+       ++RG Q+LERA+KQ     A+  L+Y    S                      P  ++++GL   +        D+ R  Q+F                                                       +Y TG   L R      KWY RAI    Y+P+   LA  L            RA QL E+A+DQ   +     L LAD Y  Y      +R +LLYE  A +++S  A+C L+     G+  +  D  R+L   L   R +   C ++T   A+++W+GA  I+  R  A+    +    +    +L+LR      P  R +A+   K Y +  +++      ++ +SE    E    +A+ +        +E + A  WL   LRM + R P+ GH  C T  V +FA    I  LN+ASLLLE     + + TI+   E+LM ++L  +A+LNL+YVL   V  V QD+ R + LLE +V++ ND+SAR +L + L+E ++ +   I+R   LW+ V    +++EEL+K+ RL+S
Sbjct:    1 MPSTELSWEDEARAYEEAIKNGNDEYALVDLAVLLLTDKDDEPAPDRSRGIQLLERAIKQFASQGALVELSYQYRFSDSRSXXXXXXX--XXXXXXXXXPNMVSLVGLAKALADPELPMYDLERAVQIFKRCSRNGRASLVMADLAELQLRQPSLRVDRRSALRLFKDAIKVSNSPSLMTKLGHLYSTGTALLPRSYDDMIKWYQRAIDDGKYSPAKYYLACALTSTEWDQPRKPFRASQLFEEALDQNPCEGYA--LALADLYVDYLELQKTERGILLYEATAKKYNSRKAKCALIYILAHGLFDIPIDCKRVLTI-LKPYRSSSARCRLITETVASVLWSGAIGIKPRRKFAVDIARTTRWPNDYTLSLMLRYGAPGLPVNRHAAK---KRYRQVKNKAAYDIAHSLFISEPSDPEYDPGRAIRIIPSIVTLDSEYVTAFGWLPLYLRMSKIRFPYHGHEQCFTYSVKRFAGLHDILILNMASLLLEEPSSSETSNTIICMFEDLMGTELHDVATLNLSYVLWKGVGVVPQDKARAIGLLEGLVEERNDISARVLLTSILAEETNENN--IQRCLSLWRTVEEETDEDEELKKLSRLLS 591          
BLAST of Gcaud198.t1 vs. uniprot
Match: A0A2V3ITQ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITQ7_9FLOR)

HSP 1 Score: 166 bits (419), Expect = 1.840e-40
Identity = 210/578 (36.33%), Postives = 308/578 (53.29%), Query Frame = 0
Query:   28 MIRLGNLLITDRRLGSQQARGFQMLERAVKQGHHPCAMNCLAYHLLTSGMTECYSRAVSLLERSVKLQENPLFINMLGLCYRIGKGVAKDGDIARQLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMYHTGNGNLKRCTKKAEKWYSRAIRKHSYAPSIRKLAILLLENSPSCA-DIRRAVQLLEDAMDQEQEQHIETILRLADTYRGYR--IDPDRALLLYEIAAIRFDSPDARCVLLGSWIGGVVGLRPDHVRILDFCLDDARKTGNYCSVVTAATMIWTGAEHIRRD--RTVAL-KFLSSHGLSDHAFFTLLLRRDLSCFPGGRRSAQRLTKSYEKKIDRSN-CGRVDAIILSENGGAEDKAV--AMSHFRAQRANESLI---AWLAPLLRMGRYRIPFDGHLDCITDPVTKFARGEHIASLNLASLLLEIEGM----QQEAVTILEELMNSDLKLIASLNLAYVLMSDVEGVKQDRKRGMKLLEEVVKDTNDVSARAMLANALSERSDSDRGAIERGWELWQGVIRALEDEEELRKVGRLVSEISKE 589
            MI L NLL+       ++ RG QMLERA+KQ   P AM  LA + L  G    Y +AV+LLERS+   E+P  +++L      G GV ++        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +++  G  +     ++A KW++RAI   +   +   LA++L +       D  RA  LLE+ +++  +Q    IL+LA+ Y  +   ++  RA+ L   A   F+S  AR  L      G  G+       L        K  +  S++  + M+W+G E +  D  R+V+L K L       +     +LR      P  R   Q +T    +K D  +    V AI+LSE+  + D  +  A+  FRA   +  L     WL   LR     +P  G+  CIT+ V ++     IA LNLASLL+E         +EAV +LE L+++ +  +A+LNL Y+L ++V G+ QD++R   L E   ++ N++  + +LANALSE  D +    ++  ELW+ V  A +   E+ ++  ++S+ +KE
Sbjct:    1 MIALANLLMYSEDYRDEE-RGIQMLERAIKQAGSPLAMYRLARYYLDFGSRSQYHKAVALLERSLHQSEDPAVLHLLSFAVASGLGVRRNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALGVVFADGAPHFPPNARRAVKWFNRAIEVGNLPSAKHNLAVILTQTHDKVMPDPSRAALLLEEVVEETGKQG--AILQLAELYSNWLSVLNYPRAVTLLTRAVHEFNSYPARFSLARMLAFGE-GVPAQRATALGLFERHYEKVHDIGSMLNLSEMLWSGTEELPADMERSVSLCKQLCRKTDIGNYVLASMLRYGAPTLP--RNLKQAITICEREKADDDHFIMLVHAILLSEDPESNDSDISHAIELFRALSVDTPLQMWWVWLPLSLRTSSVDLPIHGNEHCITESVKRYEEVNVIAKLNLASLLVEDRSPTLQDSEEAVQLLESLIDTRIGDLAALNLGYLLWNEVGGIPQDKERARALFERATEEDNNLVGKVLLANALSEGIDEEVSDADQVAELWRSVEDANKTNAEVSRLSSMLSDQAKE 572          
The following BLAST results are available for this feature:
BLAST of Gcaud198.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IEM1_9FLOR1.630e-5337.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEN9_9FLOR5.550e-5240.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J3A2_9FLOR7.420e-4428.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITQ7_9FLOR1.840e-4036.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 227..247
NoneNo IPR availableCOILSCoilCoilcoord: 469..489
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 156..254
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 156..254
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 9..168
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 156..295
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 497..533
e-value: 38.0
score: 8.6
coord: 25..60
e-value: 38.0
score: 8.7
coord: 172..208
e-value: 0.019
score: 24.1
coord: 98..133
e-value: 2.2
score: 17.3
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 102..130
e-value: 0.058
score: 14.1
coord: 172..205
e-value: 0.0024
score: 18.5
coord: 26..60
e-value: 14.0
score: 6.5
coord: 155..168
e-value: 200.0
score: 2.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 7..393
e-value: 5.4E-36
score: 126.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1898_length_7812_cov_5.919700contigNODE_1898_length_7812_cov_5.919700:1322..3187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud198.t1Gcaud198.t1Gracilaria caudata M_176_S67 malemRNANODE_1898_length_7812_cov_5.919700 1322..3187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud198.t1 ID=Gcaud198.t1|Name=Gcaud198.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=622bp
MSSSDIDPFKEALALETEVKLNNDIDAMIRLGNLLITDRRLGSQQARGFQ
MLERAVKQGHHPCAMNCLAYHLLTSGMTECYSRAVSLLERSVKLQENPLF
INMLGLCYRIGKGVAKDGDIARQLFQRALRLKQDPRIMGNLAIQLLETPK
LHAQTERAIALYEKAVQLSSHPEMMNNLALMYHTGNGNLKRCTKKAEKWY
SRAIRKHSYAPSIRKLAILLLENSPSCADIRRAVQLLEDAMDQEQEQHIE
TILRLADTYRGYRIDPDRALLLYEIAAIRFDSPDARCVLLGSWIGGVVGL
RPDHVRILDFCLDDARKTGNYCSVVTAATMIWTGAEHIRRDRTVALKFLS
SHGLSDHAFFTLLLRRDLSCFPGGRRSAQRLTKSYEKKIDRSNCGRVDAI
ILSENGGAEDKAVAMSHFRAQRANESLIAWLAPLLRMGRYRIPFDGHLDC
ITDPVTKFARGEHIASLNLASLLLEIEGMQQEAVTILEELMNSDLKLIAS
LNLAYVLMSDVEGVKQDRKRGMKLLEEVVKDTNDVSARAMLANALSERSD
SDRGAIERGWELWQGVIRALEDEEELRKVGRLVSEISKERWREYFRQQPE
EMRETCSSSATGLNCNEGFKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf