Gcaud1910.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1910.t1
Unique NameGcaud1910.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length164
Homology
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BLAST of Gcaud1910.t1 vs. uniprot
Match: A0A2V3J4N3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4N3_9FLOR)

HSP 1 Score: 196 bits (498), Expect = 3.310e-61
Identity = 98/187 (52.41%), Postives = 129/187 (68.98%), Query Frame = 0 
Query:    1 MLARSHPYGNGGLDNRIGYTGYDPEAIEKEFQDAKRKMDAYIADPPEEIRNIWM-------------------------DLHGVSIVPIVERSIRRTLSDDHVYVIETGEESLLAVTAEKDKKILLTFEKEQEACRFEIHLTAEGQAAKRVRMSIEVAKSICNDGGMYFGIVPERTLVSPMQFEPAS 162
            MLA+SHPYGNGGLDNR  YTGYDPEA+ KE ++A+RK  A+    PE++ N+WM                         DL G+SIVP+VERS+RR+LSD+++YVIETG E LL+V A+  + ILLTFEKE EA RFE +L A+ Q+AK V++SIEV K +C + G+  G+VP+ TLVSP+QF P +
Sbjct:    1 MLAKSHPYGNGGLDNRCDYTGYDPEAVRKEIEEAERKAAAWEVKTPEDLENVWMVVMSSDIIQWDNNLFKASVENGFSWDLRGISIVPMVERSVRRSLSDNYLYVIETGSEQLLSVRADNSEDILLTFEKEAEAKRFESYLIADNQSAKIVKLSIEVVKRMCQERGVLIGVVPQGTLVSPLQFNPTA 187
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BLAST of Gcaud1910.t1 vs. uniprot
Match: R7QGI1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGI1_CHOCR)

HSP 1 Score: 93.6 bits (231), Expect = 1.520e-20
Identity = 63/190 (33.16%), Postives = 96/190 (50.53%), Query Frame = 0 
Query:    2 LARSHPYGNGGLDNRIGYTGYDPEAIEKEFQDA------------KRKMDAYIADPPEEIRNIWM---------DLHGVSIVPIVERSIRRTLSDD--HVYVIETGEESLLAV-------TAEKDKKILLTFEKEQEACRFEIHLTAEGQAAKRVRMSIEVAKSICNDGGMYFGIVPERTLVSPMQFEPA 161
            +ARSHPYGNGGL +   YTG+D EA+ KE  +A            K+ +    AD  +   N++          DL G+++V I E   R+ +  D   ++++  GE+ +L+        + ++  ++LLTF  + EA RF   L AEG   K   + I   K  C   GM  G+VP +TLV+P QF+ A
Sbjct:   35 MARSHPYGNGGLPDEPDYTGWDREALMKEIAEAEANFVPADPDGMKKWVLVMAADIIQWNNNLFKASKEQGFEWDLSGINVVAIHENIARKCIEPDTTDLWILLMGEDGVLSFGIHDKDQSVDEGDEVLLTFTMKDEALRFADQLIAEGMDPKLRLVPIPALKEFCRKDGMILGLVPAKTLVTPGQFDRA 224
The following BLAST results are available for this feature:
BLAST of Gcaud1910.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4N3_9FLOR3.310e-6152.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGI1_CHOCR1.520e-2033.16Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021503Protein of unknown function DUF3110PFAMPF11360DUF3110coord: 79..155
e-value: 1.5E-6
score: 28.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_927_length_16063_cov_4.587278contigNODE_927_length_16063_cov_4.587278:6192..6758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1910.t1Gcaud1910.t1Gracilaria caudata M_176_S67 malemRNANODE_927_length_16063_cov_4.587278 6192..6758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1910.t1 ID=Gcaud1910.t1|Name=Gcaud1910.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=164bp
MLARSHPYGNGGLDNRIGYTGYDPEAIEKEFQDAKRKMDAYIADPPEEIR
NIWMDLHGVSIVPIVERSIRRTLSDDHVYVIETGEESLLAVTAEKDKKIL
LTFEKEQEACRFEIHLTAEGQAAKRVRMSIEVAKSICNDGGMYFGIVPER
TLVSPMQFEPASK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021503DUF3110