Gcaud191.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud191.t1
Unique NameGcaud191.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length212
Homology
BLAST of Gcaud191.t1 vs. uniprot
Match: A0A2V3IS62_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS62_9FLOR)

HSP 1 Score: 315 bits (806), Expect = 1.540e-104
Identity = 136/201 (67.66%), Postives = 158/201 (78.61%), Query Frame = 0
Query:    2 NCRGPCDLRPVRARPRWANYWSPDHPAATYRRGQRALIKYARNNHGPGGFIRLSLVPPGRIMHRHTHDRNAFHYSCWGAYPVVAKPWERVRGKFGFSFVGSDGGLHRFAKGYYQVSVTIPTVVPDGDYVLGWAWYGGTGGKLRSSWRPQYPKSMGYFGDYYSCAFVRIRGGPLTRSYAPRFINDMAQFSKIGCMSSTDELG 202
            NCRGPCDLRP+ A+ R+AN+W+P HPAATY RGQR  IKY RNNH PGGFIR++ V P +IM R+ H RNAFHYSCWGA+PV A+P E  +  FGF+  GSDG  H F KGYY   +TIPTV+PDGDYVLGWAWYGGTGG L+S   PQYP    YFGDYYSC+FV++RGG  T++Y P+FINDMAQFS  GCMSSTD LG
Sbjct:   51 NCRGPCDLRPIHAKRRYANFWNPAHPAATYSRGQRVTIKYTRNNHAPGGFIRMTFVRPSQIMDRNAHARNAFHYSCWGAHPVRARPNELGKDHFGFTMTGSDGAQHGFGKGYYVTHITIPTVLPDGDYVLGWAWYGGTGGNLKSGTSPQYPGKYSYFGDYYSCSFVKVRGGEYTQTYKPKFINDMAQFSNAGCMSSTDNLG 251          
BLAST of Gcaud191.t1 vs. uniprot
Match: A0A2V3J1Z2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Z2_9FLOR)

HSP 1 Score: 237 bits (605), Expect = 3.040e-74
Identity = 109/205 (53.17%), Postives = 143/205 (69.76%), Query Frame = 0
Query:    2 NCRGPCDLRPVRARPRWANYWSPDHPAATYRRGQRALIKYARNNHGPGGFIRLSLVPPGRIMHRHTHDRNAFHYSCWGAYPVVAKPWERVRGKFGFSFVGSDGGLHRFAKGYYQVSVTIPTVVPDGDYVLGWAWYGGTGGK--LRSSWRPQYPKSMGYFGDYYSCAFVRIRGG-PLTRSYAPRFINDMAQFSKIGCMSSTDELGI 203
            NC GPCDLR ++    +AN+ SPD+P+A Y RGQR  +KY RNNHGPGGFIRL++VP G +M +  H+RNAFHYSCWGA P  A P E     FG+S+VG+DG  H + +GYY  +V+IP V+PDGDYVLGW W+GG G    L +  +P  P  MGY+ D +SCA+VRI GG  L  +Y P F ND++Q++  GC+++ D  GI
Sbjct:   31 NCHGPCDLRAIQGG--YANHASPDNPSAVYSRGQRITVKYTRNNHGPGGFIRLTIVPLGSMMDKAVHERNAFHYSCWGANPQQAGPDELQTDHFGYSYVGNDGEEHPYGQGYYVANVSIPKVIPDGDYVLGWVWFGGIGSVPVLGNYPQPPQPSPMGYYADQWSCAYVRIEGGLALESTYYPAFKNDISQYNPEGCLAANDSPGI 233          
BLAST of Gcaud191.t1 vs. uniprot
Match: A0A2V3IUR8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUR8_9FLOR)

HSP 1 Score: 217 bits (553), Expect = 6.390e-68
Identity = 104/202 (51.49%), Postives = 138/202 (68.32%), Query Frame = 0
Query:    4 RGPCDLRPVRARPRWANYWSPDHPAATYRRGQRALIKYARNNHGPGGFIRLSLVPPGRIMHRHTHDRNAFHYSCWGAYPVVAKPWERVRGKFGFSFVGSDGGLHRFAKGYYQVSVTIPTVVPDGDYVLGWAWYGGTG-GKLRSSWRPQYPKSMGYFGDYYSCAFVRIRGGP-LTRSYAPRFINDMAQFSKIGCMSSTDELGI 203
            RGPC L+   A+  ++N+ S  +PA  Y+RGQ+ ++KY RNNHGPGGFIRLSLV     M ++ H RNAFHYSCWGA+   A P E    +FGF+FVG+DG LH   + YYQ   T+P  VPDG Y+LGW W+GGT  G ++ + RP+ P + G+F DY++C++VRI+GG  LT S  P F+NDM QFS  GCM+  D  G+
Sbjct:   18 RGPCQLKA--AKGGYSNFGSTINPAREYQRGQQFVVKYHRNNHGPGGFIRLSLVTLKDAMSKNVHTRNAFHYSCWGAFLKQAGPNELSTDRFGFNFVGNDGELHSAPRAYYQSFATVPRCVPDGVYILGWVWFGGTSLGPIKDN-RPRRPDNRGFFSDYWACSYVRIKGGASLTSSCDPVFVNDMMQFSTDGCMAGNDSPGV 216          
BLAST of Gcaud191.t1 vs. uniprot
Match: R7QEV6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEV6_CHOCR)

HSP 1 Score: 221 bits (562), Expect = 2.130e-67
Identity = 101/187 (54.01%), Postives = 130/187 (69.52%), Query Frame = 0
Query:   18 WANYWSPDHPAATYRRGQRALIKYARNNHGPGGFIRLSLVPPGRIMHRHTHDRNAFHYSCWGAYPVVAKPWERVRGKFGFSFVGSDGGLHRFAKGYYQVSVTIPTVVPDGDYVLGWAWYGGTGGKLRSSWRPQYPKSMGYFGDYYSCAFVRIRGGPLTRS-YAPRFINDMAQFSKIGCMSSTDELGI 203
            ++N+ SPD+PAA Y+RGQ   +KY RNNHGPGGFIRL+LV P ++M ++ H +NAF+Y+CWGA P  A   E    +FGFSFVGSDG  H   KGYY + V IP+VVPDG YVLGW WYGG GG    + + + P   GYFGDY+SC++V I GG    S + P F NDM+ +S +GCMS+ D  G+
Sbjct:    8 YSNFDSPDNPAAVYQRGQTVRMKYTRNNHGPGGFIRLTLVAPEKMMDKNAHAKNAFYYTCWGANPQAAAANEMEADQFGFSFVGSDGEQHSHPKGYYVMDVKIPSVVPDGKYVLGWVWYGGGGGSAEGNVQQE-PTPYGYFGDYWSCSYVEISGGSALESRHTPVFNNDMSGYSDVGCMSANDAPGV 193          
BLAST of Gcaud191.t1 vs. uniprot
Match: A0A2V3IFC9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFC9_9FLOR)

HSP 1 Score: 178 bits (452), Expect = 4.790e-51
Identity = 80/141 (56.74%), Postives = 99/141 (70.21%), Query Frame = 0
Query:   63 MHRHTHDRNAFHYSCWGAYPVVAKPWERVRGKFGFSFVGSDGGLHRFAKGYYQVSVTIPTVVPDGDYVLGWAWYGGTGGKLRSSWRPQYPKSMGYFGDYYSCAFVRIRGG-PLTRSYAPRFINDMAQFSKIGCMSSTDELG 202
            M +  H  NAFHYSCWGA PV A   E  + ++GF+FVGSDG  H   KGYY V VTIPT +PDG+YV+GW W+GGTGG       PQ PK  GYFGDY++C+FVR+ GG PL+ SY P F NDM+Q+S+ GCMS+ +  G
Sbjct:    1 MEKAVHQHNAFHYSCWGANPVQASSDELEKDRYGFTFVGSDGEQHGAPKGYYTVDVTIPTCIPDGNYVMGWVWFGGTGGTKIERNEPQEPKPWGYFGDYWACSFVRVEGGDPLSASYQPVFQNDMSQYSEEGCMSANNMPG 141          
BLAST of Gcaud191.t1 vs. uniprot
Match: A0A2V3IGZ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGZ3_9FLOR)

HSP 1 Score: 145 bits (366), Expect = 2.960e-38
Identity = 86/207 (41.55%), Postives = 114/207 (55.07%), Query Frame = 0
Query:    3 CRGPCDLRPVRARPRWANYWSPDHPAATYRRGQRALIKYARNNHGP--GGFIRLSLVPPGRIMHRHTHDRNAFHYSCW--GAYPVVAKPWERVRGKFGFSFVGSDGGLHRFAKGY-YQVSVTIPTVVPDGDYVLGWAWYGGTGGKLRSSWRPQYPKSMGYFGDYYSCAFVRIRGGP-LTRSYAPRFINDMAQFSKIGCMSSTDELGI 203
            C GPC        P      SP  PA  +RRG+R +I + RNNHG    GF+R +LVP  ++M ++ H +  F  SCW  G +   ++  ERV         G+D      A+G  Y+V +T+P+V PDG YV GWAWYGG  G  R           G+FGDYYSC+F+RI GG  LT SY+PRFI    Q S+  C+SS D +G+
Sbjct:   42 CYGPCPPLDTYGEPTGI---SPQRPAEVWRRGERQIISWHRNNHGKRESGFVRFTLVPVSKMMDKNAHRKFTFQISCWSSGLHRCYSRS-ERV--------CGND------AEGLAYEVPMTVPSVYPDGVYVFGWAWYGG--GDFRG---------RGFFGDYYSCSFIRIEGGSRLTTSYSPRFIAGTRQSSQSTCISSVDRIGV 219          
BLAST of Gcaud191.t1 vs. uniprot
Match: R7QJR3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJR3_CHOCR)

HSP 1 Score: 134 bits (337), Expect = 4.230e-34
Identity = 80/206 (38.83%), Postives = 106/206 (51.46%), Query Frame = 0
Query:    2 NCRGPCDLRPVRARPRWANYWSPDHPAATYRRGQRALIKYARNNHGPG--GFIRLSLVPPGRIMHRHTHDRNAFHYSCWGAYPVVAKPWERVRGKFGFSFVGSDG-GLHRFAKGYYQVSVTIPTVVPDGDYVLGWAWYGGTGGKLRSSWRPQYPKSMGYFGDYYSCAFVRIRGGP-LTRSYAPRFINDMAQFSKIGCMSSTDELGI 203
            +C GPC        P      SP  PAAT+RRG++  + + RNNHG G  GF+RL+LVP  ++M    H +  F  SCW +     K   +          G+D  G+       Y+  +T+PT  PDG YVLGWAWYGG   K  S           +FGDYYSC+FVRI GG  L+ S  P F   +    + GC+SSTD +G+
Sbjct:   44 DCYGPCPALDTYGDPTGI---SPSRPAATWRRGEQKTVSWHRNNHGKGESGFVRLTLVPVDKMMDSRAHKKFTFQISCWSSGLHKCKSRNK-------HVCGNDKEGMA------YRAPITVPTAYPDGIYVLGWAWYGGGDFKHDS-----------FFGDYYSCSFVRIEGGARLSSSSKPVFAPGLNTKHRDGCLSSTDRVGV 222          
BLAST of Gcaud191.t1 vs. uniprot
Match: A0A2V3IVU4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVU4_9FLOR)

HSP 1 Score: 133 bits (335), Expect = 6.790e-34
Identity = 78/201 (38.81%), Postives = 103/201 (51.24%), Query Frame = 0
Query:    3 CRGPCDLRPVRARPRWANYWSPDHPAATYRRGQRALIKYARNNHGPGGFIRLSLVPPGRIMHRHTHDRNAFHYSCWGAYPVVAKPWERVRGKFGFSFVGSDGGLHRFAKGYYQVSVTIPTVVPDGDYVLGWAWYGGTGGKLRSSWRPQYPKSMGYFGDYYSCAFVRIRGGPLTRSYAPRFINDMAQFSKIGCMSSTDELGI 203
            C GPC     R   R  N      PAAT+ RG R  + Y++NNH  GGF+RL+LVP   +M    H+  AFHYSCW +        E+ R          D G  R    Y + ++T+PT+ PDG YVLGW+WYGG  G              G +GDYY C++VRI+GGPLT +Y   F+         GC ++ D LG+
Sbjct:   44 CGGPCPDYNFRYDMRAEN------PAATWERGSRVTVHYSKNNH-VGGFMRLTLVPLDEMMRTEAHEALAFHYSCWSSELYYCDNKEQHR----------DCGYDRDNLAY-KTTITVPTIYPDGVYVLGWSWYGGGEGH-------------GDYGDYYDCSYVRIQGGPLTDTYHAMFVPGPRYPD--GCQAAVDRLGM 211          
BLAST of Gcaud191.t1 vs. uniprot
Match: A0A1X6P6Q1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6Q1_PORUM)

HSP 1 Score: 124 bits (312), Expect = 2.890e-30
Identity = 77/202 (38.12%), Postives = 106/202 (52.48%), Query Frame = 0
Query:    2 NCRGPCDLRPVRARPRWANYWSPDHPAATYRRGQRALIKYARNNHGPGGFIRLSLVPPGRIMHRHTHDRNAFHYSCWGAYPVVAKPWERVRGKFGFSFVGSDGGLHRFAKGYYQVSVTIPTVVPDGDYVLGWAWYGGTGGKLRSSWRPQYPKSMGYFGDYYSCAFVRIRGGPLTR-SYAPRFINDMAQFSKIGCMSSTDELG 202
            NC GPC   P     R     S   PAATYRRGQ   +++ARNNH  GGF+R +LVP G +M    H++ AF + CW A     K     R +F       D  L +     YQ  +TIP++ PDGDYVL +AWYGG    +R++ +P+    +   GDYY C++VRI GG +   ++ P F           C++S + LG
Sbjct:   59 NCPGPC---PNIMLKRHGVGSSSSQPAATYRRGQTVRVRWARNNH-EGGFVRWALVPVGSMMDAKVHEQMAFRWGCWSAGRFACKGGAH-RKRFCI-----DDALDKPVGHAYQDWLTIPSIYPDGDYVLSFAWYGG----VRNN-KPKRRPVLSSLGDYYDCSYVRIAGGGVVEPAHTPTFRPGTRTRFPNRCVASVNRLG 245          
BLAST of Gcaud191.t1 vs. uniprot
Match: A0A2V3IQV8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQV8_9FLOR)

HSP 1 Score: 126 bits (316), Expect = 3.580e-30
Identity = 74/203 (36.45%), Postives = 99/203 (48.77%), Query Frame = 0
Query:    2 NCRGPCDLRPVRARPRWANYWSPDHPAATYRRGQRALIKYARNNHGPGGFIRLSLVPPGRIMHRHTHDRNAFHYSCWGAYPVVAKPWERVRGKFGFSFVGSDGGLHRFAKGYYQVSVTIPTVVPDGDYVLGWAWYGGTGGKLRSSWRPQYPKSMGYFGDYYSCAFVRIRGG-PLTRSYAPRFINDMAQFSKIGCMSSTDELGI 203
            NC GPC    + A         P +P   ++RG    + + RNNH  GGF+R SLVP  +   +H H + AFHY+CW         ++  R          D    R  + Y ++ + IP V PDGDYVLGW WYGG  G              G+FGDYY CA+VR+ GG P+  SY P F        + GC ++ D+LGI
Sbjct:   47 NCPGPCPNYNIAADA------DPSNPTTVFQRGGYHRVVWTRNNH-EGGFVRWSLVPLNKRDSKHWHAKMAFHYNCWSVGRFTCNDFDFHR----------DCHYDRQNEAYSKM-LYIPPVFPDGDYVLGWTWYGGGVG-------------YGHFGDYYDCAYVRVSGGEPVQESYVPTFSAGGGSTYEDGCEATVDDLGI 218          
The following BLAST results are available for this feature:
BLAST of Gcaud191.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IS62_9FLOR1.540e-10467.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1Z2_9FLOR3.040e-7453.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUR8_9FLOR6.390e-6851.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEV6_CHOCR2.130e-6754.01Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IFC9_9FLOR4.790e-5156.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGZ3_9FLOR2.960e-3841.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJR3_CHOCR4.230e-3438.83Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IVU4_9FLOR6.790e-3438.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P6Q1_PORUM2.890e-3038.12Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V3IQV8_9FLOR3.580e-3036.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_658_length_20183_cov_5.262493contigNODE_658_length_20183_cov_5.262493:12337..14945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud191.t1Gcaud191.t1Gracilaria caudata M_176_S67 malemRNANODE_658_length_20183_cov_5.262493 12337..14945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud191.t1 ID=Gcaud191.t1|Name=Gcaud191.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=212bp
MNCRGPCDLRPVRARPRWANYWSPDHPAATYRRGQRALIKYARNNHGPGG
FIRLSLVPPGRIMHRHTHDRNAFHYSCWGAYPVVAKPWERVRGKFGFSFV
GSDGGLHRFAKGYYQVSVTIPTVVPDGDYVLGWAWYGGTGGKLRSSWRPQ
YPKSMGYFGDYYSCAFVRIRGGPLTRSYAPRFINDMAQFSKIGCMSSTDE
LGIGMEVDSFP*
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