Gcaud1781.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1781.t1
Unique NameGcaud1781.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length200
Homology
BLAST of Gcaud1781.t1 vs. uniprot
Match: A0A2V3IUH1_9FLOR (Polyketide_cyc domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUH1_9FLOR)

HSP 1 Score: 256 bits (653), Expect = 5.570e-84
Identity = 123/197 (62.44%), Postives = 157/197 (79.70%), Query Frame = 0
Query:    1 MHNTTNIAFTTTGVFIPRRRAFRYAPLTHRKAPPIFTAPTAEMVRVSVPLKIEAPSRYCFQLFSDLSTMSEWSSALEAVERDAEDPSFSEWKFAWNGVRLSWRAKDVENVQEQSSDIPSIRWRSVSGLVHTGAVQFEDLQQG-ATNLVMTVDYDIESLLASIMRSSLVSSFVEGAIESDLSKFRSYALRKYRKARMS 196
            MH T N AF  +  F+P+   F  A +T  +A P F+APT +MVRVSVPLKIEAP++YC+ LF+DLS M EWSS LEAVERDA+DP FS+WKF+WNG+RL WRAKDV N ++   D P + W+SVSGLVHTG VQF  L+Q  +T +++TV YDI++LLA+IM+SSLVS+FV+ AIE+DLSKFRSYALRKYR+A++S
Sbjct:    1 MHPTRNAAFAFSSPFLPKATPFSSAHVTSTRAAPKFSAPTMQMVRVSVPLKIEAPNQYCYSLFADLSNMPEWSSTLEAVERDAQDPLFSDWKFSWNGIRLKWRAKDVLNDEQNHDDAPEVCWKSVSGLVHTGVVQFHPLEQDKSTTMILTVHYDIDNLLATIMQSSLVSNFVQSAIENDLSKFRSYALRKYRRAKIS 197          
BLAST of Gcaud1781.t1 vs. uniprot
Match: UPI001E1E07DE (uncharacterized 17.2 kDa protein in melC2-rnhH intergenic region-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E07DE)

HSP 1 Score: 161 bits (408), Expect = 1.040e-46
Identity = 79/157 (50.32%), Postives = 103/157 (65.61%), Query Frame = 0
Query:   40 TAEMVRVSVPLKIEAPSRYCFQLFSDLSTMSEWSSALEAVERDAEDPSFSEWKFAWNGVRLSWRAKDVENVQEQSSDIPSIRWRSVSGLVHTGAVQFEDLQQGATNLVMTVDYDIESLLASIMRSSLVSSFVEGAIESDLSKFRSYALRKYRKARMS 196
            T + V+V VP+ +E P    F LF+DL +MS+WSS L  V RDA D + S W F WNGVRLSW A+D + ++     +  I W SV GL H G V F +L   AT L MTVDYD+ SLLA IM +  + +FVE AI++DL KFR+YALR  R+A+M+
Sbjct:   52 TMKFVQVRVPVPVEVPREMAFGLFADLDSMSQWSSTLAKVSRDAHDHTLSHWNFEWNGVRLSWSARDKDRIE-----LERISWESVDGLTHKGRVDFVELGPTATELTMTVDYDVASLLAVIMETRFIQNFVESAIKADLEKFRTYALRMQRRAKMN 203          
BLAST of Gcaud1781.t1 vs. uniprot
Match: A0A5J4Z3L0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3L0_PORPP)

HSP 1 Score: 103 bits (257), Expect = 3.720e-24
Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 0
Query:   55 PSRYCFQLFSDLSTMSEWSSALEAVERDAEDPSFSEWKFAWNGVRLSWRAKDVENVQEQSSDIPSIRWRSVSGLVHTGAVQFE-DLQQGA------TNLVMTVDYDIESLLASIMRSSLVSSFVEGAIESDLSKFRSYALRKYRKARM 195
            PS + +  FS+ S M EWSSA++ V+RDA +P  + W+     + L W A D E +  +      I W+S++GL H G V F  +  +G+      T ++M VDYD++S LAS+ RS  VS+ +E A  ++L  FR Y L  +RK RM
Sbjct:   54 PSDFAYARFSNFSNMPEWSSAVKRVKRDAAEPRKTSWEARVQSIPLQWEAMDEEVIVGKL-----ISWKSLTGLTHRGRVSFHHNGDKGSRGDGSGTMIIMRVDYDVQSFLASMARSRFVSNIIEQACAAELKNFRQYCLLAHRKERM 196          
BLAST of Gcaud1781.t1 vs. uniprot
Match: UPI00168975C7 (SRPBCC family protein n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI00168975C7)

HSP 1 Score: 89.7 bits (221), Expect = 2.190e-19
Identity = 48/141 (34.04%), Postives = 82/141 (58.16%), Query Frame = 0
Query:   47 SVPLKIEAPSRYCFQLFSDLSTMSEWSSALEAVERDAEDPSFSEWKFAWNGVRLSWRAKDVENVQEQSSDIPSIRWRSVSGLVHTGAVQFEDLQQGATNLVMTVDYDIESLLASIMRSSLVSSFVEGAIESDLSKFRSYAL 187
            SV + ++ P    + L+SDL  M  W   +++V    E+P  S WK A  G+  +W ++    V EQ      I+W SV GL + GA++F D ++G+T + +TV YD+ +++   M +  +   VEG +++DL++FR+YAL
Sbjct:    8 SVLVDVDVPVEMAWGLWSDLEQMPRWMKWIDSVTVLPENPELSRWKLATRGLEFTWLSRITNLVPEQI-----IQWESVDGLPNRGAIRFYD-RKGSTTVKLTVSYDVPAIV-KWMDNLFLGRVVEGELQADLNRFRTYAL 141          
The following BLAST results are available for this feature:
BLAST of Gcaud1781.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IUH1_9FLOR5.570e-8462.44Polyketide_cyc domain-containing protein n=1 Tax=G... [more]
UPI001E1E07DE1.040e-4650.32uncharacterized 17.2 kDa protein in melC2-rnhH int... [more]
A0A5J4Z3L0_PORPP3.720e-2438.51Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
UPI00168975C72.190e-1934.04SRPBCC family protein n=1 Tax=Pseudanabaena sp. FA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 43..190
e-value: 3.7E-23
score: 83.9
IPR019587Polyketide cyclase/dehydrasePFAMPF10604Polyketide_cyc2coord: 43..184
e-value: 2.4E-9
score: 37.6
NoneNo IPR availablePANTHERPTHR33824:SF7POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEINcoord: 29..192
NoneNo IPR availablePANTHERPTHR33824POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEINcoord: 29..192
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 43..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_338_length_29361_cov_4.567031contigNODE_338_length_29361_cov_4.567031:15363..15962 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1781.t1Gcaud1781.t1Gracilaria caudata M_176_S67 malemRNANODE_338_length_29361_cov_4.567031 15363..15962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1781.t1 ID=Gcaud1781.t1|Name=Gcaud1781.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=200bp
MHNTTNIAFTTTGVFIPRRRAFRYAPLTHRKAPPIFTAPTAEMVRVSVPL
KIEAPSRYCFQLFSDLSTMSEWSSALEAVERDAEDPSFSEWKFAWNGVRL
SWRAKDVENVQEQSSDIPSIRWRSVSGLVHTGAVQFEDLQQGATNLVMTV
DYDIESLLASIMRSSLVSSFVEGAIESDLSKFRSYALRKYRKARMSGEI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR019587Polyketide_cyclase/dehydratase