Gcaud1711.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1711.t1
Unique NameGcaud1711.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length202
Homology
BLAST of Gcaud1711.t1 vs. uniprot
Match: A0A2V3IZY5_9FLOR (Protein SYS1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZY5_9FLOR)

HSP 1 Score: 295 bits (755), Expect = 1.520e-99
Identity = 141/175 (80.57%), Postives = 162/175 (92.57%), Query Frame = 0
Query:    1 MAVNGSFYGRERFDPILILAQIVLLQACFYTSYLVLLVIFNYATGTTTSITDQIFNHAYVTLRHFPGWVSCTALLISACGPAAVAFVALVGRAKRCVDFACTLFVSHVIATTVHSGFPNTLMWWMLNVIATAGLATVGEAISLRVELREIALPRDDNRRADNAKNSTDLEAALND 175
            MAVNG+FYGR+RFDPILILAQIVLLQA FYTSYL+LLV+FNYATGTT SITDQ+FNH Y+TLRHFPGWV+CTALLISA GPAA+AFVALVGRAKRC+DFACTLF+SH+IATTVHSGFPNT+MWW+LN++ATA L+TVGEA+SLR+ELREIA+PRD+  R D     TD+EAALND
Sbjct:    1 MAVNGTFYGRDRFDPILILAQIVLLQASFYTSYLLLLVMFNYATGTTASITDQMFNHTYITLRHFPGWVTCTALLISAAGPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSGFPNTIMWWLLNIVATAALSTVGEAVSLRLELREIAIPRDNPTRTDKRDQPTDIEAALND 175          
BLAST of Gcaud1711.t1 vs. uniprot
Match: A0A7S0ZK56_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZK56_9RHOD)

HSP 1 Score: 113 bits (282), Expect = 9.200e-28
Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 0
Query:    4 NGSFYGRERFDPILILAQIVLLQACFYTSYLVLLVIFNYATGTTTSITDQIFNHAYVTLRHFPGWVSCTALLISACGPAAVAFVALVGRAKRCVDFACTLFVSHVIATTVHSG-FPNTLMWWMLNVIATAGLATVGEAISLRV-ELREIALPRDDNRRADNAKNS 166
            +G+FYGRE F+P LIL  IVLLQ CFY SY +LL   N   G  +S+ +Q+F    +T    PGW +  + ++ + GP   A V  + RAK+C+D+  TL++ H +A T +SG  P    WW + ++    ++   E + LR+ ++REI+L    N   +N+K S
Sbjct:   29 DGAFYGRESFNPWLILFHIVLLQFCFYISYSILLFTLNRMGGIQSSVVEQMFQPVLLTFSTIPGWFTICSFVLCSIGPYLTALVFFIRRAKKCLDYTVTLYIIHFVACTSYSGRIPTHWAWWFVIILTATIVSLSAEFLCLRLFDMREISL----NTTQNNSKES 189          
BLAST of Gcaud1711.t1 vs. uniprot
Match: UPI00125D4387 (protein SYS1 homolog n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125D4387)

HSP 1 Score: 96.3 bits (238), Expect = 7.610e-22
Identity = 60/150 (40.00%), Postives = 90/150 (60.00%), Query Frame = 0
Query:    7 FYGRERFDPILILAQIVLLQACFYTSYLVLLVIFNYATGTTTSITDQI--FNHAYVTLRHFPGWVSCTALLISACGPAAVAFVALVGRAKRCVDFACTLFVSHVIATTVHSGFPNTLMWWMLNVIATAGLATVGEAISLRVELREIALPR 154
            FYG   +DP LI+AQIV LQ C Y  YL L +      GT  S    +  F++A VT+    GW   T+ ++S+   A    V ++ RAK+C+DFA TL+V H+  + V+ G+P++L WW++NV   A +A +GE + ++ ELREI + R
Sbjct:    2 FYGAVVWDPWLIVAQIVCLQ-CLY--YLTLGIFMAGLVGTRVSRISLVYFFDYASVTVSTNTGWCVITSFILSSIAGAGY-LVYVIERAKKCLDFASTLYVIHLFTSLVYGGWPSSLTWWVVNVTGFAVMALLGEYLCIKRELREIPISR 147          
BLAST of Gcaud1711.t1 vs. uniprot
Match: A0A0A0KC23_CUCSA (Protein SYS1 homolog n=10 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0KC23_CUCSA)

HSP 1 Score: 92.0 bits (227), Expect = 3.290e-20
Identity = 55/150 (36.67%), Postives = 88/150 (58.67%), Query Frame = 0
Query:    7 FYGRERFDPILILAQIVLLQACFYTSYLVLLVIFNYATGTTTSITDQI--FNHAYVTLRHFPGWVSCTALLISACGPAAVAFVALVGRAKRCVDFACTLFVSHVIATTVHSGFPNTLMWWMLNVIATAGLATVGEAISLRVELREIALPR 154
            FYG   +DP LI+AQIV LQ CFY  YL L ++     GT  S    +  F++A +++    GW    + L+SA   A    V L+ RAK+C+DFA TL++ H+    ++ G+P+++ WW++N      ++ +GE + ++ ELREI + R
Sbjct:    2 FYGAVVWDPWLIVAQIVCLQ-CFY--YLTLGILLATLVGTRVSRISLVYFFDYATISVSTATGWCVIASFLLSAIAGAGY-LVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITR 147          
BLAST of Gcaud1711.t1 vs. uniprot
Match: UPI001CB8A2EC (protein SYS1 homolog n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8A2EC)

HSP 1 Score: 91.3 bits (225), Expect = 6.530e-20
Identity = 53/150 (35.33%), Postives = 88/150 (58.67%), Query Frame = 0
Query:    7 FYGRERFDPILILAQIVLLQACFYTSYLVLLVIFNYATGTTTSITDQI--FNHAYVTLRHFPGWVSCTALLISACGPAAVAFVALVGRAKRCVDFACTLFVSHVIATTVHSGFPNTLMWWMLNVIATAGLATVGEAISLRVELREIALPR 154
            FYG   +DP LI+AQIV +Q  +Y +  V + +F    GT  S    +  F+ A VTL    GW    + ++S+   A +  + L+ RAK+C+DFA TL++ H+    ++ G+P+++ WW++N    A +A +GE + ++ ELREI + R
Sbjct:    2 FYGTVVWDPWLIVAQIVCIQCLYYITLGVFMGVF---VGTRVSKLSLVYFFDFATVTLSTVTGWCVIASFILSSVAGAGI-LLYLIERAKKCLDFAATLYIIHLFICILYGGWPSSITWWVVNGTGLAVMALLGEYLCIQRELREIPISR 147          
BLAST of Gcaud1711.t1 vs. uniprot
Match: A0A830CU09_9LAMI (Protein sys1 homolog n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CU09_9LAMI)

HSP 1 Score: 90.9 bits (224), Expect = 1.240e-19
Identity = 55/146 (37.67%), Postives = 84/146 (57.53%), Query Frame = 0
Query:    7 FYGRERFDPILILAQIVLLQACFYTSYLVLLVIFNYATGTTTSITDQIFNHAYVTLRHFPGWVSCTALLISACGPAAVAFVALVGRAKRCVDFACTLFVSHVIATTVHSGFPNTLMWWMLNVIATAGLATVGEAISLRVELREIAL 152
            FYG   +DP LI+AQIV LQ  +Y S  + L I      T  S+    F+ A VT     GW    ++ +S+   A    V LV RAK+C+DFA TL++ H+  +  + G+P ++ WW++N+ + A +A +GE + +R ELREI +
Sbjct:    2 FYGTVAWDPWLIVAQIVCLQCLYYISLGLFLSILVGPRVTKMSLV-YFFDFATVTASTSTGWCVVASIFLSSIAGAGF-LVYLVERAKKCLDFAATLYIIHLFISFSYGGWPTSVTWWVVNITSLAVMALLGEYLCMRRELREIPI 145          
BLAST of Gcaud1711.t1 vs. uniprot
Match: A0A0E0JKN8_ORYPU (Uncharacterized protein n=8 Tax=Poaceae TaxID=4479 RepID=A0A0E0JKN8_ORYPU)

HSP 1 Score: 89.4 bits (220), Expect = 3.610e-19
Identity = 54/148 (36.49%), Postives = 84/148 (56.76%), Query Frame = 0
Query:    7 FYGRERFDPILILAQIVLLQACFYTSYLVLLVIFNYATGTTTSITDQIFNHAYVTLRHFPGWVSCTALLISACGPAAVAFVALVGRAKRCVDFACTLFVSHVIATTVHSGFPNTLMWWMLNVIATAGLATVGEAISLRVELREIALPR 154
            FYG   +DP LI++QIV LQ C Y   L LL+     T         +F+ A +T R   GW    A L++A   AA   + ++ RAK+C+DFA TL++ H+    V+ G+P +  WW++N+   A ++ +GE + +R EL+EI + R
Sbjct:    2 FYGAMVWDPWLIVSQIVCLQ-CLYYLALGLLMALLVGTRVPRLTLLYLFDFATLTPRTTTGWCVIAAFLLAAAAGAAF-MLHVIERAKKCLDFAATLYIIHLFICIVYGGWPASFTWWVVNIAGLAIMSLLGEYLCIRRELKEIPISR 147          
BLAST of Gcaud1711.t1 vs. uniprot
Match: A0A251RW17_HELAN (Putative integral membrane protein SYS1-related protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251RW17_HELAN)

HSP 1 Score: 88.6 bits (218), Expect = 7.140e-19
Identity = 56/150 (37.33%), Postives = 86/150 (57.33%), Query Frame = 0
Query:    7 FYGRERFDPILILAQIVLLQACFYTSYLVLLVIFNYATGTTTSITDQI--FNHAYVTLRHFPGWVSCTALLISACGPAAVAFVALVGRAKRCVDFACTLFVSHVIATTVHSGFPNTLMWWMLNVIATAGLATVGEAISLRVELREIALPR 154
            FYG   +DP LI+AQIV +Q C Y  YL L VI     G   S    +  F++A VTL    GW   T+ ++S+   A    +  + RAK+C+DFA TL++ H+    ++ G+P+++ WW++N    A  A +GE + ++ ELREI + R
Sbjct:    2 FYGSVVWDPWLIVAQIVCIQ-CLY--YLTLGVIMTVLVGARVSRMSLVYFFDYATVTLSTVTGWCVITSFILSSIAGAGF-LLYWIERAKKCLDFAATLYIIHLGICVLYGGWPSSITWWVVNGTGLAITALLGEYLCIKRELREIPISR 147          
BLAST of Gcaud1711.t1 vs. uniprot
Match: A0A2I4GMD2_JUGRE (protein SYS1 homolog isoform X1 n=10 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4GMD2_JUGRE)

HSP 1 Score: 89.0 bits (219), Expect = 9.810e-19
Identity = 53/148 (35.81%), Postives = 84/148 (56.76%), Query Frame = 0
Query:    7 FYGRERFDPILILAQIVLLQACFYTSYLVLLVIFNYATGTTTSITDQIFNHAYVTLRHFPGWVSCTALLISACGPAAVAFVALVGRAKRCVDFACTLFVSHVIATTVHSGFPNTLMWWMLNVIATAGLATVGEAISLRVELREIALPR 154
            FYG   +DP LI+AQIV LQ  +Y +  V L +         S+ +  F++A VT     GW    + L S+   AA    +L+ RAK+C+DF+ T++++H+    V+ G+P+++ WW+LN    A +A +G  +  R ELREI + R
Sbjct:    2 FYGSVVWDPWLIVAQIVCLQCLYYLTLGVFLTMLVGNRVPRMSL-EYFFDYATVTASTVTGWCVIASFLFSSLAGAAY-MTSLIARAKKCLDFSATVYITHLFICIVYGGWPSSITWWVLNGTGIAVMALLGAYLCRRRELREIPITR 147          
BLAST of Gcaud1711.t1 vs. uniprot
Match: A0A6S7MXJ5_LACSI (Protein SYS1 homolog n=4 Tax=Lactuca TaxID=4235 RepID=A0A6S7MXJ5_LACSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.410e-18
Identity = 51/150 (34.00%), Postives = 86/150 (57.33%), Query Frame = 0
Query:    7 FYGRERFDPILILAQIVLLQACFYTSYLVLLVIFNYATGTTTSITDQI--FNHAYVTLRHFPGWVSCTALLISACGPAAVAFVALVGRAKRCVDFACTLFVSHVIATTVHSGFPNTLMWWMLNVIATAGLATVGEAISLRVELREIALPR 154
            FYG   +DP LI+AQI+ +Q C Y  YL L        GT  S+   +  F++A +++    GW    + ++S+   A    + L+ RAK+C+DFA TL++ H+    ++ G+P ++ WW++N    A +A +GE + ++ ELREI + R
Sbjct:    2 FYGSVVWDPWLIVAQIICIQ-CLY--YLTLGFFMAILVGTRVSMMSLVYFFDYATISISTVTGWCVIASFILSSVAGAGF-LLYLIERAKKCLDFAATLYIIHLFICIIYGGWPTSITWWIVNGTGLALMALLGEYLCIKRELREIPISR 147          
The following BLAST results are available for this feature:
BLAST of Gcaud1711.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZY5_9FLOR1.520e-9980.57Protein SYS1-like n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A7S0ZK56_9RHOD9.200e-2837.58Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
UPI00125D43877.610e-2240.00protein SYS1 homolog n=2 Tax=Ipomoea TaxID=4119 Re... [more]
A0A0A0KC23_CUCSA3.290e-2036.67Protein SYS1 homolog n=10 Tax=Cucurbitaceae TaxID=... [more]
UPI001CB8A2EC6.530e-2035.33protein SYS1 homolog n=1 Tax=Erigeron canadensis T... [more]
A0A830CU09_9LAMI1.240e-1937.67Protein sys1 homolog n=1 Tax=Phtheirospermum japon... [more]
A0A0E0JKN8_ORYPU3.610e-1936.49Uncharacterized protein n=8 Tax=Poaceae TaxID=4479... [more]
A0A251RW17_HELAN7.140e-1937.33Putative integral membrane protein SYS1-related pr... [more]
A0A2I4GMD2_JUGRE9.810e-1935.81protein SYS1 homolog isoform X1 n=10 Tax=Juglandac... [more]
A0A6S7MXJ5_LACSI1.410e-1834.00Protein SYS1 homolog n=4 Tax=Lactuca TaxID=4235 Re... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019185Integral membrane protein SYS1-relatedPFAMPF09801SYS1coord: 10..152
e-value: 1.8E-30
score: 106.0
IPR019185Integral membrane protein SYS1-relatedPANTHERPTHR12952SYS1coord: 8..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..186
NoneNo IPR availablePANTHERPTHR12952:SF0PROTEIN SYS1 HOMOLOGcoord: 8..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..145
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 146..201
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 22..44
NoneNo IPR availableTMHMMTMhelixcoord: 65..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_851_length_17024_cov_4.098683contigNODE_851_length_17024_cov_4.098683:14120..14725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1711.t1Gcaud1711.t1Gracilaria caudata M_176_S67 malemRNANODE_851_length_17024_cov_4.098683 14120..14725 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1711.t1 ID=Gcaud1711.t1|Name=Gcaud1711.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=202bp
MAVNGSFYGRERFDPILILAQIVLLQACFYTSYLVLLVIFNYATGTTTSI
TDQIFNHAYVTLRHFPGWVSCTALLISACGPAAVAFVALVGRAKRCVDFA
CTLFVSHVIATTVHSGFPNTLMWWMLNVIATAGLATVGEAISLRVELREI
ALPRDDNRRADNAKNSTDLEAALNDDAHPAASSTTTTKSAQIESIALTQP
V*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019185Integral_membrane_SYS1-rel