Gcaud1603.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1603.t1
Unique NameGcaud1603.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length468
Homology
BLAST of Gcaud1603.t1 vs. uniprot
Match: A0A2V3IT31_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT31_9FLOR)

HSP 1 Score: 216 bits (550), Expect = 4.420e-61
Identity = 167/455 (36.70%), Postives = 262/455 (57.58%), Query Frame = 0
Query:    8 DEQPLVTVKDYRPSCHSSSSDAPESTDDEFDFEVDKPCPFTDVPKKSRFGKLFFTRNAKGLWGERPIVTTVESPFRLRCWAISGPDELCDERVEGEPFNMDDDVIVPMTGLSLLSSKRGVFHRRRRPKASSGKMSPLQKSHVKVIPPPYPEPPNRSLTVTSR---VTRSPGVDVNDMLNTEGRMVEDPPGLSDTSDSESLLSVNYKPSTDSSKSTSINFCLRSEED---SSSEESQADPPS-PERSSRLYSEHSRMENIYDSSFLPATAVSNLAQSQAQVQSLTYQVEQLMSLANNLQDQITACNREKIHLQQQIQVLQTTQCSSEESTSPQSSTTETSQETSPRRSSFSKKCFGREEERLRMELLEEKQKSAGIQLENERLLGVIFRLKCEMDLEH----CLHERFQKKAVSEQSGGRWQKIREVVRSSSGLWDSRDASKRAAYQRGWPFRRSK 451
            ++QPL++V DYRPS +  +SD  E  D+        P PF ++P ++ +G    TR +KG+W E+P +T + SP  LR W I+GPDE  D+  E +   MDD+V+V    + +L ++  + ++R  P AS GK+SPLQK  + V  P  P   N ++        ++RS  V V+ M+NT GR V DPP LS++S S       Y+  +D   S  INF L S  D   S S+ S ++ PS P ++    S   R  ++     +P+       Q+QAQ+ +LT +VEQL++L  +LQ Q++ C ++K +++QQ+   + T+ S++  ++P  ++   S+E SPRR+S  K+   RE++R+RMEL+EEKQ++A +Q ENERLLGVI +LK E+D EH     L+E       S    G+ QK + +++ S     S+DA K+   +R W F R+K
Sbjct:   39 EQQPLLSVTDYRPSANYVTSD--EEDDEHHPPAQPAPNPFANLPCETVYGAPHSTRYSKGIWTEKPRITHLHSPQPLRLWTINGPDESRDDDEEQQIVYMDDNVLVYTKNIQMLRAQWEILNQRPGPPASVGKLSPLQKFQISVAHPVKPF--NHAVIPLGNPLSLSRSCVVSVSGMINTHGRTVPDPPALSESSHSTHQTDSPYEQLSDEHSSV-INFRLDSSSDDHHSESDLSDSNIPSLPAKAPAPTSPAHR--DLGGPLHVPSP------QAQAQIDNLTARVEQLLALNTHLQQQLSDCRKDKANVEQQLSAAKATENSNQ--SAPPRTSDSPSEERSPRRASMKKRRNAREDDRIRMELMEEKQRTAEMQSENERLLGVILKLKRELDGEHERNMALYETRFGAEPSVLDKGK-QKAKSLLQRSRSA--SKDAKKKVEQRRRWIFGRTK 475          
The following BLAST results are available for this feature:
BLAST of Gcaud1603.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IT31_9FLOR4.420e-6136.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 280..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_909_length_16211_cov_4.635174contigNODE_909_length_16211_cov_4.635174:3714..5117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1603.t1Gcaud1603.t1Gracilaria caudata M_176_S67 malemRNANODE_909_length_16211_cov_4.635174 3714..5117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1603.t1 ID=Gcaud1603.t1|Name=Gcaud1603.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=468bp
MTQLLPKDEQPLVTVKDYRPSCHSSSSDAPESTDDEFDFEVDKPCPFTDV
PKKSRFGKLFFTRNAKGLWGERPIVTTVESPFRLRCWAISGPDELCDERV
EGEPFNMDDDVIVPMTGLSLLSSKRGVFHRRRRPKASSGKMSPLQKSHVK
VIPPPYPEPPNRSLTVTSRVTRSPGVDVNDMLNTEGRMVEDPPGLSDTSD
SESLLSVNYKPSTDSSKSTSINFCLRSEEDSSSEESQADPPSPERSSRLY
SEHSRMENIYDSSFLPATAVSNLAQSQAQVQSLTYQVEQLMSLANNLQDQ
ITACNREKIHLQQQIQVLQTTQCSSEESTSPQSSTTETSQETSPRRSSFS
KKCFGREEERLRMELLEEKQKSAGIQLENERLLGVIFRLKCEMDLEHCLH
ERFQKKAVSEQSGGRWQKIREVVRSSSGLWDSRDASKRAAYQRGWPFRRS
KSRKQKKTASSLDHSSP*
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