Gcaud1586.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1586.t1
Unique NameGcaud1586.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length385
Homology
BLAST of Gcaud1586.t1 vs. uniprot
Match: A0A2V3IHX9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHX9_9FLOR)

HSP 1 Score: 525 bits (1353), Expect = 1.480e-184
Identity = 246/366 (67.21%), Postives = 306/366 (83.61%), Query Frame = 0
Query:   19 VAQTPSTELLGDPAVDSDDGEFDEAEKAPPRLPSAYRAKPSVIEFSPVSNQDGETFNDEEEEILDPCGLSPRGVLSKGVPAIIESLKFDAVELHVEGYETTRLEIFAPAECFAALLSEGSEPGTWEVTDKSETVRCAQHIRLLKKFRLRAATEIDRAEKVMVAFFDANTPSHLLQQTNALGYDVFSVEELIESKELALQRQLKSDGWSFWGDAQVVLSLDFLKHVSKKEMISIEFGVDDEAPRRNRMFFVISRSLPQGAWSPIYKSEIRTRGEADKFEPVSIPCQDFHGGDESKNFRLELHRWYKNGRTRPLGFMQTSVQKMKSLESNSSMYWWPAEDGISSAKIIVLQALTSPREARFHLLLSTS 384
            V   PS E LG   VDS+D EFDEAEKAPPRLPSAYRAKPSVIEFSPVS+ +G+      EEI DPC LSPRG+L+ G+ A+IESLKFD +ELH+EG+ETT  E+F+PAECFA L SEG+ PGTWEVT KSE VRC+ HI+L+KKFRLRAATE+DR+EK+++AFF+++TPSHLL  + ALGY+VFS  ELIE+K L L+R+L++D W+FWG+AQVVLSLD +KHVSKKEMI+IEFG+  +APRRNRMFFV+SR LPQG WSPIYKSE+RTR +   F  V + C DFHGGDESKNFRLELHRWYKNGRTRPLGF+QTS++K+K++ +++ +YWWPA+DGI+SAK+ +++AL SP E RF   L++S
Sbjct:   20 VVPVPSMEALGTADVDSEDDEFDEAEKAPPRLPSAYRAKPSVIEFSPVSD-NGDNSLKVTEEIYDPCNLSPRGLLNTGISALIESLKFDVLELHIEGFETTVFEVFSPAECFAVLFSEGAVPGTWEVTGKSEAVRCSPHIKLVKKFRLRAATELDRSEKIVIAFFNSSTPSHLLSPSRALGYEVFSASELIEAKRLTLKRRLRNDRWNFWGNAQVVLSLDVIKHVSKKEMITIEFGLTSDAPRRNRMFFVLSRGLPQGTWSPIYKSEVRTRDDMASFNAVCLECLDFHGGDESKNFRLELHRWYKNGRTRPLGFIQTSLEKLKTMHASTYLYWWPADDGITSAKVTLVRALASPSECRFQFSLTSS 384          
BLAST of Gcaud1586.t1 vs. uniprot
Match: A0A1X6NPL0_PORUM (C2 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NPL0_PORUM)

HSP 1 Score: 145 bits (365), Expect = 1.650e-35
Identity = 95/337 (28.19%), Postives = 154/337 (45.70%), Query Frame = 0
Query:  103 SLKFDAVELHVEGYETTRLEIFAPAECFAALLSEGSEPGTWEVTDKSETVRCAQHIRLLKKFRLRAATEIDRAEKVMVAFFDANTPSHLLQQTNALGYDV-------FSVEELIESKELALQRQLKSDGWSF-----------------------WGD--------------------------AQVVLSLDFLKHVSKKEMISIEFGVDD-EAPRRNRMFFVISRSLPQGAWSPIYKSEIRTRGEADKFEPVSIPCQDFHGGDESKNFRLELHRWYKNGRTRPLGFMQTSVQKMKSLESNSSMYWWPAEDGISSAKIIVLQALTSPREARFHLLLS 382
            +L+  AVEL +   +  R E+ +  + FA +   G   G W+   ++ET+R     R + KFRL  AT +DR   + +A + A T +  + +  A G           +V  L+   EL L   L++ G  +                       WG                             + +  D ++HV     ++I FG+D  EA  RNR  FV+ R+L +G W+ +Y+SE R R EA  F P  +P     GG+  +  RLE++R+Y NG T  LGF+Q S++K++S+     +YWWPA  GI+ AK+ + +      E++F + L+
Sbjct:  128 ALRHVAVELSLTARKLPRAELLSKVDAFAVVFVGGVVEGAWDELGRTETIRDCHEPRWVAKFRLPGATALDREAPLRIAVY-AQTVTAEVGEPGADGEPPALTSAPDLAVHTLLGGVELTLATVLQAPGLCYDTPLRLPAVRGLLGLVTATGPPSWGXXXXXXATSPTGVDGSAGGGSVGGRLRGALTIDADLIRHVHPPSSVTIGFGIDGGEALARNRSQFVLCRALRRGRWAAVYRSEPRVRAEAGAFIPAVLPTDVLCGGEAGRLLRLEVYRYYLNGETALLGFVQVSMEKLRSMREGGELYWWPAVGGITRAKVRMERVQVGEAESQFGMRLT 463          
BLAST of Gcaud1586.t1 vs. uniprot
Match: A0A2V3IZC5_9FLOR (Copine-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZC5_9FLOR)

HSP 1 Score: 130 bits (327), Expect = 3.990e-31
Identity = 81/281 (28.83%), Postives = 145/281 (51.60%), Query Frame = 0
Query:  104 LKFDAVELHVEGYETTRLEIFAPAECFAALLSEGSEPGTWEVTDKSETVRCAQHIRLLKKFRLRAATEIDRAEKVMVAFFDANTPSHLLQQTNALGYDVFSVEELIESKELALQRQLKSDGWSFWGDAQVVLSLDFLKHVSKKEMISIEFGVDDEAPRRNRMFFVISRSLPQGAWSPIYKSEIRTRGEADKFEPVSIPCQDFHGGDESKNFRLELHRWYKNGRTRPLGFMQTSVQKMKSLESNSSMYWWP--AEDG---ISSAKIIVLQALTSPREARFHL 379
            L  +  ELHV      RL  F  A  FA  L   +    WE+  ++ETV   ++IR + K ++  ATE DR + + V  FD  + S  ++    +G    ++E++I   E  L++++           ++++S D ++   K   + +   +     R +R+F+V+SR L  G ++P+Y+SE+ +R E  +F+P++        G + K  RLEL+++   G    LGFMQTS+ K++S E +S + WWP  A DG   I   ++++++ + S    +F L
Sbjct:   56 LSLECRELHVP----LRLLPFRQARPFAVFLYSEAPNAPWELIGRTETVLYDEYIRFVTKLKVCCATERDRQKILRVELFDRRSKSEHIEDQTFVGAAQCTLEDIIA--EPLLRKEMALGESRVMQPGKIIVSADAIRANEKCARLILNLDMGSSTKRHHRVFYVLSRQLQSGDYTPVYRSEVLSR-EQKRFQPMTRDLTAVTAGVDDKLLRLELYQFSNRGSHIRLGFMQTSIDKLRSCERHSRLLWWPNAAGDGDNVIEVGRVVLIETVVSEEVLQFRL 329          
BLAST of Gcaud1586.t1 vs. uniprot
Match: A0A7S0ZGD5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGD5_9RHOD)

HSP 1 Score: 96.7 bits (239), Expect = 1.010e-18
Identity = 67/275 (24.36%), Postives = 133/275 (48.36%), Query Frame = 0
Query:  109 VELHVEGYETTRLEIFAPAECFAALLSEGSEPGT-WEVTDKSETVRCAQHIRLLKKFRLRAATEIDRAEKVMVAFFD-ANTPSHLLQQTNALGYDVFSVEELIESKELALQRQLKSDGWS-FWGDAQVVLSLDFLKHVSKKEMISIEFGVDDEA--PRRNRMFFVISRSLPQGAWSPIYKSEIRTRGEADKFEPVSIPCQDFHGGDESKNFRLELHRWYKNGRTRPLGFMQTSVQKMKSLESNSSMYWWPAEDGISSAKIIVLQALTSPREARFH 378
            +EL++EG       +F     FA +  +G  P   WE    +E ++   + + +  FR+  +++ +R + + V F++ A+     L + + +G     + E++ +    LQ +LK    S F G+A V +  D L  +++     I   V  EA    + + +FVISR+L +G W+P+Y SE   +G +  +EP+++  +    G + + FR+E +     G+   +G   T  + +K +++ + + +   ++G+    IIV  A   P  A F 
Sbjct:   75 LELNLEGNNLANAGLFKKKAPFAVVYLKGVAPNAEWERFGDTEAIQNVLNPKFVASFRMACSSDEEREQSLRVEFYNRAHKDKDDLSKQDFIGSATCKLGEILSAPGQTLQLELKHPSKSNFRGNATVFI--DTL--LTRDPPFEIALCVKSEALSTEKKKSYFVISRALRKGNWTPVYMSETAKQGASISWEPITLAQERLTAGADDRAFRIEFYTKSMLGQHEYIGSFSTKYESLKGMKAGNKLPFSSTKEGLIPGGIIVTAANVQPASASFE 345          
The following BLAST results are available for this feature:
BLAST of Gcaud1586.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IHX9_9FLOR1.480e-18467.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NPL0_PORUM1.650e-3528.19C2 domain-containing protein n=1 Tax=Porphyra umbi... [more]
A0A2V3IZC5_9FLOR3.990e-3128.83Copine-3 n=1 Tax=Gracilariopsis chorda TaxID=44838... [more]
A0A7S0ZGD5_9RHOD1.010e-1824.36Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..75
NoneNo IPR availablePANTHERPTHR10857:SF106COPINE-8coord: 107..347
IPR045052CopinePANTHERPTHR10857COPINEcoord: 107..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_916_length_16160_cov_3.715041contigNODE_916_length_16160_cov_3.715041:5886..7040 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1586.t1Gcaud1586.t1Gracilaria caudata M_176_S67 malemRNANODE_916_length_16160_cov_3.715041 5886..7040 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1586.t1 ID=Gcaud1586.t1|Name=Gcaud1586.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=385bp
MADTSSSDSEGEARGKDKVAQTPSTELLGDPAVDSDDGEFDEAEKAPPRL
PSAYRAKPSVIEFSPVSNQDGETFNDEEEEILDPCGLSPRGVLSKGVPAI
IESLKFDAVELHVEGYETTRLEIFAPAECFAALLSEGSEPGTWEVTDKSE
TVRCAQHIRLLKKFRLRAATEIDRAEKVMVAFFDANTPSHLLQQTNALGY
DVFSVEELIESKELALQRQLKSDGWSFWGDAQVVLSLDFLKHVSKKEMIS
IEFGVDDEAPRRNRMFFVISRSLPQGAWSPIYKSEIRTRGEADKFEPVSI
PCQDFHGGDESKNFRLELHRWYKNGRTRPLGFMQTSVQKMKSLESNSSMY
WWPAEDGISSAKIIVLQALTSPREARFHLLLSTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045052Copine