Gcaud1583.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1583.t1
Unique NameGcaud1583.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length99
Homology
BLAST of Gcaud1583.t1 vs. uniprot
Match: A0A2V3INA0_9FLOR (Photosystem I subunit O n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INA0_9FLOR)

HSP 1 Score: 184 bits (468), Expect = 2.430e-58
Identity = 86/98 (87.76%), Postives = 90/98 (91.84%), Query Frame = 0
Query:    1 MEFEISEGVEFELNPIVFALAFFGWVIPSSIPAGIPLTNGTGLSQAFFASIQENLAHWPKGPAIDDPFWLLFALWHVGMFATLIFGTIGYNLRKNPSA 98
            MEFEISEG++FELNPIV ALAFFGWV+PSSIP  IPLTNGTGLSQAFFAS+QENLA WPKGPAIDDPFWLL  LWHVGMFATLIFGTIGYNL KN SA
Sbjct:   49 MEFEISEGMDFELNPIVIALAFFGWVLPSSIPTTIPLTNGTGLSQAFFASMQENLARWPKGPAIDDPFWLLLLLWHVGMFATLIFGTIGYNLSKNRSA 146          
BLAST of Gcaud1583.t1 vs. uniprot
Match: R7Q2P0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2P0_CHOCR)

HSP 1 Score: 144 bits (363), Expect = 2.280e-42
Identity = 67/97 (69.07%), Postives = 78/97 (80.41%), Query Frame = 0
Query:    1 MEFEISEGVEFELNPIVFALAFFGWVIPSSIPAGIPLTNGTGLSQAFFASIQENLAHWPKGPAIDDPFWLLFALWHVGMFATLIFGTIGYNLRKNPS 97
            M FEISEGVEF+L+  +  LA  GWV+PSSIPAGIPLT G+GL+QAFFAS+  NLA++PKGPA DDPFW L  LWH G+FA +IFGTIGYN RK  S
Sbjct:   50 MGFEISEGVEFKLDLTILILAIVGWVVPSSIPAGIPLTEGSGLTQAFFASMNANLANFPKGPAGDDPFWTLLFLWHTGLFACMIFGTIGYNSRKVQS 146          
BLAST of Gcaud1583.t1 vs. uniprot
Match: M2XWX3_GALSU (Photosystem I subunit O n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XWX3_GALSU)

HSP 1 Score: 141 bits (355), Expect = 4.120e-41
Identity = 59/94 (62.77%), Postives = 72/94 (76.60%), Query Frame = 0
Query:    2 EFEISEGVEFELNPIVFALAFFGWVIPSSIPAGIPLTNGTGLSQAFFASIQENLAHWPKGPAIDDPFWLLFALWHVGMFATLIFGTIGYNLRKN 95
            EF+ISE   F+ NP+V  +A  GW +P+SIP+ IP+ +GTGL+QAFF SIQ NLA WPKGPA+DDPFWL   LWHVG+F  L FGTIGY + KN
Sbjct:   54 EFQISEDTPFDANPLVIIVALLGWTLPASIPSNIPILHGTGLTQAFFTSIQSNLAEWPKGPALDDPFWLYMVLWHVGLFIVLFFGTIGYGISKN 147          
BLAST of Gcaud1583.t1 vs. uniprot
Match: A0A1X6NRI2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRI2_PORUM)

HSP 1 Score: 140 bits (353), Expect = 7.350e-41
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 0
Query:    1 MEFEISEGVEFELNPIVFALAFFGWVIPSSIPAGIPLTNGTGLSQAFFASIQENLAHWPKGPAIDDPFWLLFALWHVGMFATLIFGTIGYNLRK 94
            M+FEISE   FE+NP++  LA  GW++PSS+PA I LT GTGL+QAF AS+  NLA WPKGPA DDPFW L  +WH G+FATLIFGTIG N RK
Sbjct:   46 MKFEISENTPFEINPVIIVLAMVGWIVPSSLPAPIALTGGTGLTQAFLASMNANLAAWPKGPAGDDPFWTLMFIWHAGLFATLIFGTIGVNGRK 139          
BLAST of Gcaud1583.t1 vs. uniprot
Match: A0A7S3A279_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A279_9RHOD)

HSP 1 Score: 140 bits (352), Expect = 8.430e-41
Identity = 61/97 (62.89%), Postives = 78/97 (80.41%), Query Frame = 0
Query:    1 MEFEISEGVEFELNPIVFALAFFGWVIPSSIPAGIPLTNGTGLSQAFFASIQENLAHWPKGPAIDDPFWLLFALWHVGMFATLIFGTIGYNLRKNPS 97
            M+FEIS+G +F+ N IV  L+   WV+PSSIPAGIPL NG+GL+QA++ASI +NL+ +PKGPA+DDP+W L  +WH+GMFA LIFGTIGYN  K  S
Sbjct:   41 MKFEISDGEDFDNNGIVIPLSIIAWVVPSSIPAGIPLFNGSGLTQAYWASIMDNLSRYPKGPALDDPYWTLMVMWHIGMFACLIFGTIGYNGSKRKS 137          
BLAST of Gcaud1583.t1 vs. uniprot
Match: A0A7S3A276_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A276_9RHOD)

HSP 1 Score: 137 bits (346), Expect = 2.110e-40
Identity = 60/95 (63.16%), Postives = 76/95 (80.00%), Query Frame = 0
Query:    3 FEISEGVEFELNPIVFALAFFGWVIPSSIPAGIPLTNGTGLSQAFFASIQENLAHWPKGPAIDDPFWLLFALWHVGMFATLIFGTIGYNLRKNPS 97
            FEIS+G +F+ N IV  L+   WV+PSSIPAGIPL NG+GL+QA++ASI +NL+ +PKGPA+DDP+W L  +WH+GMFA LIFGTIGYN  K  S
Sbjct:    4 FEISDGEDFDNNGIVIPLSIIAWVVPSSIPAGIPLFNGSGLTQAYWASIMDNLSRYPKGPALDDPYWTLMVMWHIGMFACLIFGTIGYNGSKRKS 98          
BLAST of Gcaud1583.t1 vs. uniprot
Match: A0A7S0MBX0_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MBX0_9CRYP)

HSP 1 Score: 117 bits (294), Expect = 1.380e-31
Identity = 53/93 (56.99%), Postives = 73/93 (78.49%), Query Frame = 0
Query:    2 EFEISEGVEFELNPIVFALAFFGWVIPSS-IPAGIPL--TNGTGLSQAFFASIQENLAHWPKGPAIDDPFWLLFALWHVGMFATLIFGTIGYN 91
            +FEIS+GV++ELNP V A +F+GWV+P++ IP+ IPL  + G GL+QA +  I E+LA +P  PAI DPFW++  +WH G+FAT+IFGTIGYN
Sbjct:   69 DFEISDGVKYELNPFVLAASFYGWVLPTALIPSNIPLYGSKGVGLTQALYNEITEHLATFPTPPAISDPFWVILFIWHSGLFATMIFGTIGYN 161          
BLAST of Gcaud1583.t1 vs. uniprot
Match: A0A7S1HK96_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HK96_HEMAN)

HSP 1 Score: 116 bits (290), Expect = 4.440e-31
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 0
Query:    2 EFEISEGVEFELNPIVFALAFFGWVIPSSIPAGIPLTNGTGLSQAFFASIQENLAHWPKGPAIDDPFWLLFALWHVGMFATLIFGTIGYN 91
            +FEISEG EF+LNPIV  LA  GW +P  +P+ IPL  G GL+ A FA I E+L  +P  PA+ DPFW++  +WH G+FAT+IF TIGYN
Sbjct:   63 KFEISEGQEFDLNPIVLVLAMLGWAVPGLLPSQIPLYGGKGLTTALFAEIGEHLQTFPVPPAMSDPFWVILFIWHSGLFATMIFATIGYN 152          
BLAST of Gcaud1583.t1 vs. uniprot
Match: A0A7J7IMB0_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMB0_9RHOD)

HSP 1 Score: 110 bits (276), Expect = 4.820e-29
Identity = 48/88 (54.55%), Postives = 63/88 (71.59%), Query Frame = 0
Query:    3 FEISEGVEFELNPIVFALAFFGWVIPSSIPAGIPLTNGTGLSQAFFASIQENLAHWPKGPAIDDPFWLLFALWHVGMFATLIFGTIGY 90
            FEIS+G ++ LNP V  +A  GW   +++P+ IP+  GTGL+QAF ASIQ  LA +P GP +DDPFW    ++HVG+FA LIFG IGY
Sbjct:   56 FEISDGEQYPLNPAVILIAIIGWSAAAAVPSNIPVLGGTGLTQAFLASIQRLLAQYPTGPKLDDPFWFYLVVYHVGLFALLIFGQIGY 143          
BLAST of Gcaud1583.t1 vs. uniprot
Match: M1VFJ4_CYAM1 (Uncharacterized protein n=4 Tax=cellular organisms TaxID=131567 RepID=M1VFJ4_CYAM1)

HSP 1 Score: 108 bits (270), Expect = 3.910e-28
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    3 FEISEGVEFELNPIVFALAFFGWVIPSSIPAGIPLTNGTGLSQAFFASIQENLAHWPKGPAIDDPFWLLFALWHVGMFATLIFGTIGY 90
            FE+S+G  + LNP V  +A  GW   ++IP+ IP+  GTGL+QAF ASIQ  LA +P GP +DDPFW    ++HVG+FA LIFG IGY
Sbjct:   56 FEVSDGEPYPLNPAVIFIALIGWSAVAAIPSNIPVLGGTGLTQAFLASIQRLLAQYPTGPKLDDPFWFYLIVYHVGLFALLIFGQIGY 143          
The following BLAST results are available for this feature:
BLAST of Gcaud1583.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A2V3INA0_9FLOR2.430e-5887.76Photosystem I subunit O n=1 Tax=Gracilariopsis cho... [more]
R7Q2P0_CHOCR2.280e-4269.07Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2XWX3_GALSU4.120e-4162.77Photosystem I subunit O n=1 Tax=Galdieria sulphura... [more]
A0A1X6NRI2_PORUM7.350e-4165.96Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S3A279_9RHOD8.430e-4162.89Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A276_9RHOD2.110e-4063.16Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0MBX0_9CRYP1.380e-3156.99Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S1HK96_HEMAN4.440e-3156.67Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7J7IMB0_9RHOD4.820e-2954.55Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1VFJ4_CYAM13.910e-2854.55Uncharacterized protein n=4 Tax=cellular organisms... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017498Photosystem I PsaOPANTHERPTHR36311PHOTOSYSTEM I SUBUNIT Ocoord: 16..95
NoneNo IPR availablePANTHERPTHR36311:SF1PHOTOSYSTEM I SUBUNIT Ocoord: 16..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 93..98
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_993_length_15395_cov_3.930345contigNODE_993_length_15395_cov_3.930345:8897..9193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1583.t1Gcaud1583.t1Gracilaria caudata M_176_S67 malemRNANODE_993_length_15395_cov_3.930345 8897..9193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1583.t1 ID=Gcaud1583.t1|Name=Gcaud1583.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=99bp
MEFEISEGVEFELNPIVFALAFFGWVIPSSIPAGIPLTNGTGLSQAFFAS
IQENLAHWPKGPAIDDPFWLLFALWHVGMFATLIFGTIGYNLRKNPSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017498PSI_PsaO