Gcaud1578.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1578.t1
Unique NameGcaud1578.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length81
Homology
BLAST of Gcaud1578.t1 vs. uniprot
Match: A0A2V3ILI1_9FLOR (Diphthamide biosynthesis protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILI1_9FLOR)

HSP 1 Score: 120 bits (301), Expect = 4.870e-34
Identity = 55/82 (67.07%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 MTLYDEVDLEDMSWDDSLHAFVYQCPCGDVFQITRAELRAGEEIARCPSCTLVVRVVYDLDEVSDD--ERDELRVRCVPERH 80
            M +YD+VDLEDM WD +L A+VYQCPCGDVFQIT AEL AG+EIARCPSCTLV+RV+YD D++  D  E    R+RCV E+H
Sbjct:    1 MPVYDDVDLEDMQWDATLLAYVYQCPCGDVFQITPAELAAGDEIARCPSCTLVIRVIYDPDDLPSDASELSLARIRCVAEQH 82          
BLAST of Gcaud1578.t1 vs. uniprot
Match: A0A5J4YJD4_PORPP (DPH3-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJD4_PORPP)

HSP 1 Score: 105 bits (263), Expect = 1.370e-27
Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    2 TLYDEVDLEDMSWDDSLHAFVYQCPCGDVFQITRAELRAGEEIARCPSCTLVVRVVYDLDEVSDDERDE 70
            T+YDEV++EDM WDD+L+AF Y CPCGDVF+IT+ ELRAGEEI  CPSC+L +RV+YD DE      D+
Sbjct:   60 TVYDEVEIEDMEWDDALNAFTYPCPCGDVFRITKDELRAGEEIGTCPSCSLTIRVIYDQDEFEQVSPDK 128          
BLAST of Gcaud1578.t1 vs. uniprot
Match: A0A8B9AN69_PHODC (diphthamide biosynthesis protein 3-like n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AN69_PHODC)

HSP 1 Score: 102 bits (255), Expect = 4.730e-27
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    1 MTLYDEVDLEDMSWDDSLHAFVYQCPCGDVFQITRAELRAGEEIARCPSCTLVVRVVYDLDEVSDDERDE 70
            M  YDEV++EDM W+D L  F Y CPCGD+FQITR +LRAGEEIARCPSC+L + V+Y+ ++  D ER +
Sbjct:    1 MAAYDEVEIEDMEWNDELQVFTYPCPCGDLFQITREDLRAGEEIARCPSCSLFITVIYNPEDFPDPERKQ 70          
BLAST of Gcaud1578.t1 vs. uniprot
Match: C1EHZ8_MICCC (DPH-type MB domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EHZ8_MICCC)

HSP 1 Score: 101 bits (251), Expect = 1.980e-26
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    4 YDEVDLEDMSWDDSLHAFVYQCPCGDVFQITRAELRAGEEIARCPSCTLVVRVVYDLDEVSD 65
            YDE+DLEDM W+  L AF YQCPCGD+FQIT  ELRAGEE+  CPSC+LV+ VVYD DE+ +
Sbjct:    5 YDEIDLEDMDWNSELGAFTYQCPCGDLFQITPEELRAGEEVGHCPSCSLVITVVYDPDELKE 66          
BLAST of Gcaud1578.t1 vs. uniprot
Match: A0A383VPL6_TETOB (DPH-type MB domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VPL6_TETOB)

HSP 1 Score: 100 bits (249), Expect = 3.780e-26
Identity = 41/64 (64.06%), Postives = 51/64 (79.69%), Query Frame = 0
Query:    4 YDEVDLEDMSWDDSLHAFVYQCPCGDVFQITRAELRAGEEIARCPSCTLVVRVVYDLDEVSDDE 67
            YDEV++EDM WD+ L A+ Y CPCGDVFQIT  +L+AGEEIARCPSC+L + V+YD D+  D E
Sbjct:    3 YDEVEIEDMKWDEQLQAYTYSCPCGDVFQITLEQLKAGEEIARCPSCSLYITVIYDQDDFLDAE 66          
BLAST of Gcaud1578.t1 vs. uniprot
Match: A0A2J7ZNU5_9CHLO (Diphthamide biosynthesis protein 3 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZNU5_9CHLO)

HSP 1 Score: 100 bits (249), Expect = 4.110e-26
Identity = 41/63 (65.08%), Postives = 52/63 (82.54%), Query Frame = 0
Query:    4 YDEVDLEDMSWDDSLHAFVYQCPCGDVFQITRAELRAGEEIARCPSCTLVVRVVYDLDEVSDD 66
            YDEV++EDM WD+ L A+ Y CPCGD+FQIT  ELR+GEEIARCPSC+L + VVYD ++ SD+
Sbjct:    3 YDEVEIEDMKWDEKLQAYTYTCPCGDLFQITLEELRSGEEIARCPSCSLYITVVYDPEDFSDE 65          
BLAST of Gcaud1578.t1 vs. uniprot
Match: A0A1X6NQP1_PORUM (DPH-type MB domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQP1_PORUM)

HSP 1 Score: 99.8 bits (247), Expect = 8.060e-26
Identity = 39/66 (59.09%), Postives = 56/66 (84.85%), Query Frame = 0
Query:    1 MTLYDEVDLEDMSWDDSLHAFVYQCPCGDVFQITRAELRAGEEIARCPSCTLVVRVVYDLDEVSDD 66
            MT+YDEV++EDM W+  L+AF + CPCGD+F++T AE+RAGEEIA CPSCTL++RV+YD  ++ ++
Sbjct:    1 MTVYDEVEIEDMEWNVELNAFTWSCPCGDIFRLTVAEMRAGEEIATCPSCTLILRVIYDDGDIPEE 66          
BLAST of Gcaud1578.t1 vs. uniprot
Match: A0A7I8LEL2_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8LEL2_SPIIN)

HSP 1 Score: 99.8 bits (247), Expect = 8.290e-26
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 0
Query:    4 YDEVDLEDMSWDDSLHAFVYQCPCGDVFQITRAELRAGEEIARCPSCTLVVRVVYDLDEVSDDERDE 70
            YD+V++EDM W++ L AF Y CPCGD+FQITR ELRAGEEIARCPSC+L + V+Y+ ++ +D    E
Sbjct:    3 YDDVEIEDMEWNEELQAFTYACPCGDIFQITREELRAGEEIARCPSCSLYITVIYNQEDFADAPEKE 69          
BLAST of Gcaud1578.t1 vs. uniprot
Match: UPI001E4363F1 (hypothetical protein n=1 Tax=Streptomyces fildesensis TaxID=375757 RepID=UPI001E4363F1)

HSP 1 Score: 100 bits (248), Expect = 9.990e-26
Identity = 39/67 (58.21%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    4 YDEVDLEDMSWDDSLHAFVYQCPCGDVFQITRAELRAGEEIARCPSCTLVVRVVYDLDEVSDDERDE 70
            YDEV++EDM W   L AF Y CPCGD+FQIT+ +LR GE+IARCPSC+L + V+YDL++++ D+ D+
Sbjct:   22 YDEVEIEDMEWSRELQAFTYPCPCGDLFQITKDDLRRGEDIARCPSCSLYITVIYDLNDLAGDDHDQ 88          
BLAST of Gcaud1578.t1 vs. uniprot
Match: A0A6I9QR62_ELAGV (diphthamide biosynthesis protein 3 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9QR62_ELAGV)

HSP 1 Score: 99.4 bits (246), Expect = 1.080e-25
Identity = 39/70 (55.71%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    1 MTLYDEVDLEDMSWDDSLHAFVYQCPCGDVFQITRAELRAGEEIARCPSCTLVVRVVYDLDEVSDDERDE 70
            M+ YDEV++EDM W++ L AF Y CPCGD+FQITR +LR GEEIARCPSC+L + V+Y+ ++ +D ++ +
Sbjct:    1 MSAYDEVEIEDMEWNEELQAFTYPCPCGDLFQITREDLRFGEEIARCPSCSLFITVIYNPEDFADPKKSQ 70          
The following BLAST results are available for this feature:
BLAST of Gcaud1578.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILI1_9FLOR4.870e-3467.07Diphthamide biosynthesis protein 3 n=1 Tax=Gracila... [more]
A0A5J4YJD4_PORPP1.370e-2763.77DPH3-like n=1 Tax=Porphyridium purpureum TaxID=356... [more]
A0A8B9AN69_PHODC4.730e-2760.00diphthamide biosynthesis protein 3-like n=2 Tax=Ph... [more]
C1EHZ8_MICCC1.980e-2667.74DPH-type MB domain-containing protein n=1 Tax=Micr... [more]
A0A383VPL6_TETOB3.780e-2664.06DPH-type MB domain-containing protein n=1 Tax=Tetr... [more]
A0A2J7ZNU5_9CHLO4.110e-2665.08Diphthamide biosynthesis protein 3 n=1 Tax=Tetraba... [more]
A0A1X6NQP1_PORUM8.060e-2659.09DPH-type MB domain-containing protein n=1 Tax=Porp... [more]
A0A7I8LEL2_SPIIN8.290e-2659.70Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
UPI001E4363F19.990e-2658.21hypothetical protein n=1 Tax=Streptomyces fildesen... [more]
A0A6I9QR62_ELAGV1.080e-2555.71diphthamide biosynthesis protein 3 n=1 Tax=Elaeis ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036671DPH-type metal-binding domain superfamilyGENE3D3.10.660.10DPH Zinc fingercoord: 1..76
e-value: 2.5E-25
score: 89.8
IPR036671DPH-type metal-binding domain superfamilySUPERFAMILY144217CSL zinc fingercoord: 1..69
IPR007872DPH-type metal-binding domainPFAMPF05207zf-CSLcoord: 5..59
e-value: 2.5E-19
score: 68.8
IPR007872DPH-type metal-binding domainPROSITEPS51074DPH_MBcoord: 3..59
score: 21.341387
IPR044248Diphthamide biosynthesis protein 3/4-likePANTHERPTHR21454DPH3 HOMOLOG-RELATEDcoord: 1..70
NoneNo IPR availablePANTHERPTHR21454:SF2DPH3 HOMOLOGcoord: 1..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2866_length_4534_cov_3.293495contigNODE_2866_length_4534_cov_3.293495:3125..3464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1578.t1Gcaud1578.t1Gracilaria caudata M_176_S67 malemRNANODE_2866_length_4534_cov_3.293495 3125..3464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1578.t1 ID=Gcaud1578.t1|Name=Gcaud1578.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=81bp
MTLYDEVDLEDMSWDDSLHAFVYQCPCGDVFQITRAELRAGEEIARCPSC
TLVVRVVYDLDEVSDDERDELRVRCVPERH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036671DHP_MB_sf
IPR007872DHP_MB_dom
IPR044248DPH3/4-like