Gcaud1575.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1575.t1
Unique NameGcaud1575.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length344
Homology
BLAST of Gcaud1575.t1 vs. uniprot
Match: A0A2V3IEL2_9FLOR (15-cis-zeta-carotene isomerase, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEL2_9FLOR)

HSP 1 Score: 462 bits (1190), Expect = 5.150e-161
Identity = 229/342 (66.96%), Postives = 271/342 (79.24%), Query Frame = 0
Query:   10 AFVPSTYTLVQEQGLKKCLWVGRSKHTCR---------KLKNFAEPKFGRAWTSSRSLREKSSECNPPSLPSSSVNALRFGILGWVSALALPTVLAYLDANAAQGAVTDYLGNYASHYYMVLYNGLFALLHSGLASLRPFLTRFTGERLYRVGFALASLPSAIGLIAYFIAHRYDGKVLWTLQGAPFVHNLCYLITFISFLFLYPATFNLLEVAAVQKPSFRIYETGIVRISRHPQLAGQVLWCFAHGAWMGTSFTLVACLTLIAQHLVGAWNGDRRLRDKYGEEWIRYAERTSIVPFASVIDGKQRLRLKEFGVGYVGVVLFVLGTYAAHPWMLRVVGDLR 342
            AF+ S+Y+ V    L+    V R ++ C          KL   + P   +   S +     +SE    SLP SS+ +LR G+L W+SAL +PT LAYLDA    G++ ++LG Y+SHY+MV+YN LFALLHSGLASLRP+LT+FTGERLYRVGFALASLPSA+ LI +FIAHRYDG+ LW LQG P++H LCY+ITF+SFLFLYPATFNLLEVAAV+KPSFRIYETGI+RI+RHPQL GQVLWC AHGAWMGTSFTLVACLTLIAQHLVGAWNGDRRLRD+YG+EW RY+ERTSI+PFAS+IDGKQ LRL EFG GY GVV FV+GTY AHPWMLRVVG+L+
Sbjct:   10 AFISSSYS-VSRNPLRD---VARRQYLCGTSTTKGERGKLGQLSRPAVAKIRLSIKRSVRGASESQKSSLPQSSITSLRLGVLTWLSALLVPTALAYLDATTTHGSLNEHLGRYSSHYFMVVYNALFALLHSGLASLRPWLTKFTGERLYRVGFALASLPSAVALIGFFIAHRYDGRQLWLLQGVPYMHELCYVITFVSFLFLYPATFNLLEVAAVKKPSFRIYETGIIRITRHPQLTGQVLWCLAHGAWMGTSFTLVACLTLIAQHLVGAWNGDRRLRDRYGQEWTRYSERTSILPFASIIDGKQELRLNEFGFGYFGVVAFVVGTYVAHPWMLRVVGELQ 347          
BLAST of Gcaud1575.t1 vs. uniprot
Match: R7QLM5_CHOCR (NnrU domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLM5_CHOCR)

HSP 1 Score: 331 bits (849), Expect = 2.570e-109
Identity = 172/258 (66.67%), Postives = 195/258 (75.58%), Query Frame = 0
Query:   91 LPTVLAYLDANAAQGAVTDYLGNYASHY----YMVLYNGLFALLHSGLASLRPFLTRFTGERLYRVGFALASLPSAIGLIAYFIAHRYDGKVLWTLQGAPFVHNLCYLITFISFLFLYPATFNLLEVAAVQKPSFRIYETGIVRISRHPQLAGQVLWCFAHGAWMGTSFTLVACLTLIAQHLVGAWNGDRRLRDKYGEEWIRYAERTSIVPFASVIDGKQRLRLKEF-GVGYVGVVLFVLGTYAAHPWMLRVVGDLRL 343
            +P +L   DA A      D+L +  SHY     ++L+  LFALLHSGLASLRP LT   GERLYRVGFAL SLPSA  LIAYFIAHRYDG  LW +Q  P +H+  Y+ TF+SFL LYPATFNLLEVAAVQKP+ RIYETG+ RI+RHPQL GQ+LWC AH AWMGTSFTLVA L L+A H  GAWNGDRRLRD++GEEWI +A+RTSIVPFA+V+ GKQ L   EF    YVGVV FVL TYAAHP MLR VGDL L
Sbjct:   93 VPPLLTLRDAPA------DFLPHLLSHYPSXLLIILFTALFALLHSGLASLRPSLTPVLGERLYRVGFALVSLPSATALIAYFIAHRYDGAQLWRVQNLPGLHDAVYIATFVSFLLLYPATFNLLEVAAVQKPTLRIYETGVTRITRHPQLWGQILWCVAHTAWMGTSFTLVASLCLVAHHSFGAWNGDRRLRDRFGEEWIAFAQRTSIVPFAAVVSGKQNLAWGEFFRPAYVGVVAFVLATYAAHPLMLRAVGDLHL 344          
BLAST of Gcaud1575.t1 vs. uniprot
Match: A0A7S0T8X8_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T8X8_9RHOD)

HSP 1 Score: 319 bits (817), Expect = 2.830e-104
Identity = 161/257 (62.65%), Postives = 189/257 (73.54%), Query Frame = 0
Query:   91 LPTVLAYLDANAAQGAVTDYL---GNYASHYYMVLYNGLFALLHSGLASLRPFLTRFTGERLYRVGFALASLPSAIGLIAYFIAHRYDGKVLWTLQGAPFVHNLCYLITFISFLFLYPATFNLLEVAAVQKPSFRIYETGIVRISRHPQLAGQVLWCFAHGAWMGTSFTLVACLTLIAQHLVGAWNGDRRLRDKYGEEWIRYAERTSIVPFASVIDGKQRLRLKEF-GVGYVGVVLFVLGTYAAHPWMLRVVGDLRL 343
            LP  LA+ D++      T        YA+H YM+L    FAL+HSGLASLRP + +  GER YR+GFALASLP A+G IAYFIAHRYDG  LWTLQG   VH   Y+ TF+SF  LYPATFNLLEVAAV++P FRIYE G++RI+RHPQL GQVLWC AH AW GTS  +VA   L+A H VGAWNGDRRLRD+YG EW +YA RTS+VPF +++DG+Q+L  KEF    YVGV  FVL TYAAHP MLRVVG+L L
Sbjct:  102 LPVALAFADSSNPHAQATFQTLVTTKYATHVYMMLMLNGFALVHSGLASLRPKIAQIIGERAYRLGFALASLPLAVGTIAYFIAHRYDGAQLWTLQGIAGVHEFVYITTFLSFFLLYPATFNLLEVAAVRRPGFRIYEDGVMRITRHPQLWGQVLWCVAHSAWTGTSLPIVASAGLLAHHFVGAWNGDRRLRDRYGLEWEKYASRTSLVPFVAILDGRQKLNPKEFIRPAYVGVTAFVLATYAAHPLMLRVVGNLHL 358          
BLAST of Gcaud1575.t1 vs. uniprot
Match: A0A5J4YI73_PORPP (15-cis-zeta-carotene isomerase, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YI73_PORPP)

HSP 1 Score: 288 bits (738), Expect = 3.030e-92
Identity = 145/258 (56.20%), Postives = 192/258 (74.42%), Query Frame = 0
Query:   91 LPTVLAYLDANAA--QGAVTDYL--GNYASHYYMVLYNGLFALLHSGLASLRPFLTRFTGERLYRVGFALASLPSAIGLIAYFIAHRYDGKVLWTLQGAPFVHNLCYLITFISFLFLYPATFNLLEVAAVQKPSFRIYETGIVRISRHPQLAGQVLWCFAHGAWMGTSFTLVACLTLIAQHLVGAWNGDRRLRDKYGEEWIRYAERTSIVPFASVIDGKQRLRLKEF-GVGYVGVVLFVLGTYAAHPWMLRVVGDLRL 343
            +P + A  DA+A+   G    +L    Y++H+ M+L    FA++HSGLA+LRP + +  GER+YRV FAL SLP+A  +IA++IAHRYDG  LWT+QG P VH+  Y++TF+SFLFLYPATFNLLEVAAVQKP FRIYETGI RI+RHPQL GQ++WC AH AW GT+  LVA   L+A H +GAW+GD RL++ Y + W +YA RTS++PFA+V+ G Q ++ +EF    Y+GV+ F LG YAAHP MLR++G+L L
Sbjct:  108 IPLLAAIADASASGQDGNTLMHLLQTKYSTHFAMMLLLNGFAVIHSGLAALRPRVAQLVGERIYRVIFALCSLPAAGYVIAFYIAHRYDGMQLWTIQGVPGVHDAVYVLTFVSFLFLYPATFNLLEVAAVQKPGFRIYETGITRITRHPQLWGQLMWCVAHCAWTGTTLPLVASAGLLAHHFLGAWHGDVRLQNTYKQAWEQYAVRTSLLPFAAVVRGDQTIQWREFVRPAYIGVIAFTLGAYAAHPAMLRLIGELHL 365          
BLAST of Gcaud1575.t1 vs. uniprot
Match: A0A7S1TGU6_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TGU6_9RHOD)

HSP 1 Score: 271 bits (693), Expect = 4.360e-86
Identity = 140/260 (53.85%), Postives = 184/260 (70.77%), Query Frame = 0
Query:   82 ILGWVSALALPTVLAYLDANAAQGAVTDYLG-NYASHYYMVLYNGLFALLHSGLASLRPFLTRFTGERLYRVGFALASLPSAIGLIAYFIAHRYDGKVLWTLQGAPFVHNLCYLITFISFLFLYPATFNLLEVAAVQKPSFRIYETGIVRISRHPQLAGQVLWCFAHGAWMGTSFTLVACLTLIAQHLVGAWNGDRRLRDKYGEEWIRYAERTSIVPFASVIDGKQRLR-LKEFGVGYVGVVLFVLGTYAAHPWMLRVVG 339
            + GW+    +P V  YL    ++    D LG ++ SH+ M+     F +LHSGLASLRP++    GER +R+ FAL SLPSA+G IAYFI HRYDG  LW L   P +H+L  + T ISFL LYPATFNLLEVAA++KP+FRIYE GI+RI+RHPQL GQVLWC  H  W+G++ TL A L LI+ H  GAWNGDRRLRD+YGEEW ++A RTS++PF ++++G+Q+L  L+ F   Y+GV+ FV   Y +HP +L +VG
Sbjct:   59 VAGWM----VPVVAHYLRWGGSEA--WDVLGTDFESHFVMMAATTGFGVLHSGLASLRPWVAPRIGERGFRILFALFSLPSAVGTIAYFITHRYDGMTLWQLHTVPGMHDLIVIGTTISFLLLYPATFNLLEVAAIKKPTFRIYEEGIMRITRHPQLWGQVLWCITHTLWIGSTLTLTASLGLISHHFFGAWNGDRRLRDRYGEEWEKFASRTSLIPFQAILEGRQKLEPLEFFRPAYLGVLGFVYLAYISHPAILGLVG 312          
BLAST of Gcaud1575.t1 vs. uniprot
Match: A0A5B8NQ04_9CHRO (NnrU domain-containing protein n=1 Tax=Euhalothece natronophila Z-M001 TaxID=522448 RepID=A0A5B8NQ04_9CHRO)

HSP 1 Score: 263 bits (671), Expect = 6.340e-84
Identity = 125/229 (54.59%), Postives = 165/229 (72.05%), Query Frame = 0
Query:  115 ASHYYMVLYNGLFALLHSGLASLRPFLTRFTGERLYRVGFALASLPSAIGLIAYFIAHRYDGKVLWTLQGAPFVHNLCYLITFISFLFLYPATFNLLEVAAVQKPSFRIYETGIVRISRHPQLAGQVLWCFAHGAWMGTSFTLVACLTLIAQHLVGAWNGDRRLRDKYGEEWIRYAERTSIVPFASVIDGKQRLRLKEF-GVGYVGVVLFVLGTYAAHPWMLRVVGDLR 342
            +SH+ M+     FA+ HSGLA+LRP+  +  G RLYRVGFAL S+P A+ LI YF  HRYDG  LW +QG P V  L + ++ ISFLFLYPATFNLLE+AA+QKP   +YETGI+RI+RHPQ+ GQ++WC AH  W+GTSFTLV  L LIA HL G W+GDRRL ++YG  ++   ERTS++PF +++ G+Q L+L+EF    Y+GV LF  G + AHPW++ V   + 
Sbjct:    8 SSHWVMLGLLLGFAVAHSGLAALRPWAEKLIGARLYRVGFALISIPLAVILIVYFFNHRYDGLQLWQVQGQPGVFYLVWTLSAISFLFLYPATFNLLEIAAIQKPQVHLYETGIIRITRHPQMVGQIIWCIAHTLWLGTSFTLVTSLGLIAHHLFGVWHGDRRLTNRYGNAFLEAKERTSVIPFLAILQGRQTLKLQEFLRPAYLGVALFTYGLWKAHPWLMEVTAKVN 236          
BLAST of Gcaud1575.t1 vs. uniprot
Match: A0A2T2RB85_9CYAN (NnrU domain-containing protein n=1 Tax=Cyanobacteria bacterium SW_9_44_58 TaxID=1919144 RepID=A0A2T2RB85_9CYAN)

HSP 1 Score: 258 bits (659), Expect = 4.420e-82
Identity = 123/229 (53.71%), Postives = 166/229 (72.49%), Query Frame = 0
Query:  116 SHYYMVLYNGLFALLHSGLASLRPFLTRFTGERLYRVGFALASLPSAIGLIAYFIAHRYDGKVLWTLQGAPFVHNLCYLITFISFLFLYPATFNLLEVAAVQKPSFRIYETGIVRISRHPQLAGQVLWCFAHGAWMGTSFTLVACLTLIAQHLVGAWNGDRRLRDKYGEEWIRYAERTSIVPFASVIDGKQRLRLKEF-GVGYVGVVLFVLGTYAAHPWMLRVVGDLRL 343
            SH  M+     FA+ HSGLA+LRP+  +  G RLYRVGFAL SLP A+ L+ YF  HRYDG +LW +Q  P +  L +L++ ISFLFLYPATFNLLE+AA++KP   +YETGI+RI+RHPQ+ GQV+WC AH  W+G+SF+LV  L LIA HL G W+GDRRL+ +YGE +I+  ERTS++PF ++I G+Q L+ +EF    Y+GV +F    + AHPW++++   L L
Sbjct:   10 SHGIMLALLAGFAVAHSGLAALRPWGEQLLGARLYRVGFALVSLPLAVILVVYFFNHRYDGIILWQVQTQPGIFELVWLLSAISFLFLYPATFNLLEIAAIEKPQLHLYETGIIRITRHPQMVGQVIWCIAHTLWIGSSFSLVTSLGLIAHHLFGVWHGDRRLQSRYGETFIQAKERTSVIPFLAIIQGRQTLKWREFLRPAYLGVAIFTYLLWRAHPWLIQMSAQLNL 238          
BLAST of Gcaud1575.t1 vs. uniprot
Match: M2WX76_GALSU (Sodium symporter-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WX76_GALSU)

HSP 1 Score: 262 bits (669), Expect = 5.050e-82
Identity = 122/256 (47.66%), Postives = 174/256 (67.97%), Query Frame = 0
Query:   87 SALALPTVLAYLDANAAQGA-VTDYLGNYASHYYMVLYNGLFALLHSGLASLRPFLTRFTGERLYRVGFALASLPSAIGLIAYFIAHRYDGKVLWTLQGAPFVHNLCYLITFISFLFLYPATFNLLEVAAVQKPSFRIYETGIVRISRHPQLAGQVLWCFAHGAWMGTSFTLVACLTLIAQHLVGAWNGDRRLRDKYGEEWIRYAERTSIVPFASVIDGKQRLRLKEF-GVGYVGVVLFVLGTYAAHPWMLRVVGD 340
            SA   P V  Y D+N +  +     L  Y SHY ++    LF+ +HSGLASLRP +T+  GERLYR+GFA++SLP A+ +I YF+ HRYDG +LW ++  P +H L +L++FISF FLYP TF LLE+AA+QKP   ++  GI+RI+RHPQL GQ+LWC  H  W+G+SF++V  L L++ H  GAW+GD+RL+ KYGEEW    E+T+++PF +V  GKQ+L + EF    Y+ + +F    Y  HP ++++ G 
Sbjct:   95 SACLFPVVCVYFDSNTSFNSNFQTLLDKYTSHYTIIGLQVLFSTVHSGLASLRPSVTKLLGERLYRIGFAVSSLPLAVVMIGYFVTHRYDGIILWQIRNIPGIHELVWLLSFISFYFLYPGTFRLLEIAAIQKPELHLFGEGIMRITRHPQLWGQILWCIGHMLWLGSSFSVVTSLCLVSYHFFGAWHGDQRLKSKYGEEWTELEEQTNVLPFVAVFSGKQKLVVSEFLHPAYLVITVFTFCLYVLHPNIIQLFGH 350          
BLAST of Gcaud1575.t1 vs. uniprot
Match: UPI001B0626BC (Uncharacterized protein n=1 Tax=Cyanobacteria bacterium SBC TaxID=2821503 RepID=UPI001B0626BC)

HSP 1 Score: 254 bits (648), Expect = 1.280e-80
Identity = 122/217 (56.22%), Postives = 161/217 (74.19%), Query Frame = 0
Query:  126 LFALLHSGLASLRPFLTRFTGERLYRVGFALASLPSAIGLIAYFIAHRYDGKVLWTLQGAPFVHNLCYLITFISFLFLYPATFNLLEVAAVQKPSFRIYETGIVRISRHPQLAGQVLWCFAHGAWMGTSFTLVACLTLIAQHLVGAWNGDRRLRDKYGEEWIRYAERTSIVPFASVIDGKQRLRLKEF-GVGYVGVVLFVLGTYAAHPWMLRVVGDL 341
            +FAL+HSGLA+LRP+     G R YRV FA+AS+P A+GL+AYF+AHRYDG  LW +QG   +  L + ++F+SFLFLYPATFNL E+AA+ KP   +YETGI+RI RHPQ+ GQV+WC AH  W+GTSFTLV  L LIA HL   W+GDRRL  ++G+ +     RTSIVPF +++ G+Q L  +EF    Y+GVV+FVLG + AHPW++RV G++
Sbjct:    7 VFALVHSGLAALRPWGESKIGARPYRVLFAVASIPLAVGLVAYFVAHRYDGMQLWMVQGISGIEPLVWGLSFVSFLFLYPATFNLGEIAAIAKPEVHLYETGIIRICRHPQMVGQVIWCIAHTLWIGTSFTLVTSLGLIAHHLFAVWHGDRRLAARFGKSFETLRSRTSIVPFLAIVRGQQTLNWQEFVRPAYLGVVIFVLGFWFAHPWLIRVTGNI 223          
BLAST of Gcaud1575.t1 vs. uniprot
Match: K9YEQ7_HALP7 (NnrU domain-containing protein n=1 Tax=Halothece sp. (strain PCC 7418) TaxID=65093 RepID=K9YEQ7_HALP7)

HSP 1 Score: 254 bits (648), Expect = 1.960e-80
Identity = 118/217 (54.38%), Postives = 156/217 (71.89%), Query Frame = 0
Query:  127 FALLHSGLASLRPFLTRFTGERLYRVGFALASLPSAIGLIAYFIAHRYDGKVLWTLQGAPFVHNLCYLITFISFLFLYPATFNLLEVAAVQKPSFRIYETGIVRISRHPQLAGQVLWCFAHGAWMGTSFTLVACLTLIAQHLVGAWNGDRRLRDKYGEEWIRYAERTSIVPFASVIDGKQRLRLKEF-GVGYVGVVLFVLGTYAAHPWMLRVVGDLR 342
            FA+ HSGLA+LRP+  +  G RLYRVGFAL SLP A+ LI YF  HRYDG  LW +QG P +    ++++ ISFLFLYPATFNLLE+AA+ KP   +YETGI+RI+RHPQ+ GQV+WC AH  W+GTSFTL+  L LIA HL   W+GDRRL  +YG  +    +RTS++PF +++ G+Q L+L+EF    Y+GV LF  G + AHPW+++V   + 
Sbjct:   21 FAIAHSGLAALRPWGEKIIGARLYRVGFALVSLPLAVILIVYFFNHRYDGLQLWQVQGQPGIFTTVWVLSAISFLFLYPATFNLLEIAAIDKPQVHLYETGIIRITRHPQMVGQVIWCIAHTLWIGTSFTLLTSLGLIAHHLFAVWHGDRRLASRYGTAFTEAKQRTSVIPFLAILQGRQTLKLQEFLRPAYLGVALFTYGLWLAHPWLMQVTAKVN 237          
The following BLAST results are available for this feature:
BLAST of Gcaud1575.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IEL2_9FLOR5.150e-16166.9615-cis-zeta-carotene isomerase, chloroplastic n=1 ... [more]
R7QLM5_CHOCR2.570e-10966.67NnrU domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A7S0T8X8_9RHOD2.830e-10462.65Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4YI73_PORPP3.030e-9256.2015-cis-zeta-carotene isomerase, chloroplastic n=1 ... [more]
A0A7S1TGU6_9RHOD4.360e-8653.85Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5B8NQ04_9CHRO6.340e-8454.59NnrU domain-containing protein n=1 Tax=Euhalothece... [more]
A0A2T2RB85_9CYAN4.420e-8253.71NnrU domain-containing protein n=1 Tax=Cyanobacter... [more]
M2WX76_GALSU5.050e-8247.66Sodium symporter-like protein n=1 Tax=Galdieria su... [more]
UPI001B0626BC1.280e-8056.22Uncharacterized protein n=1 Tax=Cyanobacteria bact... [more]
K9YEQ7_HALP71.960e-8054.38NnrU domain-containing protein n=1 Tax=Halothece s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009915NnrU domainPFAMPF07298NnrUcoord: 120..337
e-value: 2.4E-47
score: 161.2
NoneNo IPR availableGENE3D1.20.120.1630coord: 115..298
e-value: 4.0E-13
score: 51.5
NoneNo IPR availablePANTHERPTHR3598815-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTICcoord: 119..335
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 138..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 315..334
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 212..314
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..211
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..137
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 335..343
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 172..190
NoneNo IPR availableTMHMMTMhelixcoord: 149..171
NoneNo IPR availableTMHMMTMhelixcoord: 313..335
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 78..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2784_length_4698_cov_5.123508contigNODE_2784_length_4698_cov_5.123508:1510..2541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1575.t1Gcaud1575.t1Gracilaria caudata M_176_S67 malemRNANODE_2784_length_4698_cov_5.123508 1510..2541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1575.t1 ID=Gcaud1575.t1|Name=Gcaud1575.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=344bp
MSEFVWGFCAFVPSTYTLVQEQGLKKCLWVGRSKHTCRKLKNFAEPKFGR
AWTSSRSLREKSSECNPPSLPSSSVNALRFGILGWVSALALPTVLAYLDA
NAAQGAVTDYLGNYASHYYMVLYNGLFALLHSGLASLRPFLTRFTGERLY
RVGFALASLPSAIGLIAYFIAHRYDGKVLWTLQGAPFVHNLCYLITFISF
LFLYPATFNLLEVAAVQKPSFRIYETGIVRISRHPQLAGQVLWCFAHGAW
MGTSFTLVACLTLIAQHLVGAWNGDRRLRDKYGEEWIRYAERTSIVPFAS
VIDGKQRLRLKEFGVGYVGVVLFVLGTYAAHPWMLRVVGDLRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009915NnrU_dom