Gcaud1541.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud1541.t2
Unique Name	Gcaud1541.t2
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	187

Homology

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BLAST of Gcaud1541.t2 vs. uniprot
Match: A0A2V3J6I6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I6_9FLOR)

HSP 1 Score: 283 bits (723), Expect = 2.760e-92
Identity = 135/179 (75.42%), Postives = 154/179 (86.03%), Query Frame = 0

Query:    1 MTETIDKHNRFAPSRLWKEGPLRRIDTSEPFISIHARLGFGVGEYIKRFKLQMVGHTMDSVAYCMAKKAMFLAKQEGITRPPRFYLATDTAEFRLKLKRALTRMDSRTRVMYGTWGMKHVKKMQEKTSDDLKLFRYTFMDVYIMSKGRAILRSSSGFPNLAIWMGGIPSQLMFNINKDC 179
            M E IDKHNRFAPSRLWK+GPL+RIDT +PFIS+HARLG+GV EYIKRFK QM G TM+SVA CMA+ AM LAK+E +T PPRFYLATDT +FRL  K AL RMD + +VMYGTW MKHVK+MQ  T+DDL+LFRYTFMD+YIMSKG AILRS+SGFPNLA+WMGGIPSQ+ FNIN DC
Sbjct:  198 MAEIIDKHNRFAPSRLWKQGPLKRIDTGKPFISVHARLGYGVAEYIKRFKSQMSGRTMESVAECMAQIAMRLAKRENVTHPPRFYLATDTEQFRLMFKTALMRMDRQAKVMYGTWVMKHVKEMQGHTTDDLRLFRYTFMDLYIMSKGEAILRSNSGFPNLAVWMGGIPSQMGFNIN-DC 375

[Close]

BLAST of Gcaud1541.t2 vs. uniprot
Match: A0A2V3J6A2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6A2_9FLOR)

HSP 1 Score: 100 bits (249), Expect = 1.860e-21
Identity = 49/138 (35.51%), Postives = 84/138 (60.87%), Query Frame = 0

Query:   31 FISIHARLGFGVGEYIKRFKLQMVGHTMDSVAYCMAKKAMFLAKQEGITRPPRFYLATDTAEFRLKLKRALTRMDSRTRVMYGTWGMKHVKKM-QEKTSDDLKLFRYTFMDVYIMSKGRAILRSSSGFPNLAIWMGGI 167
            +IS+HAR+G+G  E   RF L+  G T +S+A CMA+ A+ +A Q  +  P  F++++DT  FR   K  + R+    +V    W   H+ ++ + ++   +  F  T++DVY++SKG+++L   SGF ++A+WMG I
Sbjct:  289 YISVHARVGYGFNETEARFNLKNQGLTPESLATCMAQMAVRMADQRRMLHPHHFFISSDTDHFRTLFKTEVNRLRPSAKVYQSNWQAVHMNRVGRSQSPSKVSDFMNTYVDVYLLSKGKSMLFIRSGFSHVALWMGAI 426

The following BLAST results are available for this feature:

BLAST of Gcaud1541.t2 vs. uniprot

BLAST of Gcaud1541.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J6I6_9FLOR	2.760e-92	75.42	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3J6A2_9FLOR	1.860e-21	35.51	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.11350		coord: 22..184 e-value: 1.5E-8 score: 36.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_717_length_19191_cov_4.160366	contig	NODE_717_length_19191_cov_4.160366:8724..9284 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud1541.t2	Gcaud1541.t2	Gracilaria caudata M_176_S67 male	mRNA	NODE_717_length_19191_cov_4.160366 8724..9284 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud1541.t2 ID=Gcaud1541.t2|Name=Gcaud1541.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=187bp
MTETIDKHNRFAPSRLWKEGPLRRIDTSEPFISIHARLGFGVGEYIKRFK
LQMVGHTMDSVAYCMAKKAMFLAKQEGITRPPRFYLATDTAEFRLKLKRA
LTRMDSRTRVMYGTWGMKHVKKMQEKTSDDLKLFRYTFMDVYIMSKGRAI
LRSSSGFPNLAIWMGGIPSQLMFNINKDCKQERSTV*