Gcaud1541.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1541.t1
Unique NameGcaud1541.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length446
Homology
BLAST of Gcaud1541.t1 vs. uniprot
Match: A0A2V3J6I6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I6_9FLOR)

HSP 1 Score: 546 bits (1408), Expect = 6.110e-192
Identity = 266/376 (70.74%), Postives = 309/376 (82.18%), Query Frame = 0
Query:   64 VQRALEDLNRILIERYVTWHHSVISKVQSGELDGSSVRTLVFIGNEGRHGLGDRVRGLLFAYMASVFSERLFLIKWNDPFPLSTVFVNSLRSNFTFDESLFPSRLNKDG-EVDVTKVVRAELTDMHLFTGKEAQLLFLCEPRPSFADVFNTVEKFPNLTTSIEMKKVLPFRRRPSADQFFPLIFKALFRPSAELRQMMTETIDKHNRFAPSRLWKEGPLRRIDTSEPFISIHARLGFGVGEYIKRFKLQMVGHTMDSVAYCMAKKAMFLAKQEGITRPPRFYLATDTAEFRLKLKRALTRMDSRTRVMYGTWGMKHVKKMQEKTSDDLKLFRYTFMDVYIMSKGRAILRSSSGFPNLAIWMGGIPSQLMFNINKDC 438
            +Q +L+ L R+LI+RYV WHHS +SKV+ GELDGSSVRTLVF+GNEGRHGLGDR+RG+LFAY+A+VFS RL LI W DPFPLSTV VNS+ SN+T+D SLFPSR  ++G E D   V +A L +MHLFTG    L+  CEPRPS  DVF  + KFP L TSI MKK+LP RRRP  +QFFPLIFKAL RPSA LR+MM E IDKHNRFAPSRLWK+GPL+RIDT +PFIS+HARLG+GV EYIKRFK QM G TM+SVA CMA+ AM LAK+E +T PPRFYLATDT +FRL  K AL RMD + +VMYGTW MKHVK+MQ  T+DDL+LFRYTFMD+YIMSKG AILRS+SGFPNLA+WMGGIPSQ+ FNIN DC
Sbjct:    1 MQESLQALKRVLIDRYVLWHHSTVSKVREGELDGSSVRTLVFVGNEGRHGLGDRLRGMLFAYLAAVFSNRLLLIHWQDPFPLSTVLVNSVHSNYTYDASLFPSRTKEEGGEEDKVYVKKATLMEMHLFTGIHRMLVLECEPRPSLDDVFKAMRKFPRLQTSIAMKKILPLRRRPHPNQFFPLIFKALLRPSAALRKMMAEIIDKHNRFAPSRLWKQGPLKRIDTGKPFISVHARLGYGVAEYIKRFKSQMSGRTMESVAECMAQIAMRLAKRENVTHPPRFYLATDTEQFRLMFKTALMRMDRQAKVMYGTWVMKHVKEMQGHTTDDLRLFRYTFMDLYIMSKGEAILRSNSGFPNLAVWMGGIPSQMGFNIN-DC 375          
BLAST of Gcaud1541.t1 vs. uniprot
Match: A0A2V3J6A2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6A2_9FLOR)

HSP 1 Score: 173 bits (438), Expect = 3.190e-45
Identity = 114/377 (30.24%), Postives = 185/377 (49.07%), Query Frame = 0
Query:   68 LEDLNRILIERYVTWHHSVISKVQSGELDGSSVRTLVFIGNEGRHGLGDRVRGLLFAYMASVFSERLFLIKWNDPFPLSTVFVNSLRSNFTFDESLFPSRLNKDGEVDVTKVVRAELTDMHLFTGKEAQLLFLCEPRPSFADVFNTV---EKF---PNLTTSIEMKKVLPFRR--RPSADQFFPLIFKALFRPSAELRQMMTETIDKHNR-------FAPSR--LWKEGPLRRIDTSEPFISIHARLGFGVGEYIKRFKLQMVGHTMDSVAYCMAKKAMFLAKQEGITRPPRFYLATDTAEFRLKLKRALTRMDSRTRVMYGTWGMKHVKKM-QEKTSDDLKLFRYTFMDVYIMSKGRAILRSSSGFPNLAIWMGGI 426
            +  L R +   Y+ WH   +   +       ++  LV+      +G+GD +RGLL +Y+ +V S+R+F I    PFPLS V  +    NFT+D  LFP   + +    + K +  +  D  L               P+  D   TV   E F   P L   +E+ K LP      P+ ++  P I KALF PS ELR ++    +  N        F+P +  LW+       +    +IS+HAR+G+G  E   RF L+  G T +S+A CMA+ A+ +A Q  +  P  F++++DT  FR   K  + R+    +V    W   H+ ++ + ++   +  F  T++DVY++SKG+++L   SGF ++A+WMG I
Sbjct:   69 MNQLLRAITSDYIDWHRQQLHICEENATHAQTIPKLVYRSMRRNYGVGDVIRGLLHSYLIAVISKRMFFIDVERPFPLSMVLTSPNGYNFTYDRYLFPELSSYEHIQWLRKSIYFDKLDTAL------------SDTPTLVDESQTVLDWELFLIIPRLYPQLEISKKLPQSSGFSPTREEVIPFILKALFCPSPELRSLLPGQENTDNLVWPLSTLFSPDQNLLWR-------NEMPAYISVHARVGYGFNETEARFNLKNQGLTPESLATCMAQMAVRMADQRRMLHPHHFFISSDTDHFRTLFKTEVNRLRPSAKVYQSNWQAVHMNRVGRSQSPSKVSDFMNTYVDVYLLSKGKSMLFIRSGFSHVALWMGAI 426          
BLAST of Gcaud1541.t1 vs. uniprot
Match: A0A2V3ILT8_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILT8_9FLOR)

HSP 1 Score: 94.7 bits (234), Expect = 2.050e-17
Identity = 97/380 (25.53%), Postives = 153/380 (40.26%), Query Frame = 0
Query:   65 QRALEDLNRI-LIERYVTWHHSVISKVQSGELDGSSVRTLVFIGNEGRHGLGDRVRGLLFAYMASVFSERLFLIKWNDPFPLSTVFVNSLRS---NFTFDESLFPSRLNKDGEVDVTKVVRAELTDMHLFTGKEAQLLFLCEPRPSFADVFNTVEKFPNLTTSIEMKKVLPFRRRPSAD-QFFPLIFKALFRPSAELRQMMTETIDKHNRFAPSRLWKEGPLRRIDTSEPFISIHARLGFGVGEYIKRFKLQMVGHTMDSVAYCMAKKAMFLAKQEGITRPPRFYLATDTAEFRLKLKRALTR-MDSRTRVMYGTWGMKHVKKMQEKTSDDLKLFRYTFMDVYIMSKGRAILRSSSGFPNLAIWMGGIPSQLMFNINKDC 438
            Q  L+D  R  L+ RY  WH     K             LV   NE   G+GDR   L+ A++ + FS R+ L+ W  P+PLS  F  S       FT D      +          K    +L   H+   K     F+  P+ +     + V  F      + + KV         +       F A+ +P+A L++++ +                   R+    +PFI +HARLG G+GE   RF     GH+ + VA C  K A+      GI +   +YLATDT  FR   +  L R   + + + +      H K  +   S+       T M++ ++SK   I+ S S F  +A ++G +  + +  + K C
Sbjct:   97 QSVLDDFFRQHLVNRYAKWHRENRRKAPR----------LVVRFNETNPGVGDRFSTLVSAFIIASFSNRVLLLDWIQPYPLSHFFSPSSAMPGIEFT-DADRREEQQKASSRYICDKQCTKKLHLGHVLGSKH----FIIYPQGATTSPQHLVAHFSTTHPRLPLSKVFANLTDVVTNVHVLSSAFNAMLKPAAPLKKLLEK-------------------RKRALKQPFIGVHARLGAGLGETGPRFGS---GHSPEQVAKCFVKSALGSGDTHGIRK---YYLATDTVPFRDVFENVLLRERPNASLIRFDDIMPVHTKGCKNNASECAS----TMMELIVLSKSSYIVASKSSFSRVAGYIGNVTVESL-GVIKQC 431          
BLAST of Gcaud1541.t1 vs. uniprot
Match: A0A2V3IQT8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQT8_9FLOR)

HSP 1 Score: 59.3 bits (142), Expect = 5.620e-6
Identity = 75/350 (21.43%), Postives = 133/350 (38.00%), Query Frame = 0
Query:  113 GLGDRVRGLLFAYMASVFSERLFLIKW-NDPFPLSTVFVNSLRSNFTFDESLFPSRLNKDGEVDVTKVVRAELTDMHLFTGKEAQLLFLCEPRPSFADVFNTVEKFPNLTTSIEMKKVLPFRRRPSADQFFPLIFKALFRP-----------------------------------SAELRQMMTETIDKHNRFAPSRLWKEGPLRRIDTSEPFISIHARLGFGVGEYIKRFKLQMVGHTMDSVAYCMAKKAMF----LAKQEGITRPPRFYLATDTAEFRLKLKRALTRMDSRTRVMYGTWGMKHVKKMQEKTSDD--LKLFRYTFMDVYIMSKGRAILRSSSGFPNLA 420
            GLGDRVRG+ FA + +V ++R+FL+ W +DPFP+                       ++  ++D T        + HLF    +    L    P     F ++   P  T    +  +L F   P+ +       +A++RP                                     ++++++T+ I     F PS    E   R      P++ +H R G   GE   RF L     T  S+       + F    L       R    Y+A+D+   ++ + +   R + R   +  T     V + +   S +   ++FR  F+D++++SK  A+  + SGF + A
Sbjct:    6 GLGDRVRGIQFALLLAVATQRVFLLDWPSDPFPIHIA--------------------SRPSQIDWTMPAHMSRREAHLFLSWYSCWKSLPCAVPK-NHRFPSLSYLPMQTKHSLVSGLLSFETPPTVN-ILRHDLRAIWRPYKVIRIAERLGYTAVQALLDNQRLQPYLGELSQYSKRDVKRLLTQMI-----FYPSESVSERMHRFGLQQAPYVGVHVRSGEDFGESDHRFDLVKSNLTTASLQILRCVTSAFQNNTLPLNSTSDRVLDMYVASDSKTLKVLMAQHAKRFNVRVHSLSSTAMHLAVNRREGVRSVEGWREMFRNVFVDLFMLSKSVALFTTGSGFSDAA 328          
The following BLAST results are available for this feature:
BLAST of Gcaud1541.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J6I6_9FLOR6.110e-19270.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6A2_9FLOR3.190e-4530.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILT8_9FLOR2.050e-1725.53Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis... [more]
A0A2V3IQT8_9FLOR5.620e-621.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 281..443
e-value: 1.5E-7
score: 32.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..445
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_717_length_19191_cov_4.160366contigNODE_717_length_19191_cov_4.160366:8724..10061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1541.t1Gcaud1541.t1Gracilaria caudata M_176_S67 malemRNANODE_717_length_19191_cov_4.160366 8724..10061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1541.t1 ID=Gcaud1541.t1|Name=Gcaud1541.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=446bp
MASFSFTRIVPFLIAFALLATILIQFSISSWRTTKYSSFFFEHATPENLA
PRNRRIKLKNVIKVQRALEDLNRILIERYVTWHHSVISKVQSGELDGSSV
RTLVFIGNEGRHGLGDRVRGLLFAYMASVFSERLFLIKWNDPFPLSTVFV
NSLRSNFTFDESLFPSRLNKDGEVDVTKVVRAELTDMHLFTGKEAQLLFL
CEPRPSFADVFNTVEKFPNLTTSIEMKKVLPFRRRPSADQFFPLIFKALF
RPSAELRQMMTETIDKHNRFAPSRLWKEGPLRRIDTSEPFISIHARLGFG
VGEYIKRFKLQMVGHTMDSVAYCMAKKAMFLAKQEGITRPPRFYLATDTA
EFRLKLKRALTRMDSRTRVMYGTWGMKHVKKMQEKTSDDLKLFRYTFMDV
YIMSKGRAILRSSSGFPNLAIWMGGIPSQLMFNINKDCKQERSTV*
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