Gcaud1537.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1537.t1
Unique NameGcaud1537.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length199
Homology
BLAST of Gcaud1537.t1 vs. uniprot
Match: A0A2V3IK21_9FLOR (CBS domain-containing protein CBSX3, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK21_9FLOR)

HSP 1 Score: 285 bits (729), Expect = 1.190e-95
Identity = 154/198 (77.78%), Postives = 166/198 (83.84%), Query Frame = 0
Query:    1 MALLLRSAALFRALAYTNVRALASTPTTAAASEPPAERSHAXXXXXXXALGTVRDVLKTKSEKFFYTFGDSLVYDAVKEMVKHNIGSLIIVEGATKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTKEFTYVNPDATLSHCMQLMTERRIRHIPVVEEGTDKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 198
            M+LL RSA LFR +     R LASTPT   A+ P +E   +        LGTVRDVLKTK EKFFYTFGD+LVYDAVKEMVKHNIGSLIIVEG  KKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTK+FT+VNPDATL+ CM+LMT RRIRHIPVVEEG+ KVLGMVSIGDIVSELVAAHKR+ EHMRSFISGSY
Sbjct:    1 MSLLRRSALLFRTITAQQFRPLASTPTAQPATPPESETKSSGSDR---GLGTVRDVLKTKGEKFFYTFGDALVYDAVKEMVKHNIGSLIIVEGDDKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTKKFTFVNPDATLTECMELMTVRRIRHIPVVEEGSHKVLGMVSIGDIVSELVAAHKREGEHMRSFISGSY 195          
BLAST of Gcaud1537.t1 vs. uniprot
Match: R7QA65_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA65_CHOCR)

HSP 1 Score: 253 bits (647), Expect = 7.290e-81
Identity = 138/188 (73.40%), Postives = 150/188 (79.79%), Query Frame = 0
Query:   11 FRALAYTNVRALASTPTTAAASEPPAERSHAXXXXXXXALGTVRDVLKTKSEKFFYTFGDSLVYDAVKEMVKHNIGSLIIVEGATKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTKEFTYVNPDATLSHCMQLMTERRIRHIPVVEEGTDKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 198
            FR LAY+  R  ASTP  AA   P A             LGTVRDVLKTK EKFFYT GD LVYDAVK+MV HNIGSLIIVEGA K+PVGI+TETDYLNKVIVRGRSS+STLVRDIMSTK+FT V P ATL  CM+LMTERRIRHIPVV+  + KVLGMVS+GDIVSELVAAH+R+AEHMRSFISG Y
Sbjct:  179 FRRLAYS--RPYASTPAAAA---PTATSDEKVPPSVEHGLGTVRDVLKTKGEKFFYTRGDDLVYDAVKKMVHHNIGSLIIVEGADKRPVGIITETDYLNKVIVRGRSSRSTLVRDIMSTKQFTSVAPSATLHECMELMTERRIRHIPVVDHQSHKVLGMVSVGDIVSELVAAHRRNAEHMRSFISGGY 361          
BLAST of Gcaud1537.t1 vs. uniprot
Match: A0A7S1XFL2_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFL2_9RHOD)

HSP 1 Score: 167 bits (424), Expect = 2.660e-49
Identity = 86/148 (58.11%), Postives = 112/148 (75.68%), Query Frame = 0
Query:   52 TVRDVLKTKSEKFFYTFGDSLVYDAVKEMVKHNIGSLIIVEGATK-KPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTKEFTYVNPDATLSHCMQLMTERRIRHIPVVEEGTDKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 198
            TV DVL  K E+ +  F D LV+DAVKEMVKHNIGSL++V+  T  KP+GIVTE DYL KVIV GR+SK++ ++ IMS K   +V P ATL +CM LM++ R+RHIPVV   +D++ G++SIGDIV+ELVA+HKR  E M ++I GSY
Sbjct:   52 TVADVLSLKGERQYTCFEDDLVFDAVKEMVKHNIGSLVVVDRKTPTKPIGIVTERDYLEKVIVLGRTSKTSTIKQIMSQKNLVWVTPTATLHYCMDLMSKNRVRHIPVVN--SDELQGLISIGDIVTELVASHKRVNEAMHTYIGGSY 197          
BLAST of Gcaud1537.t1 vs. uniprot
Match: A0A1X6PEM3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEM3_PORUM)

HSP 1 Score: 161 bits (408), Expect = 2.140e-46
Identity = 96/195 (49.23%), Postives = 120/195 (61.54%), Query Frame = 0
Query:   15 AYTNVRALASTPTTAAASEPPAERSHAXXXXXXX----ALGTVR--DVLKTKSEKFFYTFGDSLVYDAVKEMVKHNIGSLIIVEGATK-----KPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTKEFTYVNPDATLSHCMQLMTERRIRHIPVVEEGTDKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 198
            A+   RAL STP     + PP  R  A             GTVR  DVL  K E F+ T  D+LVYDA+ EMVKHNIGSL++VE A       KPVGI+TE DYL+KV++ GRSS++T V  IMS K+   V  D TL  CM LM   R+RHIPV+EE    + G++SIGD+V ELV +HKR+AE M  +I G +
Sbjct:   42 AWVATRALGSTPAXXXKAAPPPPRDAAAADGAGNKSMFTSGTVRVADVLALKGEVFYSTTADALVYDAIVEMVKHNIGSLVVVEPAEGGAGGLKPVGILTERDYLDKVVILGRSSRTTKVSAIMSEKKLVAVGGDTTLGDCMDLMVANRVRHIPVLEEN-GLLKGLISIGDVVKELVDSHKRNAESMSDYIRGGW 235          
BLAST of Gcaud1537.t1 vs. uniprot
Match: M2W8E0_GALSU (IMP dehydrogenase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W8E0_GALSU)

HSP 1 Score: 153 bits (386), Expect = 9.480e-43
Identity = 78/152 (51.32%), Postives = 109/152 (71.71%), Query Frame = 0
Query:   52 TVRDVLKTKSEKFFYTFGDSLVYDAVKEMVKHNIGSLIIVE----GATKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIM-STKEFTYVNPDATLSHCMQLMTERRIRHIPVVEEGTDKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 198
            TV D+LK K EKF+       VYDA+K+MV +N+GSL++++    G T KP+GIVTE DYL K+++ GRSSK+T V+DIM S      V+P A+L+ CM+LMT++RIRHIPV++   + V GMVSIGDIV ELV  H+ +A+ +  +I G+Y
Sbjct:  113 TVGDILKVKGEKFYRIKTTDFVYDAIKKMVDNNVGSLVVIDVDGDGITGKPLGIVTERDYLRKIVLLGRSSKTTYVKDIMTSANNLVSVSPSASLNDCMELMTQKRIRHIPVIDNDGN-VKGMVSIGDIVKELVEEHRHEAKKLNEYIQGTY 263          
BLAST of Gcaud1537.t1 vs. uniprot
Match: J3LSM1_ORYBR (Uncharacterized protein n=3 Tax=Oryzeae TaxID=147380 RepID=J3LSM1_ORYBR)

HSP 1 Score: 137 bits (346), Expect = 2.020e-37
Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 0
Query:   52 TVRDVLKTKSEK----FFYTFGDSLVYDAVKEMVKHNIGSLIIVE-GATKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTK-EFTYVNPDATLSHCMQLMTERRIRHIPVVEEGTDKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 198
            TV D+LK+K +     + +   D  VYDAVK M +HN+G+L++V+ G  K   GIVTE DYL K+IV+GRSSKST V DIM+ + +   V P   +   MQLMTE+RIRHIPV+E+GT  V GMVSIGDIV  +V+ H+ +   + ++I G Y
Sbjct:   55 TVADILKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGQDKVIAGIVTERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPGTRVLQAMQLMTEKRIRHIPVIEDGTGMV-GMVSIGDIVRAVVSEHREELNRLNAYIQGGY 206          
BLAST of Gcaud1537.t1 vs. uniprot
Match: A0A5J9WAY5_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9WAY5_9POAL)

HSP 1 Score: 136 bits (343), Expect = 5.700e-37
Identity = 74/153 (48.37%), Postives = 103/153 (67.32%), Query Frame = 0
Query:   52 TVRDVLKTKSE----KFFYTFGDSLVYDAVKEMVKHNIGSLIIVE-GATKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTK-EFTYVNPDATLSHCMQLMTERRIRHIPVVEEGTDKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 198
            TV DVLK+K +     + +   +  VYDAVK M +HN+G+L++++ G  K   GIVTE DYL K+IV+GRSSKST V DIM+ + +   V PD  +   MQLMTE+RIRHIPVV++G   V GMVSIGD+V  +V+ H+ +   + ++I G Y
Sbjct:   55 TVADVLKSKGKGADGSWLWCTTEDSVYDAVKSMTQHNVGALVVIKPGQEKSIAGIVTERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTEKRIRHIPVVDDGAGMV-GMVSIGDVVQTVVSEHREELNRLNAYIQGGY 206          
BLAST of Gcaud1537.t1 vs. uniprot
Match: A9RR66_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RR66_PHYPA)

HSP 1 Score: 136 bits (342), Expect = 8.520e-37
Identity = 75/153 (49.02%), Postives = 102/153 (66.67%), Query Frame = 0
Query:   52 TVRDVLKTKSEK----FFYTFGDSLVYDAVKEMVKHNIGSLIIVE-GATKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTK-EFTYVNPDATLSHCMQLMTERRIRHIPVVEEGTDKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 198
            T+ D+LK K ++    + +   D  VYDAVK M  HN+G+L++V+ GA KK  GI+TE DYL K+IV+GRSSK+T V DIM+ + +   V PD  +   M+LMT+ RIRHIPVVEE   K  GMVSIGD+V  +V  H+ + + + SFI G Y
Sbjct:   58 TIADILKEKGQQADGSWLWCSVDDTVYDAVKSMTAHNVGALLVVKSGAEKKLAGIITERDYLRKIIVQGRSSKTTKVGDIMTEENKLITVKPDTKVLRAMELMTDNRIRHIPVVEESGMK--GMVSIGDVVRAVVDEHREELQRLNSFIQGGY 208          
BLAST of Gcaud1537.t1 vs. uniprot
Match: B4G1D2_MAIZE (CBS domain protein n=18 Tax=Panicoideae TaxID=147369 RepID=B4G1D2_MAIZE)

HSP 1 Score: 135 bits (341), Expect = 1.110e-36
Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 0
Query:   52 TVRDVLKTKSEK----FFYTFGDSLVYDAVKEMVKHNIGSLIIVE-GATKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTK-EFTYVNPDATLSHCMQLMTERRIRHIPVVEEGTDKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 198
            TV DVLK+K +     + +   +  VYDAVK M +HN+G+L++V+ G  K   GIVTE DYL K+IV+GRSSKST V DIM+ + +   VNPD  +   MQLMTE R+RHIPV++ GT  +LGMVSIGD+V  +VA H+ +   +  +I G Y
Sbjct:   55 TVADVLKSKGKSADGSWLWCTTEDSVYDAVKSMTQHNVGALVVVKPGQNKSIAGIVTERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVNPDTKVLQAMQLMTENRVRHIPVID-GTG-MLGMVSIGDVVRAVVAEHREELNRLNDYIQGGY 205          
BLAST of Gcaud1537.t1 vs. uniprot
Match: S8CF55_9LAMI (Uncharacterized protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CF55_9LAMI)

HSP 1 Score: 135 bits (341), Expect = 1.110e-36
Identity = 71/153 (46.41%), Postives = 104/153 (67.97%), Query Frame = 0
Query:   52 TVRDVLKTKSE----KFFYTFGDSLVYDAVKEMVKHNIGSLIIVE-GATKKPVGIVTETDYLNKVIVRGRSSKSTLVRDIMSTK-EFTYVNPDATLSHCMQLMTERRIRHIPVVEEGTDKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY 198
            T+ D+L TK +     + +   D  VYDAVK M +HN+G+L++V+ G  K   GI+TE DYL K+IV+GRSSKST V DIM+ + +   V PD  +   MQLMT+ RIRHIPV++EG  +++GMVSIGD+V+ +V+ H+ +   + ++I G Y
Sbjct:   55 TISDILSTKGKAADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEVKSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLKAMQLMTDNRIRHIPVIKEG--EMIGMVSIGDVVNSVVSEHRDELNRLSAYIQGGY 205          
The following BLAST results are available for this feature:
BLAST of Gcaud1537.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK21_9FLOR1.190e-9577.78CBS domain-containing protein CBSX3, mitochondrial... [more]
R7QA65_CHOCR7.290e-8173.40Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1XFL2_9RHOD2.660e-4958.11Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A1X6PEM3_PORUM2.140e-4649.23Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2W8E0_GALSU9.480e-4351.32IMP dehydrogenase n=1 Tax=Galdieria sulphuraria Ta... [more]
J3LSM1_ORYBR2.020e-3749.67Uncharacterized protein n=3 Tax=Oryzeae TaxID=1473... [more]
A0A5J9WAY5_9POAL5.700e-3748.37Uncharacterized protein n=1 Tax=Eragrostis curvula... [more]
A9RR66_PHYPA8.520e-3749.02Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
B4G1D2_MAIZE1.110e-3649.67CBS domain protein n=18 Tax=Panicoideae TaxID=1473... [more]
S8CF55_9LAMI1.110e-3646.41Uncharacterized protein n=1 Tax=Genlisea aurea Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000644CBS domainSMARTSM00116cbs_1coord: 131..180
e-value: 2.5E-10
score: 50.3
coord: 63..112
e-value: 0.0011
score: 28.3
IPR000644CBS domainPFAMPF00571CBScoord: 63..110
e-value: 6.2E-6
score: 26.6
coord: 123..180
e-value: 8.3E-14
score: 51.8
IPR000644CBS domainPROSITEPS51371CBScoord: 127..185
score: 14.591482
IPR000644CBS domainPROSITEPS51371CBScoord: 58..118
score: 10.094445
NoneNo IPR availableGENE3D3.10.580.10coord: 47..198
e-value: 4.7E-42
score: 145.2
NoneNo IPR availablePANTHERPTHR43080CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIALcoord: 17..198
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..198
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..15
NoneNo IPR availableSUPERFAMILY54631CBS-domain paircoord: 52..180
IPR044725CBS domain-containing protein CBSX3, CBS domainCDDcd04623CBS_pair_bac_eukcoord: 70..176
e-value: 2.86593E-47
score: 149.103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2780_length_4706_cov_3.815601contigNODE_2780_length_4706_cov_3.815601:1699..2295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1537.t1Gcaud1537.t1Gracilaria caudata M_176_S67 malemRNANODE_2780_length_4706_cov_3.815601 1699..2295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1537.t1 ID=Gcaud1537.t1|Name=Gcaud1537.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=199bp
MALLLRSAALFRALAYTNVRALASTPTTAAASEPPAERSHAERSHAERAL
GTVRDVLKTKSEKFFYTFGDSLVYDAVKEMVKHNIGSLIIVEGATKKPVG
IVTETDYLNKVIVRGRSSKSTLVRDIMSTKEFTYVNPDATLSHCMQLMTE
RRIRHIPVVEEGTDKVLGMVSIGDIVSELVAAHKRDAEHMRSFISGSY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000644CBS_dom
IPR044725CBSX3_CBS_dom