Gcaud1534.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1534.t1
Unique NameGcaud1534.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length181
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1534.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 122..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..121
NoneNo IPR availableTMHMMTMhelixcoord: 102..121
NoneNo IPR availableTMHMMTMhelixcoord: 65..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1995_length_7284_cov_5.097873contigNODE_1995_length_7284_cov_5.097873:4498..5040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1534.t1Gcaud1534.t1Gracilaria caudata M_176_S67 malemRNANODE_1995_length_7284_cov_5.097873 4498..5040 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1534.t1 ID=Gcaud1534.t1|Name=Gcaud1534.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=181bp
MRTPASAEEVSRNLHLLDGSVKKKNNRLQKFVSEQTPLIETADDAKAELT
SKLDSHPVMRAYDMIEVIFDTAAVISVAVPIVISVVSSVTMFFQDKPNEA
TALDATGVAAGLGAPTVTVLVRRQVLKYVRSAVKDVVRQEANRLREDAVD
DMKEDAVDYLQDQLDDYLPFLADAHTSGEQ*
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