Gcaud1533.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1533.t1
Unique NameGcaud1533.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length167
Homology
BLAST of Gcaud1533.t1 vs. uniprot
Match: A0E6U0_PARTE (Protein kinase domain-containing protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0E6U0_PARTE)

HSP 1 Score: 57.8 bits (138), Expect = 1.060e-6
Identity = 44/159 (27.67%), Postives = 76/159 (47.80%), Query Frame = 0
Query:    7 GDVVVGRWRVGEFIGSGATGSVHYVSDLQRRRMNLVIKFGVPHQVRPPNSDLAYVCQGMWNERTALLALNNRDPSLKVPKVVESGTHDGVWFIIMTRFGPSICQRWETENRHFPNSTILKITYQVLSILKRIHASGVSHGDIEESNILEAGEGQDPNYL 165
            GD++ GR+R+G+ +G G+ GSV  + D Q     L IK  V  ++    S L         E   ++ L  + P    P+++  G  +   + IM   GP++    +     F   T+L++  Q+LS ++ +H+  + H DI+  N +  G GQ  N L
Sbjct:  151 GDIIQGRFRIGDLLGEGSFGSVFRIYDTQNSNQVLAIK--VEQELEEEESMLE-------REIKIMMELKKK-PGF--PQILYYGQENHYVYYIMNILGPNLEITSKKCGGSFSLVTMLRLAIQMLSRIETLHSMRLIHRDIKPDNFV-LGLGQQQNLL 296          
BLAST of Gcaud1533.t1 vs. uniprot
Match: A0A2U3LN79_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Candidatus Sulfopaludibacter sp. SbA4 TaxID=2043165 RepID=A0A2U3LN79_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 2.040e-6
Identity = 47/163 (28.83%), Postives = 72/163 (44.17%), Query Frame = 0
Query:    2 SQNFVGDVVVGRWRVGEFIGSGATGSVHYVSDLQRRRMNLVIKFGVPHQVRPPNSDLAYVCQGMWNERTALLALNNRDPSLKVPKVVESG-THDGVWFIIMTRFGPSICQRWETENRHFPNSTILKITYQVLSILKRIHASGVSHGDIEESNILEAGEGQDPN 163
            S+N VG V+ GR+R+ E IG G  G V+   DL  R   +VIK      +     D  ++ +   +E  AL  L +      + ++++ G T  G  F++M         R E +    P      I  Q+   L   H  G+ H D++  NI+ AGEG   N
Sbjct:   72 SENLVGVVLAGRYRIEEAIGRGGAGVVYRALDLTGRFGTVVIKL-----LHDEARDNPWLRRKFQSEAQALDRLEHPH----IVRILDHGETERGEPFLVMEHIAGRTL-RSEIQKGPLPLPLAASIVRQIGGALDAAHQCGIVHRDLKPENIMLAGEGVQTN 224          
The following BLAST results are available for this feature:
BLAST of Gcaud1533.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0E6U0_PARTE1.060e-627.67Protein kinase domain-containing protein n=2 Tax=P... [more]
A0A2U3LN79_9BACT2.040e-628.83Non-specific serine/threonine protein kinase n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000719Protein kinase domainPFAMPF00069Pkinasecoord: 16..155
e-value: 5.2E-8
score: 32.6
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 14..166
score: 11.411098
NoneNo IPR availableGENE3D1.10.510.10Transferase(Phosphotransferase) domain 1coord: 1..166
e-value: 2.7E-23
score: 84.6
IPR017441Protein kinase, ATP binding sitePROSITEPS00107PROTEIN_KINASE_ATPcoord: 20..44
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 9..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1995_length_7284_cov_5.097873contigNODE_1995_length_7284_cov_5.097873:2464..2964 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1533.t1Gcaud1533.t1Gracilaria caudata M_176_S67 malemRNANODE_1995_length_7284_cov_5.097873 2464..2964 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1533.t1 ID=Gcaud1533.t1|Name=Gcaud1533.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=167bp
MSQNFVGDVVVGRWRVGEFIGSGATGSVHYVSDLQRRRMNLVIKFGVPHQ
VRPPNSDLAYVCQGMWNERTALLALNNRDPSLKVPKVVESGTHDGVWFII
MTRFGPSICQRWETENRHFPNSTILKITYQVLSILKRIHASGVSHGDIEE
SNILEAGEGQDPNYLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR017441Protein_kinase_ATP_BS
IPR011009Kinase-like_dom_sf