Gcaud1532.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1532.t1
Unique NameGcaud1532.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length277
Homology
BLAST of Gcaud1532.t1 vs. uniprot
Match: A0A2V3J6S2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6S2_9FLOR)

HSP 1 Score: 194 bits (494), Expect = 1.150e-57
Identity = 124/263 (47.15%), Postives = 171/263 (65.02%), Query Frame = 0
Query:   13 ERERQLASDLLLLHRERQQIKAAFNAASSPLFHKLQKLALKRLQMAADHRDLQLASLKANFHLQLQQAYNEFECSKRRLRARMLTVNVDKRKRLDGMKSVQ--KKRKRSRGYYEQR------AARKATVSPFLNGLEKQGVLRVSVTPDELMADMNDLLNAIEVPVQKSSVQVDRIAADGV-VVLDKIHSSKGTLHYHDLRLEKGDAVELYSVG----KNSGVLKYGGVIMSVNAKEVQIREDNGTDHRISVSHLRSGKLSLK 262
            ERE+QL +DL LL RER QI AA +A  S L   L  +  KRLQ+AADHRDLQLA+L A F L+LQQA NE +  KR LRARML    ++R+RL  ++     ++R+R RG   +R      AAR   +  F   LE+QGVLRV++TPDE+ AD+  LL++++V  +  + +      DG     D+IHSSKGTLHY D+  EKGD V +++      ++S VL   GV+MSVNA+E+ +R  +GT HR++V+ LR+GKL+LK
Sbjct:   14 EREQQLDADLELLRRERNQIIAAADAPRSSLLRGLHAVMKKRLQLAADHRDLQLANLHAAFVLELQQATNELQRDKRALRARMLAHATERRRRLYRIRGANAARRRRRGRGAPAERGAALLCAARMGGLGSFAGALERQGVLRVALTPDEVSADLGVLLDSVDVANRGCAGRETDALGDGSGAASDRIHSSKGTLHYRDVSFEKGDQVTVFTAAADGKRSSSVL---GVLMSVNAREIHVRAQDGTHHRVAVAQLRTGKLALK 273          
BLAST of Gcaud1532.t1 vs. uniprot
Match: R7QCT4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCT4_CHOCR)

HSP 1 Score: 158 bits (399), Expect = 4.390e-42
Identity = 111/293 (37.88%), Postives = 166/293 (56.66%), Query Frame = 0
Query:   15 ERQLASDLLLLHRERQQIKAAFNAASSPLFHKLQKLALKRLQMAADHRDLQLASLKANFHLQLQQAYNEFECSKRRLRARMLTVNVDKRKRLD-----GMKS-------------------------------VQKKRKRSRGYYEQRAARKATVSP---FLNGLEKQGVLRVSVTPDELMADMNDLLNAIEVPVQKSS----VQVDRIAADGVVVLDKIHSSKGTLHYHDLRLEKGDAVELYSVGKNSGVL--KYGGVIMSVNAKEVQIREDNGTDHRISVSHLRSGKLSLK 262
            ERQL  DL  +  ER+ I AA  A  SP    L +   KRLQ AAD RD +LA+L+ANF +  QQA+N+F+ +K+ LR  +L V VD+R+R+D     GM S                               V K++KR      +R A++        FL  LEKQG+LRV+ TPDE+  D+  +L+ ++   Q++S    + VDR     V  +D+IHSS+G LHYHD+  EKGD V ++   + +G    +Y G+I++V++KE+ I+ D+G  HR+ V+HLR+G+L++K
Sbjct:  111 ERQLLEDLASIINERRDILAAVTAPCSPDLALLHQDLRKRLQSAADLRDYKLANLRANFDVDCQQAWNDFQRAKKDLRTDILNVAVDRRRRIDAIRASGMSSARHVPCSTFSPRLYFTSLTFSFSLSSHTPTAVAKRKKRRSSVGTERLAKRLRADGNRLFLASLEKQGMLRVAATPDEVNNDLALILHGMDS--QRASGPSRIGVDRPQDLSVRGVDRIHSSRGILHYHDITYEKGDRVAIFGQLRPNGTRGPRYAGIILAVSSKELHIKTDDGFPHRVYVTHLRNGRLAMK 401          
BLAST of Gcaud1532.t1 vs. uniprot
Match: A0A1X6PD23_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD23_PORUM)

HSP 1 Score: 61.6 bits (148), Expect = 4.770e-7
Identity = 45/132 (34.09%), Postives = 69/132 (52.27%), Query Frame = 0
Query:  140 LEKQGVLRVSVTPDELMADMNDLLNAIEVPVQKSSVQVDRIAA---DG------VVVLDKIHSSKGTLHYHDLRLEKGDAVELYSVGKNSGVLKYGGVIMSVNAKEVQIREDNGTDHRISVSHLRSGKLSLK 262
            L+++GV+RV++T DE+  D+  LL   +   +    +    AA   DG          + +  ++G L  H     +GD V + S    SG  KY G I S+N+KEVQIR+     HR+ VSHLR+ +L L+
Sbjct:  795 LQREGVVRVALTADEINGDLAALLATYDAAQRARGAERREAAAAAGDGRAGSGAASRTNDVVVARGVLQLHAETYAQGDHVAVLS--PKSGSPKYIGWICSINSKEVQIRDVRDVAHRVYVSHLRNNRLFLR 924          
The following BLAST results are available for this feature:
BLAST of Gcaud1532.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J6S2_9FLOR1.150e-5747.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QCT4_CHOCR4.390e-4237.88Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PD23_PORUM4.770e-734.09Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_332_length_29614_cov_4.285540contigNODE_332_length_29614_cov_4.285540:27875..28788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1532.t1Gcaud1532.t1Gracilaria caudata M_176_S67 malemRNANODE_332_length_29614_cov_4.285540 27875..28788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1532.t1 ID=Gcaud1532.t1|Name=Gcaud1532.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=277bp
MENSPPSAEGEAERERQLASDLLLLHRERQQIKAAFNAASSPLFHKLQKL
ALKRLQMAADHRDLQLASLKANFHLQLQQAYNEFECSKRRLRARMLTVNV
DKRKRLDGMKSVQKKRKRSRGYYEQRAARKATVSPFLNGLEKQGVLRVSV
TPDELMADMNDLLNAIEVPVQKSSVQVDRIAADGVVVLDKIHSSKGTLHY
HDLRLEKGDAVELYSVGKNSGVLKYGGVIMSVNAKEVQIREDNGTDHRIS
VSHLRSGKLSLKLVEGGNTNAAVMNT*
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