Gcaud1530.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1530.t1
Unique NameGcaud1530.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length226
Homology
BLAST of Gcaud1530.t1 vs. uniprot
Match: A0A2V3ICT4_9FLOR (Septum-promoting GTP-binding protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICT4_9FLOR)

HSP 1 Score: 399 bits (1024), Expect = 1.150e-139
Identity = 200/215 (93.02%), Postives = 206/215 (95.81%), Query Frame = 0
Query:   11 RDAQQDSGQPGPSPTAGRMSKAKGPINLQLKVGMLGDSYVGKTSLMVKYVENKFDEDYIQTLGINFMEKIVSVRERTITFTIFDLGGGENEFSQMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLVGTKFDLFASLSMDKQRDMIAHARKFAKAMRSPLIFTSSSHSINVQKLFKIVLSKRFNLKCNVPKMSNVGEPILEY 225
            +D Q  S QP PSP AGRMS+AKGP NLQLKVGMLGDSYVGKTSLMVKYVENKFDEDYIQTLGINFMEKI+SVRERT+TFTIFDLGGG+NEF+QMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLVGTKFDLFA LSMDKQRDMIAHAR FAKAMRSPLIFTSSSHSINVQKLFKIVLSKRFNLKCNVPKMSNVGEPILEY
Sbjct:   11 QDDQGSSSQPLPSPAAGRMSRAKGPTNLQLKVGMLGDSYVGKTSLMVKYVENKFDEDYIQTLGINFMEKIISVRERTVTFTIFDLGGGKNEFNQMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLVGTKFDLFAGLSMDKQRDMIAHARTFAKAMRSPLIFTSSSHSINVQKLFKIVLSKRFNLKCNVPKMSNVGEPILEY 225          
BLAST of Gcaud1530.t1 vs. uniprot
Match: A0A5J4YJF8_PORPP (Septum-promoting GTP-binding protein 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJF8_PORPP)

HSP 1 Score: 316 bits (810), Expect = 2.770e-107
Identity = 160/195 (82.05%), Postives = 175/195 (89.74%), Query Frame = 0
Query:   32 AKGP-INLQLKVGMLGDSYVGKTSLMVKYVENKFDEDYIQTLGINFMEKIVSVRERTITFTIFDLGGGENEFSQMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLVGTKFDLFASLSMDKQRDMIAHARKFAKAMRSPLIFTSSSHSINVQKLFKIVLSKRFNLKCNVPKMSNVGEPILEY 225
            A GP  N+QLKVGMLGDS VGKTSLMVKYVENKFDEDYIQTLGINFMEKI+S+R+RT+TFTIFDLGG E+EF  MIPLVCADA+AILFMFDLTRR TL+SV+EWYRQARG NQ FIPFLVGTKFD FASL  DKQ D I HARKFAKAM+SPL+FTS+SHSINVQKLFKIVLSKRFNLK  + ++SN GEPILEY
Sbjct:   18 AAGPGKNIQLKVGMLGDSAVGKTSLMVKYVENKFDEDYIQTLGINFMEKIISLRDRTVTFTIFDLGG-ESEFHSMIPLVCADASAILFMFDLTRRSTLQSVKEWYRQARGLNQAFIPFLVGTKFDSFASLPQDKQEDTINHARKFAKAMKSPLVFTSASHSINVQKLFKIVLSKRFNLKLTIEQLSNPGEPILEY 211          
BLAST of Gcaud1530.t1 vs. uniprot
Match: A0A7S2ZKT1_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZKT1_9RHOD)

HSP 1 Score: 300 bits (768), Expect = 8.410e-101
Identity = 141/193 (73.06%), Postives = 173/193 (89.64%), Query Frame = 0
Query:   33 KGPINLQLKVGMLGDSYVGKTSLMVKYVENKFDEDYIQTLGINFMEKIVSVRERTITFTIFDLGGGENEFSQMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLVGTKFDLFASLSMDKQRDMIAHARKFAKAMRSPLIFTSSSHSINVQKLFKIVLSKRFNLKCNVPKMSNVGEPILEY 225
            K P+N+Q+KVGM+GD  VGKTSLMVKYVEN+FDEDYIQTLGINFMEKI+++RE+T+TFTIFDLGG E+EF+ M+PLVC+DA+A+LFMFDLTRR TL+SV+EWYRQARG+NQTFIPFLVGTK+D F   S ++Q   +  ARK+A  M++PLIFTSSSHSINVQKLFK+VL+KRFNLK NVP+M+ +GEP+LEY
Sbjct:   26 KPPVNIQIKVGMVGDPAVGKTSLMVKYVENRFDEDYIQTLGINFMEKIIALREKTVTFTIFDLGG-ESEFNGMMPLVCSDASAMLFMFDLTRRATLQSVKEWYRQARGYNQTFIPFLVGTKYDQFTQQSAERQESTVKQARKYAAGMKAPLIFTSSSHSINVQKLFKVVLAKRFNLKVNVPQMTKMGEPVLEY 217          
BLAST of Gcaud1530.t1 vs. uniprot
Match: A0A1X6NWV4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWV4_PORUM)

HSP 1 Score: 290 bits (741), Expect = 2.140e-97
Identity = 134/170 (78.82%), Postives = 161/170 (94.71%), Query Frame = 0
Query:   56 MVKYVENKFDEDYIQTLGINFMEKIVSVRERTITFTIFDLGGGENEFSQMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLVGTKFDLFASLSMDKQRDMIAHARKFAKAMRSPLIFTSSSHSINVQKLFKIVLSKRFNLKCNVPKMSNVGEPILEY 225
            MVKYVEN+FDEDYIQTLGINFMEKI+++RERT+TFTIFDLGGGENEF+ MIPLVCADA+AILFMFDLTRR+TL+S++EWYRQARGFN  F+P LVGTKFD FASL++++Q+D +A+ARKFA+AM +PLIFTS+SHSINVQKLFKIVL+ RFNLKCNVP+MS+ G+PI+EY
Sbjct:    1 MVKYVENRFDEDYIQTLGINFMEKIITLRERTVTFTIFDLGGGENEFNSMIPLVCADASAILFMFDLTRRLTLQSIKEWYRQARGFNHVFVPLLVGTKFDTFASLAVERQQDTVANARKFARAMHAPLIFTSASHSINVQKLFKIVLAIRFNLKCNVPRMSSPGQPIIEY 170          
BLAST of Gcaud1530.t1 vs. uniprot
Match: A0A139AX91_GONPJ (Small GTPase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AX91_GONPJ)

HSP 1 Score: 273 bits (699), Expect = 2.290e-90
Identity = 131/186 (70.43%), Postives = 158/186 (84.95%), Query Frame = 0
Query:   40 LKVGMLGDSYVGKTSLMVKYVENKFDEDYIQTLGINFMEKIVSVRERTITFTIFDLGGGENEFSQMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLVGTKFDLFASLSMDKQRDMIAHARKFAKAMRSPLIFTSSSHSINVQKLFKIVLSKRFNLKCNVPKMSNVGEPILEY 225
            LKVGM+GDS +GKTSLMVKYVE  FD+DYIQTLG+NFMEK +S+R   ITF+I+DLGG + EF  M+PLVC DA AILFMFDL+R+ TL SV+EWYRQARGFN+T IPFL+GTKFD F++   ++Q D+   ARKFAKAM++PLIF S+SHSINVQK+FKIVLSK F+LKCN+P +SN GEPILEY
Sbjct:   29 LKVGMVGDSQIGKTSLMVKYVEGSFDDDYIQTLGVNFMEKTISIRNTDITFSIWDLGG-QKEFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKFDQFSAFPREEQEDITKQARKFAKAMKAPLIFCSTSHSINVQKIFKIVLSKAFDLKCNIPCISNYGEPILEY 213          
BLAST of Gcaud1530.t1 vs. uniprot
Match: Q54EY3_DICDI (Rab GTPase n=7 Tax=Dictyostelia TaxID=33083 RepID=Q54EY3_DICDI)

HSP 1 Score: 269 bits (687), Expect = 1.090e-88
Identity = 128/189 (67.72%), Postives = 159/189 (84.13%), Query Frame = 0
Query:   37 NLQLKVGMLGDSYVGKTSLMVKYVENKFDEDYIQTLGINFMEKIVSVRERTITFTIFDLGGGENEFSQMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLVGTKFDLFASLSMDKQRDMIAHARKFAKAMRSPLIFTSSSHSINVQKLFKIVLSKRFNLKCNVPKMSNVGEPILEY 225
            N+ +KVGM+GDS +GKTSLMVKYVE  FDEDYIQTLG+NFMEK +S+R   ITF+I+DLGG + EF  M+PLVC DA AILFMFDL+R+ TL SV+EWYRQARGFN+T IPFL+GTKFD+FA+  +++Q ++   ARKFA AM+SPLIF S+SHSINVQK+FKIV+SK F+L C +PK+  VGEP+LEY
Sbjct:   16 NVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTISIRGTEITFSIWDLGG-QREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKFDVFATKPIEEQEEITKQARKFASAMKSPLIFCSTSHSINVQKIFKIVISKAFDLNCTIPKVVGVGEPLLEY 203          
BLAST of Gcaud1530.t1 vs. uniprot
Match: A0A137P6B0_CONC2 (GTPase Spg1 n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P6B0_CONC2)

HSP 1 Score: 269 bits (687), Expect = 1.090e-88
Identity = 128/186 (68.82%), Postives = 158/186 (84.95%), Query Frame = 0
Query:   40 LKVGMLGDSYVGKTSLMVKYVENKFDEDYIQTLGINFMEKIVSVRERTITFTIFDLGGGENEFSQMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLVGTKFDLFASLSMDKQRDMIAHARKFAKAMRSPLIFTSSSHSINVQKLFKIVLSKRFNLKCNVPKMSNVGEPILEY 225
            +KVGM+GDS +GKTSLMVKYVE  FDEDYIQTLG+NFMEK +S+R   ITF+I+DLGG + EF  M+PLVC DA AILFMFDL+R+ TL S++EWYRQARGFN+T IPFLVGTK+D FA+ + D+Q ++   ARKFAKAM++PLIF S+SHSINVQK+FKIVLSK F+LKC +P++S +G PILEY
Sbjct:   15 IKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG-QREFVNMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDYFANFARDEQEEITKQARKFAKAMQAPLIFCSTSHSINVQKVFKIVLSKCFDLKCMIPEISEIGAPILEY 199          
BLAST of Gcaud1530.t1 vs. uniprot
Match: A0A197KJ19_9FUNG (Small monomeric GTPase n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A197KJ19_9FUNG)

HSP 1 Score: 267 bits (682), Expect = 7.440e-88
Identity = 125/186 (67.20%), Postives = 157/186 (84.41%), Query Frame = 0
Query:   40 LKVGMLGDSYVGKTSLMVKYVENKFDEDYIQTLGINFMEKIVSVRERTITFTIFDLGGGENEFSQMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLVGTKFDLFASLSMDKQRDMIAHARKFAKAMRSPLIFTSSSHSINVQKLFKIVLSKRFNLKCNVPKMSNVGEPILEY 225
            +KVGM+GDS +GKTSLMVKYVE  FDEDY+QTLG+NFMEK +S+R   ITF+I+DLGG + EF  M+PLVC DA AILFMFDL+R+ TL S++EWYRQARGFN+T IPFLVGTK+D F++ S ++Q ++   ARKFA+AM++PLIF S+SHSINVQK+FKIVLSK F+LKC +P++S  G PILEY
Sbjct:   21 IKVGMVGDSQIGKTSLMVKYVEGSFDEDYVQTLGVNFMEKTISIRNTEITFSIWDLGG-QREFVNMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDYFSTFSKEEQEEVTKQARKFARAMKAPLIFCSTSHSINVQKIFKIVLSKAFDLKCTIPEISEAGAPILEY 205          
BLAST of Gcaud1530.t1 vs. uniprot
Match: A0A5C5G3V0_9BASI (Small GTPase n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5G3V0_9BASI)

HSP 1 Score: 267 bits (682), Expect = 1.080e-87
Identity = 132/209 (63.16%), Postives = 168/209 (80.38%), Query Frame = 0
Query:   18 GQPGPSP-TAGRMSKAKGPINLQLKVGMLGDSYVGKTSLMVKYVENKFDEDYIQTLGINFMEKIVSVRERTITFTIFDLGGGENEFSQMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLVGTKFDLFASLSMDKQRDMIAHARKFAKAMRSPLIFTSSSHSINVQKLFKIVLSKRFNLKCNVPKMSNVGEPILEY 225
            G  GPS  +A R   A    ++ LKVGM+GDS +GKTSLMVKYVE  +DEDYIQTLG+NFMEK +S+R   ITF+I+DLGG + EF  M+PLVC DA AILFMFDL+R+ TL S++EWYRQARGFN+T IPFLVGTK+D +A+ S D+Q ++   A++F+KAM++PLIF S+SHSINVQK+FKIVLSK F+LKC +P++S VGEP+L Y
Sbjct:    5 GGAGPSTASAPRPPAADDKNSVVLKVGMVGDSQIGKTSLMVKYVEGSYDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG-QREFVSMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDHYATFSQDEQEEIARQAKRFSKAMKAPLIFCSTSHSINVQKIFKIVLSKAFDLKCTIPEISEVGEPLLIY 212          
BLAST of Gcaud1530.t1 vs. uniprot
Match: L1I689_GUITC (Uncharacterized protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1I689_GUITC)

HSP 1 Score: 266 bits (680), Expect = 1.770e-87
Identity = 128/186 (68.82%), Postives = 160/186 (86.02%), Query Frame = 0
Query:   40 LKVGMLGDSYVGKTSLMVKYVENKFDEDYIQTLGINFMEKIVSVRERTITFTIFDLGGGENEFSQMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLVGTKFDLFASLSMDKQRDMIAHARKFAKAMRSPLIFTSSSHSINVQKLFKIVLSKRFNLKCNVPKMSNVGEPILEY 225
            +KVGM+GD+ +GKTSLMVKYVE  FDEDYIQTLG+NFMEK VS+R   ITF+I+DLGG + EF  M+PLVC DAAAILFMFDL+R  TL+SV+EWYRQARGFN+T +  LVGTK+D+FAS + ++Q D+   AR++AKAM++PLIF+S+SHSINVQKLFKI+LS+ F+LKCN+PK+ N GEPILEY
Sbjct:   29 VKVGMVGDAQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTVSIRNANITFSIWDLGG-QKEFINMLPLVCNDAAAILFMFDLSRVGTLKSVKEWYRQARGFNKTAVAILVGTKYDIFASYTPEEQADITKQARRYAKAMKAPLIFSSASHSINVQKLFKILLSRVFDLKCNIPKIVNDGEPILEY 213          
The following BLAST results are available for this feature:
BLAST of Gcaud1530.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ICT4_9FLOR1.150e-13993.02Septum-promoting GTP-binding protein 1 n=1 Tax=Gra... [more]
A0A5J4YJF8_PORPP2.770e-10782.05Septum-promoting GTP-binding protein 1 n=1 Tax=Por... [more]
A0A7S2ZKT1_9RHOD8.410e-10173.06Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NWV4_PORUM2.140e-9778.82Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A139AX91_GONPJ2.290e-9070.43Small GTPase n=1 Tax=Gonapodya prolifera (strain J... [more]
Q54EY3_DICDI1.090e-8867.72Rab GTPase n=7 Tax=Dictyostelia TaxID=33083 RepID=... [more]
A0A137P6B0_CONC21.090e-8868.82GTPase Spg1 n=1 Tax=Conidiobolus coronatus (strain... [more]
A0A197KJ19_9FUNG7.440e-8867.20Small monomeric GTPase n=2 Tax=Mortierellaceae Tax... [more]
A0A5C5G3V0_9BASI1.080e-8763.16Small GTPase n=1 Tax=Rhodotorula diobovata TaxID=5... [more]
L1I689_GUITC1.770e-8768.82Uncharacterized protein n=2 Tax=Geminigeraceae Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 143..156
score: 39.62
coord: 40..61
score: 38.46
coord: 81..103
score: 24.49
coord: 183..205
score: 22.68
coord: 63..79
score: 30.02
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 37..209
e-value: 1.0E-4
score: -39.9
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 40..208
e-value: 3.5E-12
score: 42.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR47978FAMILY NOT NAMEDcoord: 32..224
NoneNo IPR availablePROSITEPS51419RABcoord: 30..225
score: 16.306564
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 42..204
e-value: 5.7E-8
score: -16.3
IPR001806Small GTPasePFAMPF00071Rascoord: 41..203
e-value: 1.2E-31
score: 109.5
IPR001806Small GTPasePROSITEPS51421RAScoord: 34..223
score: 8.812899
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 29..217
e-value: 1.4E-38
score: 134.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 37..215
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 40..202
e-value: 1.6E-18
score: 65.0
IPR017231Small GTPase Tem1/Spg1PIRSFPIRSF037527GTPase_Tem1coord: 2..225
e-value: 4.4E-100
score: 332.6
IPR017231Small GTPase Tem1/Spg1PANTHERPTHR47978:SF24PROTEIN TEM1coord: 32..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_332_length_29614_cov_4.285540contigNODE_332_length_29614_cov_4.285540:23822..24499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1530.t1Gcaud1530.t1Gracilaria caudata M_176_S67 malemRNANODE_332_length_29614_cov_4.285540 23822..24499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1530.t1 ID=Gcaud1530.t1|Name=Gcaud1530.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=226bp
MSAAGSSDAPRDAQQDSGQPGPSPTAGRMSKAKGPINLQLKVGMLGDSYV
GKTSLMVKYVENKFDEDYIQTLGINFMEKIVSVRERTITFTIFDLGGGEN
EFSQMIPLVCADAAAILFMFDLTRRVTLRSVQEWYRQARGFNQTFIPFLV
GTKFDLFASLSMDKQRDMIAHARKFAKAMRSPLIFTSSSHSINVQKLFKI
VLSKRFNLKCNVPKMSNVGEPILEY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR017231Small_GTPase_Tem1/Spg1