Gcaud1526.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1526.t1
Unique NameGcaud1526.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length180
Homology
BLAST of Gcaud1526.t1 vs. uniprot
Match: R7QDQ9_CHOCR (Small GTP-binding protein Arf1 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QDQ9_CHOCR)

HSP 1 Score: 339 bits (869), Expect = 1.480e-117
Identity = 166/179 (92.74%), Postives = 174/179 (97.21%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPNMTNRKWFVQACCATNGTGLYEGLDWLTENISD 179
            MGL+ISK+  SLLG+KEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKN++FTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRI EARDELKKMLSEEELRNATVLVFANKQDLPNAM VADLTQELGLPNM NRKWFVQACCATNGTGLYEGLDWLTEN+++
Sbjct:    1 MGLTISKLFTSLLGKKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIAEARDELKKMLSEEELRNATVLVFANKQDLPNAMAVADLTQELGLPNMPNRKWFVQACCATNGTGLYEGLDWLTENLAE 179          
BLAST of Gcaud1526.t1 vs. uniprot
Match: UPI001E1E1BD1 (ADP-ribosylation factor 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1BD1)

HSP 1 Score: 321 bits (823), Expect = 1.420e-110
Identity = 155/175 (88.57%), Postives = 167/175 (95.43%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPNMTNRKWFVQACCATNGTGLYEGLDWLTE 175
            MGLSISK+ ASL+G+++VRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNV FTVWDVGGQDKIRPLWRHYF NTQGL+YVVDSNDR+R+ EAR+EL KM+ EEELRNA+VLVFANKQDLPNAMPVADLTQELGLPN+  RKWFVQACCATNGTGLYEGLDWLTE
Sbjct:    1 MGLSISKLFASLMGKRDVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVSFTVWDVGGQDKIRPLWRHYFANTQGLVYVVDSNDRERVAEAREELLKMIGEEELRNASVLVFANKQDLPNAMPVADLTQELGLPNLAGRKWFVQACCATNGTGLYEGLDWLTE 175          
BLAST of Gcaud1526.t1 vs. uniprot
Match: A0A7S2ZI95_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZI95_9RHOD)

HSP 1 Score: 310 bits (794), Expect = 4.160e-106
Identity = 149/179 (83.24%), Postives = 167/179 (93.30%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPNMTNRKWFVQACCATNGTGLYEGLDWLTENISD 179
            MGL+ SK+ ASL+G+KE RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV+YKN+ FTVWDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRDR+ EAR+ELKKML EEELR+AT+LVFANKQDLPNAM V++LTQ+L LP+M NRKW+VQACCAT G GLYEGLDWLT+N+ D
Sbjct:    1 MGLTFSKLFASLVGKKECRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNINFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAREELKKMLFEEELRDATILVFANKQDLPNAMSVSELTQKLELPSMRNRKWYVQACCATKGDGLYEGLDWLTDNLPD 179          
BLAST of Gcaud1526.t1 vs. uniprot
Match: A0A8H3TPZ7_9TREE (Uncharacterized protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TPZ7_9TREE)

HSP 1 Score: 293 bits (749), Expect = 3.100e-99
Identity = 137/179 (76.54%), Postives = 165/179 (92.18%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPNMTNRKWFVQACCATNGTGLYEGLDWLTENISD 179
            MGLS+SK+L+SL G+KE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV+YKN+ FTVWDVGGQDKIRPLWRHYFQNTQG+I+VVDSNDRDR+ EAR+EL++MLSE+EL++A +LVFANKQDLPNAM  +DLT  LGL ++ NRKW++Q+ CAT+G GLYEGL+WL+ N+ +
Sbjct:    1 MGLSVSKLLSSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVSEAREELQRMLSEDELKDALLLVFANKQDLPNAMSASDLTDRLGLHSLRNRKWYIQSACATSGDGLYEGLEWLSTNLKN 179          
BLAST of Gcaud1526.t1 vs. uniprot
Match: UPI00044090DB (ARF/SAR n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI00044090DB)

HSP 1 Score: 292 bits (747), Expect = 6.260e-99
Identity = 137/177 (77.40%), Postives = 163/177 (92.09%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPNMTNRKWFVQACCATNGTGLYEGLDWLTENI 177
            MG++ SK+  SL+G+KE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV+YKN+ FTVWDVGGQDKIRPLWRHYFQNTQG+I+VVDSNDRDRI EAR+EL++ML+E+ELRNA +LVFANKQDLPNAM  A++T +LGLP++ NR W++QA CAT+G GLYEGL+WL+ NI
Sbjct:    1 MGMTFSKIFQSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRNALLLVFANKQDLPNAMNAAEITDKLGLPSLQNRIWYIQAACATSGDGLYEGLEWLSHNI 177          
BLAST of Gcaud1526.t1 vs. uniprot
Match: M2WZR6_GALSU (ADP-ribosylation factor n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WZR6_GALSU)

HSP 1 Score: 291 bits (746), Expect = 8.580e-99
Identity = 138/178 (77.53%), Postives = 160/178 (89.89%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPNMTNRKWFVQACCATNGTGLYEGLDWLTENIS 178
            MGLSISK+L+ L G+KE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV+YKN+ FTVWDVGGQDKIRPLWRHYFQNTQG+I+VVDSNDR+R PEAR+EL KMLSEEELR+A +LVFANKQDLPNA   A++   L LP++ NR WF+ +CCATNG GL+EGLDWL++ +S
Sbjct:    1 MGLSISKLLSRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGVIFVVDSNDRERFPEAREELHKMLSEEELRDAVLLVFANKQDLPNAASTAEVVNALALPSLRNRTWFIMSCCATNGDGLFEGLDWLSDQLS 178          
BLAST of Gcaud1526.t1 vs. uniprot
Match: M1CC02_SOLTU (ADP-ribosylation factor, arf n=15 Tax=Solanaceae TaxID=4070 RepID=M1CC02_SOLTU)

HSP 1 Score: 290 bits (743), Expect = 2.550e-98
Identity = 140/178 (78.65%), Postives = 160/178 (89.89%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPNMTNRKWFVQACCATNGTGLYEGLDWLTENIS 178
            MG+SISK +  L  +KE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV+YKN  FTVWDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRDRI EARDEL +ML+EEELR AT+LVFANKQDLPNAM VAD+T +LGL ++  R+W++Q+ CAT+G GLYEGLDWL+ NI+
Sbjct:    1 MGMSISKFVKMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNSSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRISEARDELHRMLNEEELRGATILVFANKQDLPNAMNVADITDKLGLHSLRQRRWYIQSACATSGQGLYEGLDWLSHNIT 178          
BLAST of Gcaud1526.t1 vs. uniprot
Match: M5WK44_PRUPE (Uncharacterized protein n=27 Tax=Mesangiospermae TaxID=1437183 RepID=M5WK44_PRUPE)

HSP 1 Score: 290 bits (741), Expect = 5.310e-98
Identity = 137/178 (76.97%), Postives = 162/178 (91.01%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPNMTNRKWFVQACCATNGTGLYEGLDWLTENIS 178
            MG++IS+++  L  +KE+RILMVGLDAAGKTTILYKLKLGE+VTTIPTIGFNVETV+YKNV FTVWDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRDR+ EARDEL +MLSE+ELR AT+LVFANKQDLPNAM V+++T +LGL ++  R+W++QA CAT+G GLYEGLDWL+ NIS
Sbjct:    1 MGMAISRMVKMLFARKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVSEARDELHRMLSEDELREATLLVFANKQDLPNAMSVSEITDKLGLHSLRQRRWYIQAACATSGQGLYEGLDWLSSNIS 178          
BLAST of Gcaud1526.t1 vs. uniprot
Match: A0A3S3Q2S8_9MAGN (ADP-ribosylation factor 1 isoform X2 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3Q2S8_9MAGN)

HSP 1 Score: 290 bits (741), Expect = 5.310e-98
Identity = 137/178 (76.97%), Postives = 162/178 (91.01%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPNMTNRKWFVQACCATNGTGLYEGLDWLTENIS 178
            MG++IS+++  L  +KE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNV FTVWDVGGQDKIRPLWRHYFQNTQGLI+V+DSND++RI EARDEL +MLSEEELR+AT+LVFANKQDLPNAM V+++T +LGL ++  R+W++Q+ CAT G GLYEGLDWL+ NIS
Sbjct:    1 MGMTISRLIRQLFSRKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVIDSNDKERISEARDELHRMLSEEELRDATLLVFANKQDLPNAMSVSEITDKLGLHSLRQRRWYIQSACATTGEGLYEGLDWLSNNIS 178          
BLAST of Gcaud1526.t1 vs. uniprot
Match: UPI001E8CF29E (ADP-ribosylation factor n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=UPI001E8CF29E)

HSP 1 Score: 290 bits (741), Expect = 5.310e-98
Identity = 136/177 (76.84%), Postives = 163/177 (92.09%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPNMTNRKWFVQACCATNGTGLYEGLDWLTENI 177
            MGL+ SK+  ++ G+KE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKN+ FTVWDVGGQDKIRPLWRHYFQNTQG+I+VVDSNDRDR+ EAR+EL++MLSE+ELR+A +LVFANKQDLPNAM  ADLT +LGLP++ +R+W++QA CAT+G GLYEGL+WL+ N+
Sbjct:    1 MGLNFSKLFNNMFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVAEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAADLTNKLGLPSLQSRQWYIQAACATSGDGLYEGLEWLSLNL 177          
The following BLAST results are available for this feature:
BLAST of Gcaud1526.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QDQ9_CHOCR1.480e-11792.74Small GTP-binding protein Arf1 n=2 Tax=Rhodymeniop... [more]
UPI001E1E1BD11.420e-11088.57ADP-ribosylation factor 1-like n=1 Tax=Mercenaria ... [more]
A0A7S2ZI95_9RHOD4.160e-10683.24Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A8H3TPZ7_9TREE3.100e-9976.54Uncharacterized protein n=1 Tax=Naganishia liquefa... [more]
UPI00044090DB6.260e-9977.40ARF/SAR n=1 Tax=Fomitiporia mediterranea (strain M... [more]
M2WZR6_GALSU8.580e-9977.53ADP-ribosylation factor n=2 Tax=Galdieria sulphura... [more]
M1CC02_SOLTU2.550e-9878.65ADP-ribosylation factor, arf n=15 Tax=Solanaceae T... [more]
M5WK44_PRUPE5.310e-9876.97Uncharacterized protein n=27 Tax=Mesangiospermae T... [more]
A0A3S3Q2S8_9MAGN5.310e-9876.97ADP-ribosylation factor 1 isoform X2 n=1 Tax=Cinna... [more]
UPI001E8CF29E5.310e-9876.84ADP-ribosylation factor n=1 Tax=Filobasidium flori... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 19..42
score: 52.45
coord: 74..99
score: 33.26
coord: 119..140
score: 32.09
coord: 47..71
score: 33.41
IPR006689Small GTPase superfamily, ARF/SAR typeSMARTSM00178sar_sub_1coord: 5..177
e-value: 3.0E-31
score: 119.8
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 6..177
e-value: 5.2E-78
score: 260.5
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..169
e-value: 9.1E-4
score: -62.7
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..179
e-value: 1.7E-114
score: 396.4
NoneNo IPR availablePANTHERPTHR11711:SF383ADP-RIBOSYLATION FACTOR A1Bcoord: 1..178
NoneNo IPR availablePROSITEPS51417ARFcoord: 11..177
score: 25.219767
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 5..179
e-value: 7.2E-80
score: 269.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..177
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 16..156
e-value: 7.1E-23
score: 79.1
IPR024156Small GTPase superfamily, ARF typePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..178
IPR045872ADP-ribosylation factor 1-5CDDcd04150Arf1_5_likecoord: 18..176
e-value: 6.85974E-111
score: 310.878

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_332_length_29614_cov_4.285540contigNODE_332_length_29614_cov_4.285540:16481..17290 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1526.t1Gcaud1526.t1Gracilaria caudata M_176_S67 malemRNANODE_332_length_29614_cov_4.285540 16481..17290 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1526.t1 ID=Gcaud1526.t1|Name=Gcaud1526.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=180bp
MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
FNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRI
PEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPNMTN
RKWFVQACCATNGTGLYEGLDWLTENISD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR024156Small_GTPase_ARF
IPR045872Arf1-5-like