Gcaud1525.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1525.t1
Unique NameGcaud1525.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length115
Homology
BLAST of Gcaud1525.t1 vs. uniprot
Match: A0A2V3ICS6_9FLOR (Protein PROTON GRADIENT REGULATION 5, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICS6_9FLOR)

HSP 1 Score: 167 bits (423), Expect = 1.170e-51
Identity = 81/111 (72.97%), Postives = 93/111 (83.78%), Query Frame = 0
Query:    4 AFIAATPVTTSRTALTGEAICARQPVVPINSAQTAKWTMARKSKFGPFTPAVITARLVIGDKRLNKVRGKAIALHSQAITAFCEFTGAGPKMRQNLIRLAKQNGNDLGFLS 114
            AF+AATPV+ SRT   G A+C R+P +     Q AKWTM R SKFGPFTPAVI  RL+IGDKRLNKVRGKAI+LHSQAITAFC+FTGAGP+MRQNLIR+AK+NG+ LGFLS
Sbjct:    4 AFVAATPVSASRTDFVGHAVCNRRPAIENTDIQQAKWTMGRLSKFGPFTPAVIATRLIIGDKRLNKVRGKAISLHSQAITAFCDFTGAGPRMRQNLIRVAKKNGDTLGFLS 114          
BLAST of Gcaud1525.t1 vs. uniprot
Match: A1YSQ5_NEOYE (PGR5 n=1 Tax=Neopyropia yezoensis TaxID=2788 RepID=A1YSQ5_NEOYE)

HSP 1 Score: 125 bits (313), Expect = 8.620e-35
Identity = 63/93 (67.74%), Postives = 72/93 (77.42%), Query Frame = 0
Query:   28 PVVPINSA------QTAKWTMARKSKFGPFTPAVITARLVIGDKRLNKVRGKAIALHSQAITAFCEFTGAGPKMRQNLIRLAKQNGNDLGFLS 114
            PV PI S+        AKW MAR +KFGPFTP +   RLVIGDK LNK+ GK IALHSQAITAFC+F+G GPKMRQNLIR+AK+NG+ LGFLS
Sbjct:   31 PVCPIPSSVLFARPAAAKWIMARVAKFGPFTPLLKLTRLVIGDKPLNKLLGKGIALHSQAITAFCDFSGTGPKMRQNLIRVAKENGSKLGFLS 123          
BLAST of Gcaud1525.t1 vs. uniprot
Match: A0A1X6NYK0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYK0_PORUM)

HSP 1 Score: 121 bits (304), Expect = 1.840e-33
Identity = 66/119 (55.46%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    4 AFIAATPVTTSR----TALTGEAICARQPVVPINSAQTAKWTMA----RKSKFGPFTPAVITARLVIGDKRLNKVRGKAIALHSQAITAFCEFTGAGPKMRQNLIRLAKQNGNDLGFLS 114
            AF+AA P++ +R     A +  A+    PV P  ++            R +KFGPFTPA++  RLVIGDK LNK+RGK IALHSQAITAFC+F+G GPKMRQNLIR+AK+NG+ LGFLS
Sbjct:    2 AFVAAAPLSLNRRPALAAASSPALAGAFPVCPTPASVVXXXXXXXXXXRVAKFGPFTPALVLTRLVIGDKPLNKLRGKGIALHSQAITAFCDFSGTGPKMRQNLIRVAKENGSKLGFLS 120          
BLAST of Gcaud1525.t1 vs. uniprot
Match: A0A5J4YR59_PORPP (Protein PROTON GRADIENT REGULATION 5, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YR59_PORPP)

HSP 1 Score: 107 bits (266), Expect = 1.120e-27
Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 0
Query:   23 ICA-RQPVVPINSAQTAKWTMARKSKFGPFTPAVITARLVIGDKRLNKVRGKAIALHSQAITAFCEFTGAGPKMRQNLIRLAKQNGNDLGFLS 114
            +CA R  V P  +A  A WTM +K+ FGPFTP V+T R+VIG+KR N +RGK I+LHSQ I  FC + GA  K +Q LIRLAK NG+ LGFLS
Sbjct:   31 LCAQRARVAPRRAA--AAWTMGKKADFGPFTPVVVTTRIVIGEKRFNALRGKGISLHSQVIGNFCGYVGASGKTKQGLIRLAKNNGSKLGFLS 121          
BLAST of Gcaud1525.t1 vs. uniprot
Match: A0A7S3EBI0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EBI0_9RHOD)

HSP 1 Score: 107 bits (268), Expect = 2.300e-27
Identity = 55/94 (58.51%), Postives = 69/94 (73.40%), Query Frame = 0
Query:   23 ICARQPVV-PINSAQTA-KWTMARKSKFGPFTPAVITARLVIGDKRLNKVRGKAIALHSQAITAFCEFTGAGPKMRQNLIRLAKQNGNDLGFLS 114
            +CA +  V P+  A+   +W+MA+ +KFG F+P VI AR+VIG+KR NKVRGK IALHSQ I  FC++ GA PK+R  LI LAK NGN LGFLS
Sbjct:   79 VCANRAAVRPVPVARNEPRWSMAKVAKFGVFSPIVIAARVVIGEKRFNKVRGKGIALHSQVIGDFCKYIGAEPKVRTGLIGLAKNNGNTLGFLS 172          
BLAST of Gcaud1525.t1 vs. uniprot
Match: A0A7S0N6F4_9CRYP (Hypothetical protein n=2 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N6F4_9CRYP)

HSP 1 Score: 103 bits (256), Expect = 4.240e-26
Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 0
Query:   35 AQTAKWTMARKSKFGPFTPAVITARLVIGDKRLNKVRGKAIALHSQAITAFCEFTGAGPKMRQNLIRLAKQNGNDLGFLS 114
            ++   W M +++ FGPFTPAVI AR V+G+KR N++RGKAI LHSQ IT F  + G   +MRQ LIRLAK NGN LGFLS
Sbjct:   47 SKQVSWRMGKQAAFGPFTPAVIAARSVLGEKRFNQIRGKAITLHSQVITEFGNYAGVPREMRQGLIRLAKTNGNTLGFLS 126          
BLAST of Gcaud1525.t1 vs. uniprot
Match: A0A7S2XY75_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY75_9STRA)

HSP 1 Score: 102 bits (255), Expect = 5.840e-26
Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 0
Query:   28 PVVPINSAQTAKWTMARKSKFGPFTPAVITARLVIGDKRLNKVRGKAIALHSQAITAFCEFTGAGPKMRQNLIRLAKQNGNDLGFL 113
            P VP+ + +     MA+ +KFG F+PAV  A++V+GDK LNKVRGK IALHSQAIT FC++ G   ++R  +I+LAK NG+ LGFL
Sbjct:   39 PTVPVTATRGQYSMMAKVAKFGVFSPAVFAAKVVLGDKELNKVRGKGIALHSQAITEFCQYIGTSTQLRSRIIKLAKTNGDTLGFL 124          
BLAST of Gcaud1525.t1 vs. uniprot
Match: L1JH01_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JH01_GUITC)

HSP 1 Score: 100 bits (248), Expect = 9.900e-25
Identity = 47/81 (58.02%), Postives = 61/81 (75.31%), Query Frame = 0
Query:   34 SAQTAKWTMARKSKFGPFTPAVITARLVIGDKRLNKVRGKAIALHSQAITAFCEFTGAGPKMRQNLIRLAKQNGNDLGFLS 114
            +A+ AK  M ++S FGPFTP V+  R V+G+K+ N++RGKAI LHSQ IT FC +TG   ++RQ LI+LAK NGN LGFLS
Sbjct:   61 AAKPAK--MGKQSAFGPFTPLVVATRAVVGEKQFNQIRGKAITLHSQVITEFCSYTGTTREIRQGLIKLAKNNGNTLGFLS 139          
BLAST of Gcaud1525.t1 vs. uniprot
Match: A0A6U5CCX5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U5CCX5_HEMAN)

HSP 1 Score: 97.4 bits (241), Expect = 1.610e-23
Identity = 44/73 (60.27%), Postives = 55/73 (75.34%), Query Frame = 0
Query:   42 MARKSKFGPFTPAVITARLVIGDKRLNKVRGKAIALHSQAITAFCEFTGAGPKMRQNLIRLAKQNGNDLGFLS 114
            M +++ FGPFTP VI AR V+G+K+ N++RGK I LHSQ IT FC + G   ++RQ LIRLAK NGN LGFLS
Sbjct:   80 MGKQAAFGPFTPIVIGARSVVGEKKFNQIRGKGITLHSQVITEFCSYAGVPRELRQGLIRLAKANGNTLGFLS 152          
BLAST of Gcaud1525.t1 vs. uniprot
Match: A0A6U0UVH1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UVH1_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.570e-23
Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 0
Query:   31 PINSAQTAKWTMARK-SKFGPFTPAVITARLVIGDKRLNKVRGKAIALHSQAITAFCEFTGAGPKMRQNLIRLAKQNGNDLGFL 113
            PI +++ +   M  K +KFGPF+PAV  A++V+G++RLNK+RGK IALHSQAIT FC + G   KMR  +I+LAK NG+ LGFL
Sbjct:   34 PIIASRGSNLHMGGKVAKFGPFSPAVYAAKIVLGEQRLNKIRGKGIALHSQAITYFCNWAGTQGKMRNRVIKLAKTNGDRLGFL 117          
The following BLAST results are available for this feature:
BLAST of Gcaud1525.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ICS6_9FLOR1.170e-5172.97Protein PROTON GRADIENT REGULATION 5, chloroplasti... [more]
A1YSQ5_NEOYE8.620e-3567.74PGR5 n=1 Tax=Neopyropia yezoensis TaxID=2788 RepID... [more]
A0A1X6NYK0_PORUM1.840e-3355.46Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YR59_PORPP1.120e-2758.06Protein PROTON GRADIENT REGULATION 5, chloroplasti... [more]
A0A7S3EBI0_9RHOD2.300e-2758.51Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0N6F4_9CRYP4.240e-2660.00Hypothetical protein n=2 Tax=Cryptomonas curvata T... [more]
A0A7S2XY75_9STRA5.840e-2654.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
L1JH01_GUITC9.900e-2558.02Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A6U5CCX5_HEMAN1.610e-2360.27Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A6U0UVH1_9STRA2.570e-2355.95Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037497Protein PROTON GRADIENT REGULATION 5PANTHERPTHR35709PROTEIN PROTON GRADIENT REGULATION 5, CHLOROPLASTICcoord: 37..113
NoneNo IPR availablePANTHERPTHR35709:SF1PROTEIN PROTON GRADIENT REGULATION 5, CHLOROPLASTICcoord: 37..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_332_length_29614_cov_4.285540contigNODE_332_length_29614_cov_4.285540:15251..15595 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1525.t1Gcaud1525.t1Gracilaria caudata M_176_S67 malemRNANODE_332_length_29614_cov_4.285540 15251..15595 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1525.t1 ID=Gcaud1525.t1|Name=Gcaud1525.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=115bp
MCSAFIAATPVTTSRTALTGEAICARQPVVPINSAQTAKWTMARKSKFGP
FTPAVITARLVIGDKRLNKVRGKAIALHSQAITAFCEFTGAGPKMRQNLI
RLAKQNGNDLGFLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037497PGR5