Gcaud1460.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1460.t1
Unique NameGcaud1460.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length245
Homology
BLAST of Gcaud1460.t1 vs. uniprot
Match: A0A2V3IIU9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIU9_9FLOR)

HSP 1 Score: 287 bits (734), Expect = 6.250e-95
Identity = 150/245 (61.22%), Postives = 188/245 (76.73%), Query Frame = 0
Query:    1 MVSPGPEKHSDEKVLLEGPVECKTLHSADDAARTVKEMVAMMKNMDPEVVRRLVQARTAAESIQLAFPGGDQRFTDMDCDTDDVEDGEDYEEHEVPLTGSSEKPFKED-PEEEEDVCYGLLDNSLYRSPQVCLTKTKEKYGFDIVSDMNAAGLNLIERIRLVNYVRKLKNDNVPTDDIIRRSHAVLSERNEEILDNDSLLIPVVEGDLLLTALETGDEFDNDFRREASAVRDAVEASLREEQILP 244
            MVSP  EK + E+    GP EC++   A++AA  V+EM++ MK+MDPE+VRRLVQAR AAESI LAFP GDQRF DMDCD D      D E+ +    GS++       P+E+E+VCYGLLDN+LYRSPQ+CL KTKEK+ FDIVSDMNAAGLNLIERIRLVNY+RKL  ++ P + II+R+ AV+SER+EE+L+NDSLLIPV+EGDLLLTALET +E   D  R A+ ++DA+EAS REE I+P
Sbjct:    1 MVSPAQEKEATERTAAAGPSECRSRQPAEEAAHAVQEMLSTMKHMDPEIVRRLVQARNAAESIHLAFPEGDQRFADMDCDFDXX--XXDMEQSDSLDVGSTDPNSGYGAPDEDEEVCYGLLDNALYRSPQICLLKTKEKHDFDIVSDMNAAGLNLIERIRLVNYIRKLVTESTPVEQIIQRARAVISERDEEVLENDSLLIPVIEGDLLLTALETDEELHKDSERGATDMQDAIEASFREENIIP 243          
BLAST of Gcaud1460.t1 vs. uniprot
Match: A0A7S0BQS1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQS1_9RHOD)

HSP 1 Score: 72.0 bits (175), Expect = 2.050e-12
Identity = 40/125 (32.00%), Postives = 74/125 (59.20%), Query Frame = 0
Query:  111 EEEDVCYGLLDNSLYRSPQVCLTKTKEKYGFDIVSDMNAAGLNLIERIRLVNYVRKLKNDNVPTDDIIRRSHAVLSERNEEILDNDSLLIPVVEGDLLLTALETGDEFDNDFRRE--ASAVRDAV 233
            E++  C GL D+    SP  CL ++K +Y  DI+       L++ +RIRLVNY+RK +  ++    ++ +    L+++ + I  ++SLL P+++ D +LT LE  ++++++   +  A AVR AV
Sbjct:    3 EQDQPCLGLFDDITDPSPAACLRRSKNEYNVDILQISTERKLDIYQRIRLVNYIRKRRIHDLIDGQVLSQEVNSLAKK-DPIFSDESLLTPIIDDDAILTVLEAEEDWEDEEDEQVVADAVRRAV 126          
BLAST of Gcaud1460.t1 vs. uniprot
Match: A0A7S2ZMP2_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMP2_9RHOD)

HSP 1 Score: 70.1 bits (170), Expect = 6.340e-11
Identity = 65/228 (28.51%), Postives = 99/228 (43.42%), Query Frame = 0
Query:   10 SDEKVLLEGPVECKTLHSADDAARTVKEMVAMMKNMDPEVVRRLVQARTAAESIQ-LAFPGGDQRFTDMDCDTDDVEDGEDYEEHEVPLTGSSEKPFKEDPEEEEDVCYGLLDNSLYRSPQVCLTKTKEKYGFDIVSDMNAAGLNLIERIRLVNYVRKLK-NDNVPTDDIIRRSHAVLSERNEEILDNDSLLIPVVEGDLLLTALETGDEFDNDFRRE--ASAVRDAV 233
            SD+K +   P  CK     DDA      M   M    PEVV  LV AR  AE          ++R   +D D                           DP                 SP  CL ++K +Y  DI+       L+  +RIRLVNY+RK + +D V   D+ +  +++  +  + +L+++SLL P+V+ D LLT LE  ++++++   +  A AVR AV
Sbjct:    9 SDQKGI--EPSGCKDRGRVDDAYEAASGMRDEMSAYSPEVVAELVNARKVAEGADDWQREELEERRNTLDEDDQXXXXXXXXXXXXXXXXXXXXXXXXTDP-----------------SPAACLRRSKIEYNVDILQIAAERNLDFYQRIRLVNYIRKRRIHDRVDAQDLAQEVNSITEK--DPVLNDESLLTPIVDDDALLTVLEVDEDWEDEEDEQVVADAVRRAV 215          
BLAST of Gcaud1460.t1 vs. uniprot
Match: A0A2I2FCZ5_9EURO (Protein arginine methyltransferase RmtB n=3 Tax=Aspergillus TaxID=5052 RepID=A0A2I2FCZ5_9EURO)

HSP 1 Score: 60.8 bits (146), Expect = 4.480e-7
Identity = 42/134 (31.34%), Postives = 70/134 (52.24%), Query Frame = 0
Query:  108 DPEEEEDVCYGLLDNSLYRSPQVCLTKTKEKYGFDIVSDMNAAGLNLIERIRLVNYVR-KLKNDNVPTDDIIRRSHAVLSERNEEILDNDSLLIPVVEGDLLLTALETGDEFDNDFRREASAVRDAVEASLREE 240
            +P++E     GL    +Y      L +TKEKY FD+       GL+ +E+I+LVNY+R ++K  N+  D              +E  ++D+ L PV+E D LL +L+  ++ +++  R   A +  VE  L+EE
Sbjct:   37 EPDDETQPVVGLFSEKVYPDVHAMLKETKEKYSFDLQKIQRELGLDFLEKIKLVNYLRSQVKAGNMSPD-----------VSTKEKFEDDAYLKPVLEDDALLYSLDDIEDTESEAPRGTEADKRVVE--LQEE 157          
The following BLAST results are available for this feature:
BLAST of Gcaud1460.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IIU9_9FLOR6.250e-9561.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0BQS1_9RHOD2.050e-1232.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZMP2_9RHOD6.340e-1128.51Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A2I2FCZ5_9EURO4.480e-731.34Protein arginine methyltransferase RmtB n=3 Tax=As... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..108
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 106..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_566_length_21798_cov_4.589994contigNODE_566_length_21798_cov_4.589994:12809..13543 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1460.t1Gcaud1460.t1Gracilaria caudata M_176_S67 malemRNANODE_566_length_21798_cov_4.589994 12809..13543 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1460.t1 ID=Gcaud1460.t1|Name=Gcaud1460.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=245bp
MVSPGPEKHSDEKVLLEGPVECKTLHSADDAARTVKEMVAMMKNMDPEVV
RRLVQARTAAESIQLAFPGGDQRFTDMDCDTDDVEDGEDYEEHEVPLTGS
SEKPFKEDPEEEEDVCYGLLDNSLYRSPQVCLTKTKEKYGFDIVSDMNAA
GLNLIERIRLVNYVRKLKNDNVPTDDIIRRSHAVLSERNEEILDNDSLLI
PVVEGDLLLTALETGDEFDNDFRREASAVRDAVEASLREEQILP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf