Gcaud1443.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1443.t1
Unique NameGcaud1443.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length338
Homology
BLAST of Gcaud1443.t1 vs. uniprot
Match: A0A2V3IGM0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGM0_9FLOR)

HSP 1 Score: 463 bits (1191), Expect = 2.500e-161
Identity = 255/345 (73.91%), Postives = 284/345 (82.32%), Query Frame = 0
Query:    8 PAPITSRSRYVTPALCQSVRLAARSTRVRWSCCSSV--DPVEAAVAEGETLRRQLEDISESRREQAERTNEALMKMASQISAITAKLRADAGMPPVADPXXXXXXXXXXXXXXXXXXXXXXXX-------------ASDEPYMDPKNFGYESTAGWQVLEASDDLPENERNLRFRIECDMHGCSLIEVKGDVPPGPGVRQKFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALGYDEIRHFKRLCLSLQKRMDRIGRGEEDPPIKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWTQALGQPSPGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLRIE 337
            P P+T+RS         ++R  A  +RV W  C++   D V AA+ EG+ LR +L+++SESRR QAERTN AL +MA++IS I AKLRADAGMPPVA+      XXXXXXXXXXXXXXXXXXX             ASDEPYMDPKNFGYESTAGWQVL+ASD+LPENE NL+FRIECDMHGCSLI+VKGD PPGPGVRQ ++QSG  FRVG+DPEAPKSFCAMVGNDQWL+AL YDEIRHFKRLCLSLQKRMDRIGRGEEDPP+KKPAVRRSGDGMFNMRVARAGLD SVEHESKLVW QA+GQPS G+YCIRAIFMEGRQSECFWA ETVPNLLAALN L +E
Sbjct:    9 PPPLTARS---------ALRRRAACSRVAWRACAASPRDDVLAAIREGQQLRDRLDELSESRRAQAERTNSALEQMANKISEINAKLRADAGMPPVAESPVTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASAASDEPYMDPKNFGYESTAGWQVLQASDELPENEGNLQFRIECDMHGCSLIQVKGDAPPGPGVRQNYVQSGARFRVGYDPEAPKSFCAMVGNDQWLIALSYDEIRHFKRLCLSLQKRMDRIGRGEEDPPVKKPAVRRSGDGMFNMRVARAGLDFSVEHESKLVWVQAIGQPSLGQYCIRAIFMEGRQSECFWARETVPNLLAALNNLGVE 344          
BLAST of Gcaud1443.t1 vs. uniprot
Match: R7Q859_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q859_CHOCR)

HSP 1 Score: 390 bits (1002), Expect = 6.460e-134
Identity = 198/258 (76.74%), Postives = 222/258 (86.05%), Query Frame = 0
Query:   81 MASQISAITAKLRADAGMPPVADPXXXXXXXXXXXXXXXXXXXXXXXXASDEPYMDPKNFGYESTAGWQVLEASDDLPENER-NLRFRIECDMHGCSLIEVKGDVPPGPGVRQKFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALGYDEIRHFKRLCLSLQKRMDRIGRGEEDPPIKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWTQALGQPSPGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLRIE 337
            M+ Q++ I AKLRADAGMPPVA+P           XXXXXXXXXXXXX   EPYMDP NFGYESTAGWQVL A+D+LPEN   N+ FRIECDM+GCS+IEVKGD PPGPGVRQ+FI +G GFRVG+DPEAPK FC MVGNDQWL+AL YDEIRHFKRLCLSLQK+MDRIGRGEEDPP+KKPAVRRSGDGMFNMR+ARAGLDCSVE ESKLVW QA+GQP  G+YCIRAIFMEGRQSE FWA +TVP++L++LNKL +E
Sbjct:    1 MSDQLAKIVAKLRADAGMPPVAEPPSDSAAAPEAPXXXXXXXXXXXXXXXXEPYMDPSNFGYESTAGWQVLSATDELPENASGNVEFRIECDMNGCSIIEVKGDAPPGPGVRQRFIHAGPGFRVGYDPEAPKGFCGMVGNDQWLLALNYDEIRHFKRLCLSLQKKMDRIGRGEEDPPMKKPAVRRSGDGMFNMRIARAGLDCSVELESKLVWVQAIGQPVSGQYCIRAIFMEGRQSEGFWAPDTVPSMLSSLNKLGVE 258          
BLAST of Gcaud1443.t1 vs. uniprot
Match: A0A1X6NI03_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NI03_PORUM)

HSP 1 Score: 214 bits (545), Expect = 2.110e-65
Identity = 110/210 (52.38%), Postives = 139/210 (66.19%), Query Frame = 0
Query:  135 MDPKNFGYESTAGWQVLEASDDLPENERN--LRFRIECDMHGCSLI-EVKGDVPPGPGVRQKFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALGYDEIRHFKRLCLSLQKRMDRIGRGEEDPPIKKPA--VRRSGDGMFNMRVA--RAGLDCSVEHESKLVWTQALGQPSPGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLRIE 337
            MDP  FG +STAGWQ L++  DLP       + FRIECD HGCSLI +     P G GVR++F+  G G+RVG+DPE+P+S+C MVG  +WL+AL  DE+ H KRL L+L+K+M RI  GEE+PP K      RRSGDGMF+ RV+     +  SVE ESKL+W QA G P    Y IR I ME RQ+E  W +  VP LL+A+ KLR+E
Sbjct:    1 MDPSTFGMDSTAGWQTLQSESDLPSGSDGDAVSFRIECDAHGCSLIMQPDAGEPTGAGVRKQFVMEGDGYRVGYDPESPRSYCGMVGTSEWLLALDRDEVGHLKRLLLALKKKMRRIASGEEEPPKKGNIGHARRSGDGMFHERVSSWEGDIPVSVELESKLMWVQAFGVPEA--YGIRVILMERRQAEGVWPAAVVPGLLSAVGKLRVE 208          
BLAST of Gcaud1443.t1 vs. uniprot
Match: A0A7J7IJL2_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJL2_9RHOD)

HSP 1 Score: 122 bits (305), Expect = 5.770e-28
Identity = 72/189 (38.10%), Postives = 100/189 (52.91%), Query Frame = 0
Query:  153 ASDDLPENERNLRFRIECDMHGCSLIEVKGDVPPGP-GVRQKFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALGYDEIRHFKRLCLSLQKRMDRIGRGEEDPPIKKPAVRRSGDGMFNMRVARAGLDCS-----VEHESKLVWTQALGQPSPGKYCIRAIFMEG-RQSECFWASETVPNLLAALNKL 334
            A++   +N    R  +ECD++GC  + ++ +      GVR K + SG GFRVG+DP AP S CA+VG+D W +AL  +E RHF+RL  +LQ +M  I  G    P       RSGDG    R++    D        E ES L+W  A G P    Y +R I + G R  E  W ++ VP+L A L +L
Sbjct:  199 ATEPPQQNNEPARMIVECDINGCCSLIIRDESNANVRGVRPKHVFSGPGFRVGYDPAAPPSDCALVGDDHWTIALSREEFRHFRRLAQALQYKMGDITAGRVSKPAASGVPVRSGDGFCKERLSWNTADGESSKIVAEFESSLMWLGASGNPF--SYDLRLILLGGNRIVEGVWPAQVVPSLFAKLMEL 385          
BLAST of Gcaud1443.t1 vs. uniprot
Match: M1V5V2_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V5V2_CYAM1)

HSP 1 Score: 117 bits (294), Expect = 2.170e-26
Identity = 73/188 (38.83%), Postives = 102/188 (54.26%), Query Frame = 0
Query:  156 DLP-ENERNLRFRIECDMHGC-SLIEVKGDVPPGPGVRQKFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALGYDEIRHFKRLCLSLQKRMDRIGRGEEDPPIKKPAVRRSGDGMFNMRVARAGLDCS-----VEHESKLVWTQALGQPSPGKYCIRAIFMEGRQS--ECFWASETVPNLLAALNKL 334
            +LP +     +  +ECD++GC SLI   GD     GVR +++ SG GF++G DP AP S CA+VG+D W +AL  +E RHF+RL  +LQ +M  I  G    P  +     SGDG    R++    D        E ES L+W  A G  SP  Y +R I + GR+   E  W ++ VP+L A L +L
Sbjct:  205 ELPIQKSEPAQMIVECDINGCCSLIVRDGDHSAPRGVRPQYVFSGPGFKIGHDPAAPPSDCALVGDDHWTIALSREEFRHFRRLVQALQYKMGDIMNGVASKPTAQGVPVHSGDGFCKERISWNASDGESSRIVAEFESSLMWLGASG--SPYSYDLRLILL-GRERIVEGLWPAQVVPSLCAKLMEL 389          
BLAST of Gcaud1443.t1 vs. uniprot
Match: UPI0015BC616A (DUF1818 family protein n=1 Tax=Nostoc sp. TCL26-01 TaxID=2576904 RepID=UPI0015BC616A)

HSP 1 Score: 67.4 bits (163), Expect = 2.580e-10
Identity = 44/145 (30.34%), Postives = 70/145 (48.28%), Query Frame = 0
Query:  192 QKFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALGYDEIRHFKRLCLSLQKRMDRIGRGEEDPPIKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWTQALGQPSPGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLRI 336
            ++ I+SG G+R+G++P APK F  +VG D W + L   E+  F RL   L   M ++                + + M   ++A        E ES L+W +  G P   +Y +R I   GR +E  W++  VP+LL A   L++
Sbjct:    2 ERLIKSGAGWRIGWNPNAPK-FKGLVGTDDWAIELTEAELDDFCRLLAKLANTMQQL----------------TSELMDEEKIA-------CEAESDLLWMEVAGYPH--EYNLRFILNTGRGAEGAWSAAAVPSLLQAAETLKV 120          
BLAST of Gcaud1443.t1 vs. uniprot
Match: UPI000A620B2C (DUF1818 family protein n=1 Tax=Sphaerospermopsis aphanizomenoides TaxID=459663 RepID=UPI000A620B2C)

HSP 1 Score: 66.6 bits (161), Expect = 4.860e-10
Identity = 47/145 (32.41%), Postives = 70/145 (48.28%), Query Frame = 0
Query:  192 QKFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALGYDEIRHFKRLCLSLQKRMDRIGRGEEDPPIKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWTQALGQPSPGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLRI 336
            +K I+SG G+R+G++P+APK F  +VG D W + L   E+  F RL   L   M  +                + + M   ++A        E ES L+W +A G P    Y +R I   GR +E  W ++TVP LL A   L++
Sbjct:    2 EKVIKSGTGWRIGWNPDAPK-FKGLVGTDNWAIELTELELDDFCRLLNQLADTMKHL----------------ATELMDEEKIA-------CEAESDLLWMEAEGYPH--SYSLRFILNTGRCAEGEWNADTVPGLLQAAATLKV 120          
BLAST of Gcaud1443.t1 vs. uniprot
Match: A0A846FKS9_9CYAN (DUF1818 family protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FKS9_9CYAN)

HSP 1 Score: 64.3 bits (155), Expect = 3.260e-9
Identity = 44/142 (30.99%), Postives = 67/142 (47.18%), Query Frame = 0
Query:  195 IQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALGYDEIRHFKRLCLSLQKRMDRIGRGEEDPPIKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWTQALGQPSPGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLRI 336
            ++SG G+R+G+D EAP+    ++GND W + L   E+    RL   L K M +                     M +  +    + C  E ES L+W +  G P    Y +R I + GR+ E  W +ETVP LL A+  L++
Sbjct:    5 VKSGPGWRLGWDAEAPECK-GLIGNDTWSLELTEAELEDLCRLATQLAKTMAQ---------------------MASQLMEAEKITC--EAESDLIWLEVEGFPDA--YGLRFILLTGRRGEGGWPAETVPELLQAMQVLKV 120          
BLAST of Gcaud1443.t1 vs. uniprot
Match: K9VEA9_9CYAN (Uncharacterized protein n=5 Tax=Cyanobacteria TaxID=1117 RepID=K9VEA9_9CYAN)

HSP 1 Score: 62.4 bits (150), Expect = 1.620e-8
Identity = 42/145 (28.97%), Postives = 69/145 (47.59%), Query Frame = 0
Query:  192 QKFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALGYDEIRHFKRLCLSLQKRMDRIGRGEEDPPIKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWTQALGQPSPGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLRI 336
            ++ I++GVG+R+G++PEA + F  +V  D W + L   E+  F RL   L   M +I                + + M   ++A       +E ES L+W Q  G P    Y ++ I   GR+ E FW +  VP+L+     L++
Sbjct:    3 ERVIKTGVGWRLGWNPEA-QEFQGLVAGDGWAIELTEAELNDFCRLLGQLAGTMSQI----------------ASELMDEEKIA-------IEAESDLLWVQVEGYPEA--YSVQLILNAGRRCEGFWPAAAVPSLVQTAKVLKV 121          
BLAST of Gcaud1443.t1 vs. uniprot
Match: A0A1Z4SFL6_9NOSO (Uncharacterized protein n=3 Tax=Nostocaceae TaxID=1162 RepID=A0A1Z4SFL6_9NOSO)

HSP 1 Score: 62.0 bits (149), Expect = 2.170e-8
Identity = 43/145 (29.66%), Postives = 67/145 (46.21%), Query Frame = 0
Query:  192 QKFIQSGVGFRVGFDPEAPKSFCAMVGNDQWLVALGYDEIRHFKRLCLSLQKRMDRIGRGEEDPPIKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWTQALGQPSPGKYCIRAIFMEGRQSECFWASETVPNLLAALNKLRI 336
            ++ I+SG G+R+G++P APK F  ++G D W V L   E+  F +L   L   M ++                  + M   ++A        E ES L+W +  G P   +Y +R I   GR +E  W   +VP LL A   L++
Sbjct:    2 ERLIKSGSGWRIGWNPNAPK-FKGLIGTDDWAVELTEAELNDFCQLLAQLADTMKQL----------------KEELMDEEKIA-------CEAESDLIWMEVEGYPH--EYSLRFILNTGRCAEGKWNPASVPGLLQATGMLKV 120          
The following BLAST results are available for this feature:
BLAST of Gcaud1443.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3IGM0_9FLOR2.500e-16173.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q859_CHOCR6.460e-13476.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NI03_PORUM2.110e-6552.38Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7J7IJL2_9RHOD5.770e-2838.10Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1V5V2_CYAM12.170e-2638.83Uncharacterized protein n=2 Tax=cellular organisms... [more]
UPI0015BC616A2.580e-1030.34DUF1818 family protein n=1 Tax=Nostoc sp. TCL26-01... [more]
UPI000A620B2C4.860e-1032.41DUF1818 family protein n=1 Tax=Sphaerospermopsis a... [more]
A0A846FKS9_9CYAN3.260e-930.99DUF1818 family protein n=1 Tax=Cyanothece sp. SIO1... [more]
K9VEA9_9CYAN1.620e-828.97Uncharacterized protein n=5 Tax=Cyanobacteria TaxI... [more]
A0A1Z4SFL6_9NOSO2.170e-829.66Uncharacterized protein n=3 Tax=Nostocaceae TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014947Protein of unknown function DUF1818PFAMPF08848DUF1818coord: 197..248
e-value: 1.2E-6
score: 28.6
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10Transcriptional Coactivator Pc4; Chain Acoord: 190..336
e-value: 2.0E-24
score: 87.8
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 194..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1021_length_14946_cov_4.146752contigNODE_1021_length_14946_cov_4.146752:2193..3206 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1443.t1Gcaud1443.t1Gracilaria caudata M_176_S67 malemRNANODE_1021_length_14946_cov_4.146752 2193..3206 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1443.t1 ID=Gcaud1443.t1|Name=Gcaud1443.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=338bp
MANAFLPPAPITSRSRYVTPALCQSVRLAARSTRVRWSCCSSVDPVEAAV
AEGETLRRQLEDISESRREQAERTNEALMKMASQISAITAKLRADAGMPP
VADPPPASAAVDSSAAAPPVVSDDDASAASDEPYMDPKNFGYESTAGWQV
LEASDDLPENERNLRFRIECDMHGCSLIEVKGDVPPGPGVRQKFIQSGVG
FRVGFDPEAPKSFCAMVGNDQWLVALGYDEIRHFKRLCLSLQKRMDRIGR
GEEDPPIKKPAVRRSGDGMFNMRVARAGLDCSVEHESKLVWTQALGQPSP
GKYCIRAIFMEGRQSECFWASETVPNLLAALNKLRIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014947DUF1818
IPR009044ssDNA-bd_transcriptional_reg