Gcaud1441.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1441.t1
Unique NameGcaud1441.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length231
Homology
[Close]
BLAST of Gcaud1441.t1 vs. uniprot
Match: R7Q873_CHOCR (Methyltransf_11 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q873_CHOCR)

HSP 1 Score: 116 bits (291), Expect = 1.140e-27
Identity = 74/203 (36.45%), Postives = 110/203 (54.19%), Query Frame = 0 
Query:   35 AVDADALHIRRLRERVSRLETD---------GRLVDAIVATLPCGELFGEQSVAAVLLSEVLPFLRVGEPAQLFRDVYKWLLPGGSVVAT---SMSPFALDNGRGKHLKYNGGISYERALELFNNAPD-DIVQLAPGLVELSAEWKGLGVFPDKMYIMTREEVRSFAEMAGFEIETCEYCASAKYKMENTAGNESVILVARKP 224
            AVD +  HI  LR R                G+LV A VATLP   +  E+SVA VLLSEV+ F+R G+P  +F D+++WL PGG +V T   S  P   +       K NG  + E A+++ + A   ++V+ AP  +EL  +          +Y+M+ +EV + A+ AGF++E C Y  + KY  + T   E+V+LVA+KP
Sbjct:   87 AVDMEQAHIDDLRVRADDYAKSVVVQDNTGPGKLVRATVATLPDPSVCAEESVAGVLLSEVIHFMRPGQPQVVFSDIFRWLEPGGRLVVTTAASQGPKVAEFVNKAGFKLNGERNVEEAIDMISTASGPELVKAAPTFLELPQDSPMRKFVCGVLYLMSTKEVETMAKEAGFKVERCRYVTTGKYP-DKTIKGETVLLVAKKP 288
The following BLAST results are available for this feature:
BLAST of Gcaud1441.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q873_CHOCR1.140e-2736.45Methyltransf_11 domain-containing protein n=1 Tax=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 14..225
e-value: 3.4E-13
score: 51.5
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 16..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1627_length_9391_cov_4.808495contigNODE_1627_length_9391_cov_4.808495:7190..7882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1441.t1Gcaud1441.t1Gracilaria caudata M_176_S67 malemRNANODE_1627_length_9391_cov_4.808495 7190..7882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1441.t1 ID=Gcaud1441.t1|Name=Gcaud1441.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=231bp
MALCTAPLGKAHRGFGRVLRRTHHSCAEARTRCDAVDADALHIRRLRERV
SRLETDGRLVDAIVATLPCGELFGEQSVAAVLLSEVLPFLRVGEPAQLFR
DVYKWLLPGGSVVATSMSPFALDNGRGKHLKYNGGISYERALELFNNAPD
DIVQLAPGLVELSAEWKGLGVFPDKMYIMTREEVRSFAEMAGFEIETCEY
CASAKYKMENTAGNESVILVARKPLDLISQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases