Gcaud1437.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1437.t1
Unique NameGcaud1437.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length202
Homology
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BLAST of Gcaud1437.t1 vs. uniprot
Match: A0A2V3ITC1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITC1_9FLOR)

HSP 1 Score: 236 bits (603), Expect = 2.740e-76
Identity = 127/196 (64.80%), Postives = 148/196 (75.51%), Query Frame = 0 
Query:    7 SFVQSSALSPFQ--TRHARLVAPEKQRTAFHSVPKAPRRRPQMQIPPPSYEHPPLTPEEKGPPGYKWNPDFPGTLKPGLEPDNYPLEDVLNSGVYERMEYTEMDIDERDPRIFEPEEDLLEWLAKQGRLIPRGASDDEFETEAERQISGITEEDLDFGDDDSRMIAYYSRQGEGTGAGAGQDFGGFSEPAGDTGFD 200
            +FV ++A SP +  ++   L    +    F++ P+  R R +MQIPP   E PPLT EE+GPP YKW+P+FPGT+KPG   DN+PL  VL S VYERMEY E+D DERDP IFEP+EDLLEWLA+ GRLIPRGASDDEFE EAERQISGITEEDLDF DDDS+MIAYYSRQGEGT  G+  DFGGFSE   D GFD
Sbjct:   11 AFVFTAARSPVRMLSKAPHLSPTRRNLFCFNNRPR--RHRLRMQIPPFGQEEPPLTKEERGPPDYKWDPNFPGTMKPGQVEDNFPLRKVLESDVYERMEYQELDADERDPHIFEPDEDLLEWLARHGRLIPRGASDDEFEMEAERQISGITEEDLDFADDDSQMIAYYSRQGEGTATGSSPDFGGFSESYSDGGFD 204
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BLAST of Gcaud1437.t1 vs. uniprot
Match: A0A1X6NMM2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMM2_PORUM)

HSP 1 Score: 110 bits (276), Expect = 5.320e-27
Identity = 60/129 (46.51%), Postives = 85/129 (65.89%), Query Frame = 0 
Query:   47 MQIPPPSYEHPPLTPEEKGPPGYKWNPDFPGTLKPGLEPDNYPLEDVLNSGVYERMEYTEMDIDERDPRIFEPEEDLLEWLAKQGRLIPRGASDDEFETEAERQISGITEEDLDFG-DDDSRMIAYYSR 174
            MQ+PP +   PPLTPE   P  Y W+PDFPGTLKPGL PDN+P+  VL SGVY+ M++ E++ D+RD  +    +DLLE++A  GRL+   A  +  E  A  ++ G   E+LDFG D++ +++  YSR
Sbjct:   46 MQLPPSTAFQPPLTPEMLPPKNYTWSPDFPGTLKPGLVPDNFPISQVLESGVYDNMKFQELEADDRDGDMTPLNDDLLEFMAVNGRLLDEEAEAETGEGGARGRLVG---EELDFGGDEEDKVLQLYSR 171
The following BLAST results are available for this feature:
BLAST of Gcaud1437.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITC1_9FLOR2.740e-7664.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NMM2_PORUM5.320e-2746.51Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021481Protein of unknown function DUF3134PFAMPF11332DUF3134coord: 119..166
e-value: 4.1E-8
score: 33.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1082_length_14096_cov_4.305677contigNODE_1082_length_14096_cov_4.305677:9838..10443 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1437.t1Gcaud1437.t1Gracilaria caudata M_176_S67 malemRNANODE_1082_length_14096_cov_4.305677 9838..10443 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1437.t1 ID=Gcaud1437.t1|Name=Gcaud1437.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=202bp
MTLPPPSFVQSSALSPFQTRHARLVAPEKQRTAFHSVPKAPRRRPQMQIP
PPSYEHPPLTPEEKGPPGYKWNPDFPGTLKPGLEPDNYPLEDVLNSGVYE
RMEYTEMDIDERDPRIFEPEEDLLEWLAKQGRLIPRGASDDEFETEAERQ
ISGITEEDLDFGDDDSRMIAYYSRQGEGTGAGAGQDFGGFSEPAGDTGFD
I*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021481DUF3134