Gcaud1430.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1430.t1
Unique NameGcaud1430.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length319
Homology
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BLAST of Gcaud1430.t1 vs. uniprot
Match: A0A2V3IR79_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR79_9FLOR)

HSP 1 Score: 272 bits (695), Expect = 1.470e-86
Identity = 159/308 (51.62%), Postives = 219/308 (71.10%), Query Frame = 0 
Query:    8 DPTSSLAAALHSGSVYTALSHLDALNALPSAHTSAAVPHHKLLKLLRCVLPLLLLPRALARYDDASLRAQLLPLVASVFANARGVRAALPAVPAAQLRAGVAKAVRRLSHAHVDDASAALAQAAATISEQLCDAWGTMLGASAXXXXXXLASDLLAYTSRMRSCMHSTNKLDVQVLSAHRVAIDVHHAAARLAHSAVQLDIGARQSVPSYQECRARELIARGSAMSCKLQTLCAQIRSETYTTESVRRLRLIATEVCERQQQVERELRVERGRLAEYRALGVQFERIVREVLRTRQMLEQKEWSRKEL 315
            +P+++L  +L SG VYTALS L+ L A+P  HT   +    LLK  R +LP+LLLPRAL  YD  SLRA  +PL++++ A+ + +  ALP   AAQLR  + K  +RLS + V+DASAALAQ AATI EQ+ + WG ++ ++       LASDLL++ S++RS +    +LD  +++AHR+AI ++HAAAR+A +AV++D  ARQ  PS+   RA EL+ARG+ +  KL  L AQI+ E YT ESV+ LR++A EV +R+Q+VERE+ VE GRL+EYR+LG  FE IVREVL+TR+ LEQKEWSRKEL
Sbjct:   24 NPSTALGTSLESGYVYTALSQLEELGAVPPTHTPTTMADEALLKAHRTLLPILLLPRALNDYDK-SLRAAFVPLLSALHASVKHLPKALPHASAAQLRTRLLKYTQRLSDSQVEDASAALAQGAATIYEQINETWGALVPSTTSSCSSTLASDLLSHASQIRSNVEKVQRLDRHIVNAHRIAISMYHAAARIAQTAVEIDTSARQRHPSHDHTRANELVARGAMIRAKLNMLHAQIQREIYTPESVKALRVVAAEVSQREQEVEREIEVEGGRLSEYRSLGSDFENIVREVLKTREKLEQKEWSRKEL 330
The following BLAST results are available for this feature:
BLAST of Gcaud1430.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR79_9FLOR1.470e-8651.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029327HAUS augmin-like complex subunit 4PFAMPF14735HAUS4coord: 218..315
e-value: 5.8E-17
score: 62.2
IPR029327HAUS augmin-like complex subunit 4PANTHERPTHR16219AUGMIN SUBUNIT 4 FAMILY MEMBERcoord: 216..311
NoneNo IPR availablePANTHERPTHR16219:SF1HAUS AUGMIN-LIKE COMPLEX SUBUNIT 4coord: 216..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3343_length_3613_cov_3.731687contigNODE_3343_length_3613_cov_3.731687:234..1190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1430.t1Gcaud1430.t1Gracilaria caudata M_176_S67 malemRNANODE_3343_length_3613_cov_3.731687 234..1190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1430.t1 ID=Gcaud1430.t1|Name=Gcaud1430.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=319bp
MAMASQHDPTSSLAAALHSGSVYTALSHLDALNALPSAHTSAAVPHHKLL
KLLRCVLPLLLLPRALARYDDASLRAQLLPLVASVFANARGVRAALPAVP
AAQLRAGVAKAVRRLSHAHVDDASAALAQAAATISEQLCDAWGTMLGASA
GASASELASDLLAYTSRMRSCMHSTNKLDVQVLSAHRVAIDVHHAAARLA
HSAVQLDIGARQSVPSYQECRARELIARGSAMSCKLQTLCAQIRSETYTT
ESVRRLRLIATEVCERQQQVERELRVERGRLAEYRALGVQFERIVREVLR
TRQMLEQKEWSRKELALG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029327HAUS4