Gcaud1423.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1423.t1
Unique NameGcaud1423.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length187
Homology
BLAST of Gcaud1423.t1 vs. uniprot
Match: A0A2V3IWN2_9FLOR (Tubulin alpha chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWN2_9FLOR)

HSP 1 Score: 292 bits (747), Expect = 5.140e-95
Identity = 156/208 (75.00%), Postives = 170/208 (81.73%), Query Frame = 0
Query:    1 LLEHLDLGVALDNEAIYDICRRSLSIARPTYSNLNRLIAQVVSSLTASLLFDGAWNVDIKKFQTGLVPSPRIHFMLSAYAPIMAKEKAHHEKSSVAEITLVVFQPNSA----------------------TFKRDVNAAVASIKSKRSIQFVEWSPTGMKIGINSQPPTLVKDDDPAESKISVCSIADCTAIAEMFAPINATFDLMFA 186
            LLEHLD+GV LDNEAIYDICRRSL IARPTYSNLNRLIAQVVSSLTASL FDGA NVDI +FQT LVP PRIHFMLSAYAPI++KEKA+HE+SSV+EIT  VF+PN+A                       F RDVNAAVASIK+KRSIQFVEWSPTGMKIGINSQPPTLVK+DD AESK SVCSIA+ TAIAE+FA INA FDLMF+
Sbjct:  194 LLEHLDVGVVLDNEAIYDICRRSLGIARPTYSNLNRLIAQVVSSLTASLRFDGALNVDINEFQTNLVPYPRIHFMLSAYAPIVSKEKAYHEESSVSEITSAVFEPNAAFAKCDPRSGRYIAVSLNYRGDDIFPRDVNAAVASIKTKRSIQFVEWSPTGMKIGINSQPPTLVKNDDLAESKRSVCSIANSTAIAEVFARINAKFDLMFS 401          
BLAST of Gcaud1423.t1 vs. uniprot
Match: F1B895_9FLOR (Tubulin alpha chain (Fragment) n=1 Tax=Furcellaria lumbricalis TaxID=28020 RepID=F1B895_9FLOR)

HSP 1 Score: 271 bits (693), Expect = 1.580e-88
Identity = 144/208 (69.23%), Postives = 164/208 (78.85%), Query Frame = 0
Query:    1 LLEHLDLGVALDNEAIYDICRRSLSIARPTYSNLNRLIAQVVSSLTASLLFDGAWNVDIKKFQTGLVPSPRIHFMLSAYAPIMAKEKAHHEKSSVAEITLVVFQPNSA----------------------TFKRDVNAAVASIKSKRSIQFVEWSPTGMKIGINSQPPTLVKDDDPAESKISVCSIADCTAIAEMFAPINATFDLMFA 186
            LLEHLD+GV LDNEAIYDICRRSL I RPTYSNLNRLIAQVVSSLTASL FDGA NVDI +FQT LVP PRIHFMLSAYAPI++ EKA HE+SSVAEIT  VF+PN+A                       F +DVNAAVASIK+K+SIQFV+WSPTGMKIGINSQPPT +  DD A+++ SVCSIA+ TAIAE+FA ++A FDLM+A
Sbjct:   70 LLEHLDVGVVLDNEAIYDICRRSLGIIRPTYSNLNRLIAQVVSSLTASLRFDGALNVDINEFQTNLVPYPRIHFMLSAYAPIVSAEKAFHEESSVAEITSSVFEPNAAFAKCDPRSGRYIAVSLNYRGADIFPKDVNAAVASIKTKKSIQFVDWSPTGMKIGINSQPPTQIPTDDLAKAQRSVCSIANSTAIAEVFARVDAKFDLMYA 277          
BLAST of Gcaud1423.t1 vs. uniprot
Match: R7QEG0_CHOCR (Tubulin alpha chain n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEG0_CHOCR)

HSP 1 Score: 259 bits (663), Expect = 2.110e-82
Identity = 135/208 (64.90%), Postives = 162/208 (77.88%), Query Frame = 0
Query:    1 LLEHLDLGVALDNEAIYDICRRSLSIARPTYSNLNRLIAQVVSSLTASLLFDGAWNVDIKKFQTGLVPSPRIHFMLSAYAPIMAKEKAHHEKSSVAEITLVVFQPNSA----------------------TFKRDVNAAVASIKSKRSIQFVEWSPTGMKIGINSQPPTLVKDDDPAESKISVCSIADCTAIAEMFAPINATFDLMFA 186
            LLEHLD+GV LDNEAIYDICRRSL I RPTYSNLNRLIAQVVSSLTASL FDG  NVDI +FQT LVP PRIHFMLSAYAPI++ EKA+HE+SSVAEIT  VF+PN++                       F +DVN AV ++K+K+S+QFVEWSPTG+KIGINSQ PT + +D+ A+++ SVCS+A+ TAIAE+FA I+A FDLM+A
Sbjct:  194 LLEHLDVGVVLDNEAIYDICRRSLGIMRPTYSNLNRLIAQVVSSLTASLRFDGTLNVDINEFQTNLVPYPRIHFMLSAYAPIVSSEKAYHEESSVAEITNSVFEPNASFAKCDPRSGRYIAVSLNYRGLDIFPKDVNVAVGTVKTKKSVQFVEWSPTGVKIGINSQQPTKIPNDELAKAQRSVCSMANSTAIAEVFARIDAKFDLMYA 401          
BLAST of Gcaud1423.t1 vs. uniprot
Match: R7Q7R7_CHOCR (Tubulin alpha chain n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7R7_CHOCR)

HSP 1 Score: 259 bits (662), Expect = 2.980e-82
Identity = 134/207 (64.73%), Postives = 162/207 (78.26%), Query Frame = 0
Query:    1 LLEHLDLGVALDNEAIYDICRRSLSIARPTYSNLNRLIAQVVSSLTASLLFDGAWNVDIKKFQTGLVPSPRIHFMLSAYAPIMAKEKAHHEKSSVAEITLVVFQPNSA----------------------TFKRDVNAAVASIKSKRSIQFVEWSPTGMKIGINSQPPTLVKDDDPAESKISVCSIADCTAIAEMFAPINATFDLMF 185
            LLEHLD+GV LDNEAIYDICRRSL I RP+YSNLNRLIAQVVSSLTASL FDG  NVDI +FQT LVP PRIHFMLSAYAPI++ E+A+HE+SSVAEIT  VF+PN++                       F +DVNAAVA++K+++S+QFVEWSPTG+K+GINS+PPT V DD  A++  +VCSIA+ TAIAE+FA +NA FDLM+
Sbjct:  194 LLEHLDVGVVLDNEAIYDICRRSLGIKRPSYSNLNRLIAQVVSSLTASLRFDGTLNVDINEFQTNLVPYPRIHFMLSAYAPIVSAEQAYHEESSVAEITNSVFEPNASFAKCDPRSGRYIAVSLTYRGADIFPKDVNAAVAAVKTRKSVQFVEWSPTGVKLGINSRPPTKVPDDPLAKTHRAVCSIANSTAIAEVFARVNAKFDLMY 400          
BLAST of Gcaud1423.t1 vs. uniprot
Match: A0A2P2I7C3_9CRUS (Tubulin alpha chain (Fragment) n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2P2I7C3_9CRUS)

HSP 1 Score: 237 bits (605), Expect = 4.290e-75
Identity = 124/207 (59.90%), Postives = 152/207 (73.43%), Query Frame = 0
Query:    1 LLEHLDLGVALDNEAIYDICRRSLSIARPTYSNLNRLIAQVVSSLTASLLFDGAWNVDIKKFQTGLVPSPRIHFMLSAYAPIMAKEKAHHEKSSVAEITLVVFQPNSATFK---------------------RDVNAAVASIKSKRSIQFVEWSPTGMKIGINSQPPTLVKDDDPAESKISVCSIADCTAIAEMFAPINATFDLMFA 186
            LLEH D+ V LDNEAIYDICRRSL I RPTY+NLNRLIAQV+SSLTASL FDGA NVDI +FQT LVP PRIHFMLS+YAP+++ EKA+HE+ SV EIT   F+P S   K                     +DVNAAVA+IK+KR+IQFV+W PTG K+GIN QPPT+V   D A+ + +VC +A+ TAIAE+F+ I+  FD+M+A
Sbjct:   74 LLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVGEITSSAFEPASMMCKCDPRHGKYMAACMMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMVANSTAIAEVFSRIDHKFDIMYA 280          
BLAST of Gcaud1423.t1 vs. uniprot
Match: A0A067ZTY0_9EUKA (Tubulin alpha chain (Fragment) n=5 Tax=Psalteriomonadidae TaxID=1129782 RepID=A0A067ZTY0_9EUKA)

HSP 1 Score: 238 bits (608), Expect = 5.040e-75
Identity = 124/207 (59.90%), Postives = 154/207 (74.40%), Query Frame = 0
Query:    1 LLEHLDLGVALDNEAIYDICRRSLSIARPTYSNLNRLIAQVVSSLTASLLFDGAWNVDIKKFQTGLVPSPRIHFMLSAYAPIMAKEKAHHEKSSVAEITLVVFQPNSATFK---------------------RDVNAAVASIKSKRSIQFVEWSPTGMKIGINSQPPTLVKDDDPAESKISVCSIADCTAIAEMFAPINATFDLMFA 186
            LLEH D+ V LDNEAIYDICRRSL I RPTY+NLNRL+AQV+SSLTASL FDGA NVDI +FQT L P PRIHFMLS+YAP+++ EKA+HE+ SVAEIT   F+P S   +                     +DVNA+VA+IK+KR+IQFV+WSPTG K GIN QPPT+V   D A+++ +VC I++ TAIAE+F+ I+A FDLM+A
Sbjct:  165 LLEHTDVAVMLDNEAIYDICRRSLDIQRPTYTNLNRLVAQVISSLTASLRFDGALNVDITEFQTNLAPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMARCDPRHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKARRAVCMISNSTAIAEVFSRIDAKFDLMYA 371          
BLAST of Gcaud1423.t1 vs. uniprot
Match: A0A4S8IKZ4_MUSBA (Uncharacterized protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8IKZ4_MUSBA)

HSP 1 Score: 237 bits (605), Expect = 1.100e-74
Identity = 118/189 (62.43%), Postives = 152/189 (80.42%), Query Frame = 0
Query:    1 LLEHLDLGVALDNEAIYDICRRSLSIARPTYSNLNRLIAQVVSSLTASLLFDGAWNVDIKKFQTGLVPSPRIHFMLSAYAPIMAKEKAHHEKSSVAEITLVVFQPNSATFK---RDVNAAVASIKSKRSIQFVEWSPTGMKIGINSQPPTLVKDDDPAESKISVCSIADCTAIAEMFAPINATFDLMFA 186
            LLEH D+ V LDNEAIYDIC+RSL I RP+Y+NLNRL++QV+SSLTASL FDGA NVD+ +FQT LVP PRIHFM+S+YAP+++ EKA+HE+ SVAEIT   F+P+S   K    DVNAAVA+IK+KR+IQFV+W PTG K GIN QPPT+V   D A+ + +VC I++ T++AE+F+ I+  FDLM+A
Sbjct:  125 LLEHTDVAVLLDNEAIYDICKRSLDIERPSYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMISSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCVTHDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYA 313          
BLAST of Gcaud1423.t1 vs. uniprot
Match: C5IXZ9_9EUKA (Tubulin alpha chain (Fragment) n=2 Tax=Bodomorpha minima TaxID=188950 RepID=C5IXZ9_9EUKA)

HSP 1 Score: 238 bits (606), Expect = 1.510e-74
Identity = 125/207 (60.39%), Postives = 153/207 (73.91%), Query Frame = 0
Query:    1 LLEHLDLGVALDNEAIYDICRRSLSIARPTYSNLNRLIAQVVSSLTASLLFDGAWNVDIKKFQTGLVPSPRIHFMLSAYAPIMAKEKAHHEKSSVAEITLVVFQPNSATFK---------------------RDVNAAVASIKSKRSIQFVEWSPTGMKIGINSQPPTLVKDDDPAESKISVCSIADCTAIAEMFAPINATFDLMFA 186
            LLEH D+ V LDNEA+YDICRRSL I RPTY+NLNRLIAQV+SSLTASL FDGA NVDI +FQT LVP PRIHFMLS+YAP+++ EKA+HE+ SVAEIT   F+P+S   K                     +DVNAAVA+IK+KR+IQFV+W PTG K GIN QPPT+V   D A+ + +VC I++ TAIAE+F+ I+  FDLM+A
Sbjct:  178 LLEHTDVAVMLDNEAVYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCMMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYA 384          
BLAST of Gcaud1423.t1 vs. uniprot
Match: O96412_9EUKA (Tubulin alpha chain (Fragment) n=4 Tax=Sar TaxID=2698737 RepID=O96412_9EUKA)

HSP 1 Score: 237 bits (605), Expect = 1.960e-74
Identity = 124/207 (59.90%), Postives = 153/207 (73.91%), Query Frame = 0
Query:    1 LLEHLDLGVALDNEAIYDICRRSLSIARPTYSNLNRLIAQVVSSLTASLLFDGAWNVDIKKFQTGLVPSPRIHFMLSAYAPIMAKEKAHHEKSSVAEITLVVFQPNSATFK---------------------RDVNAAVASIKSKRSIQFVEWSPTGMKIGINSQPPTLVKDDDPAESKISVCSIADCTAIAEMFAPINATFDLMFA 186
            LLEH D+ V LDNEA+YDICRRSL I RPTY+NLNRLIAQV+SSLTASL FDGA NVDI +FQT LVP PRIHFMLS+YAP+++ EKA+HE+ SVAE+T   F+P+S   K                     +DVNAAVA+IK+KR+IQFV+W PTG K GIN QPPT+V   D A+ + +VC I++ TAIAE+F+ I+  FDLM+A
Sbjct:  172 LLEHTDVAVMLDNEAVYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEVTNSAFEPSSMMAKCDPRHGKYMACCMMYRGDVVPKDVNAAVATIKTKRNIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYA 378          
BLAST of Gcaud1423.t1 vs. uniprot
Match: Q2MM13_9EUKA (Tubulin alpha chain (Fragment) n=1 Tax=Trimastix marina TaxID=137419 RepID=Q2MM13_9EUKA)

HSP 1 Score: 237 bits (605), Expect = 1.960e-74
Identity = 126/207 (60.87%), Postives = 152/207 (73.43%), Query Frame = 0
Query:    1 LLEHLDLGVALDNEAIYDICRRSLSIARPTYSNLNRLIAQVVSSLTASLLFDGAWNVDIKKFQTGLVPSPRIHFMLSAYAPIMAKEKAHHEKSSVAEITLVVFQPNSATFK---------------------RDVNAAVASIKSKRSIQFVEWSPTGMKIGINSQPPTLVKDDDPAESKISVCSIADCTAIAEMFAPINATFDLMFA 186
            LLEH D+ V LDNEAIYDICRRSL I RPTY+N+NRLIAQV+SSLTASL FDGA NVDI +FQT LVP PRIHFMLS+YAP+++ EKA+HE+ SVAEIT   F+P S   K                     +DVNAAVA+IK+KR+IQFV+W PTG K GIN QPPT+V   D A+ + +VC I++ TAIAE+FA I+  FDLM+A
Sbjct:  172 LLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNINRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFARIDHKFDLMYA 378          
The following BLAST results are available for this feature:
BLAST of Gcaud1423.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWN2_9FLOR5.140e-9575.00Tubulin alpha chain n=1 Tax=Gracilariopsis chorda ... [more]
F1B895_9FLOR1.580e-8869.23Tubulin alpha chain (Fragment) n=1 Tax=Furcellaria... [more]
R7QEG0_CHOCR2.110e-8264.90Tubulin alpha chain n=1 Tax=Chondrus crispus TaxID... [more]
R7Q7R7_CHOCR2.980e-8264.73Tubulin alpha chain n=1 Tax=Chondrus crispus TaxID... [more]
A0A2P2I7C3_9CRUS4.290e-7559.90Tubulin alpha chain (Fragment) n=3 Tax=Eukaryota T... [more]
A0A067ZTY0_9EUKA5.040e-7559.90Tubulin alpha chain (Fragment) n=5 Tax=Psalteriomo... [more]
A0A4S8IKZ4_MUSBA1.100e-7462.43Uncharacterized protein n=1 Tax=Musa balbisiana Ta... [more]
C5IXZ9_9EUKA1.510e-7460.39Tubulin alpha chain (Fragment) n=2 Tax=Bodomorpha ... [more]
O96412_9EUKA1.960e-7459.90Tubulin alpha chain (Fragment) n=4 Tax=Sar TaxID=2... [more]
Q2MM13_9EUKA1.960e-7460.87Tubulin alpha chain (Fragment) n=1 Tax=Trimastix m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002452Alpha tubulinPRINTSPR01162ALPHATUBULINcoord: 21..33
score: 67.23
coord: 171..186
score: 46.07
coord: 133..146
score: 70.17
coord: 81..96
score: 53.15
coord: 107..128
score: 54.81
coord: 146..165
score: 35.42
IPR018316Tubulin/FtsZ, 2-layer sandwich domainSMARTSM00865Tubulin_C_4coord: 55..179
e-value: 5.1E-11
score: 52.6
IPR018316Tubulin/FtsZ, 2-layer sandwich domainPFAMPF03953Tubulin_Ccoord: 70..107
e-value: 3.1E-9
score: 37.0
coord: 112..178
e-value: 1.2E-14
score: 54.5
IPR037103Tubulin/FtsZ-like, C-terminal domainGENE3D3.30.1330.20coord: 112..169
e-value: 1.8E-17
score: 65.3
IPR037103Tubulin/FtsZ-like, C-terminal domainGENE3D3.30.1330.20coord: 73..111
e-value: 2.9E-8
score: 35.9
IPR036525Tubulin/FtsZ, GTPase domain superfamilyGENE3D3.40.50.1440Tubulin/FtsZ, GTPase domaincoord: 1..72
e-value: 7.9E-25
score: 89.7
IPR036525Tubulin/FtsZ, GTPase domain superfamilySUPERFAMILY52490Tubulin nucleotide-binding domain-likecoord: 1..51
IPR000217TubulinPANTHERPTHR11588TUBULINcoord: 1..186
NoneNo IPR availablePANTHERPTHR11588:SF383TUBULIN ALPHA-1 CHAINcoord: 1..186
IPR008280Tubulin/FtsZ, C-terminalSUPERFAMILY55307Tubulin C-terminal domain-likecoord: 53..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_653_length_20221_cov_4.515748contigNODE_653_length_20221_cov_4.515748:16848..17472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1423.t1Gcaud1423.t1Gracilaria caudata M_176_S67 malemRNANODE_653_length_20221_cov_4.515748 16848..17472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1423.t1 ID=Gcaud1423.t1|Name=Gcaud1423.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=187bp
LLEHLDLGVALDNEAIYDICRRSLSIARPTYSNLNRLIAQVVSSLTASLL
FDGAWNVDIKKFQTGLVPSPRIHFMLSAYAPIMAKEKAHHEKSSVAEITL
VVFQPNSATFKRDVNAAVASIKSKRSIQFVEWSPTGMKIGINSQPPTLVK
DDDPAESKISVCSIADCTAIAEMFAPINATFDLMFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002452Alpha_tubulin
IPR018316Tubulin/FtsZ_2-layer-sand-dom
IPR037103Tubulin/FtsZ-like_C
IPR036525Tubulin/FtsZ_GTPase_sf
IPR000217Tubulin
IPR008280Tub_FtsZ_C