Gcaud1318.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1318.t1
Unique NameGcaud1318.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length229
Homology
BLAST of Gcaud1318.t1 vs. uniprot
Match: A0A2V3IKK9_9FLOR (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKK9_9FLOR)

HSP 1 Score: 254 bits (649), Expect = 4.050e-81
Identity = 128/226 (56.64%), Postives = 157/226 (69.47%), Query Frame = 0
Query:    1 MGNLRDTTTVRKAVEGCDGVISASGTRNFEASSDNHPEAVDYKGLKTLANCFFESQLEQDFVMMFSGDTNSFGDQGEHDTKPMEQGVVATSEDYHCTETSRFVLISSIGVTRPERFPQLQQMGSVLTYKLSGEDALRKSGCAYTIVRPGGFTDMPAGHFPVILDQGDRIAGSISRADVAEICAEAIFLKSATNVTFECVSPRPDMVDSSQRTKFSPNMFSQLVSEE 226
            M +LRD  T+RKAV  C GVISASGTRNF+ +  N PE VD+KG++ L+ CFF++ LE D  +MFS D +             +Q  + T+      + SRFVL+SS+GVTRPE FP LQQM S+LTYKL GEDALR+SGC++TIVRPG   D+     P+ILDQGDRIAGSISRADVA ICAEAIF  +ATNVTFECV+  P +   S   +FSP+MF  LV EE
Sbjct:   99 MADLRDERTLRKAVSACHGVISASGTRNFDPADPNRPELVDFKGIQLLSQCFFDALLEHDLTIMFSDDAHRAEHPFNQTVHSHQQRPITTATQNQLLDPSRFVLLSSLGVTRPEAFPHLQQMNSLLTYKLCGEDALRESGCSFTIVRPGALVDVEPRQTPIILDQGDRIAGSISRADVAHICAEAIFRPTATNVTFECVATPPALTQPSSEKRFSPHMFEHLVPEE 324          
BLAST of Gcaud1318.t1 vs. uniprot
Match: A0A0A9CT88_ARUDO (NAD(P)-bd_dom domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9CT88_ARUDO)

HSP 1 Score: 97.8 bits (242), Expect = 1.650e-21
Identity = 58/116 (50.00%), Postives = 70/116 (60.34%), Query Frame = 0
Query:   99 TSRFVLISSIGVTRPERF-------PQL----QQMGSVLTYKLSGEDALRKSGCAYTIVRPGGFTDMPAGHFPVILDQGDRIAGSISRADVAEICAEAIFLKSATNVTFECVSPRP 203
            T RFV +SS GVTRPER        P      +++GS+LTYKL GED +R+SG  YTIVRP   T+ PAG   +I DQGD I G ISR +VA IC  A+   +A   TFE  S  P
Sbjct:   53 TPRFVHVSSAGVTRPERSGLDLSKKPSAVRLNRELGSILTYKLKGEDLIRESGIPYTIVRPCALTEEPAGA-DLIFDQGDNITGKISREEVARICVVALASPNAVGKTFEVKSTVP 167          
BLAST of Gcaud1318.t1 vs. uniprot
Match: A0A453ATR9_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453ATR9_AEGTS)

HSP 1 Score: 98.2 bits (243), Expect = 6.860e-21
Identity = 58/117 (49.57%), Postives = 71/117 (60.68%), Query Frame = 0
Query:   99 TSRFVLISSIGVTRPERFPQL------------QQMGSVLTYKLSGEDALRKSGCAYTIVRPGGFTDMPAGHFPVILDQGDRIAGSISRADVAEICAEAIFLKSATNVTFECVSPRP 203
            T RFV +SS GVTRPER P L            +++GS+LTYKL GED +R+SG  YTIVRP   T+ PAG   +I +QGD I G ISR +VA +C  A+   SA   TFE  S  P
Sbjct:  143 TPRFVHVSSAGVTRPER-PGLDLSKQPPAVRMNKELGSILTYKLKGEDLIRESGVPYTIVRPCALTEEPAGA-DLIFEQGDNITGKISREEVARLCVAALASPSAVGKTFEVKSTVP 257          
BLAST of Gcaud1318.t1 vs. uniprot
Match: A0A1Z4RBC2_9CYAN (NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 n=1 Tax=Calothrix sp. NIES-4101 TaxID=2005461 RepID=A0A1Z4RBC2_9CYAN)

HSP 1 Score: 99.8 bits (247), Expect = 1.320e-20
Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = 0
Query:  100 SRFVLISSIGVTRPERF--------PQLQ---QMGSVLTYKLSGEDALRKSGCAYTIVRPGGFTDMPAGHFPVILDQGDRIAGSISRADVAEICAEAIFLKSATNVTFECVSPRPDMVDSSQRTKFSPNMFSQLVSEETN 228
            SRFVL+SS GVTRP R         P ++   Q+G +LT+KL GED+LR+SG +YTI+RP   T+  AG   +IL+QGD I G ISR D+AE+C +A+    A NVTFE  +      ++S   K   N+F+ L   ETN
Sbjct:  374 SRFVLVSSAGVTRPGRAGINLEEEPPAVRLNDQLGGILTWKLKGEDSLRESGISYTIIRPCALTE-EAGGKELILEQGDNIRGKISRDDIAELCVQALQNTQACNVTFEVKA-----TENSANHKNWENLFAGL---ETN 504          
BLAST of Gcaud1318.t1 vs. uniprot
Match: A0A453ATX5_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453ATX5_AEGTS)

HSP 1 Score: 98.2 bits (243), Expect = 1.900e-20
Identity = 58/117 (49.57%), Postives = 71/117 (60.68%), Query Frame = 0
Query:   99 TSRFVLISSIGVTRPERFPQL------------QQMGSVLTYKLSGEDALRKSGCAYTIVRPGGFTDMPAGHFPVILDQGDRIAGSISRADVAEICAEAIFLKSATNVTFECVSPRP 203
            T RFV +SS GVTRPER P L            +++GS+LTYKL GED +R+SG  YTIVRP   T+ PAG   +I +QGD I G ISR +VA +C  A+   SA   TFE  S  P
Sbjct:  219 TPRFVHVSSAGVTRPER-PGLDLSKQPPAVRMNKELGSILTYKLKGEDLIRESGVPYTIVRPCALTEEPAGA-DLIFEQGDNITGKISREEVARLCVAALASPSAVGKTFEVKSTVP 333          
BLAST of Gcaud1318.t1 vs. uniprot
Match: A0A0A9DFN7_ARUDO (Uncharacterized protein n=3 Tax=PACMAD clade TaxID=147370 RepID=A0A0A9DFN7_ARUDO)

HSP 1 Score: 99.4 bits (246), Expect = 2.250e-20
Identity = 59/117 (50.43%), Postives = 71/117 (60.68%), Query Frame = 0
Query:   99 TSRFVLISSIGVTRPERFPQL------------QQMGSVLTYKLSGEDALRKSGCAYTIVRPGGFTDMPAGHFPVILDQGDRIAGSISRADVAEICAEAIFLKSATNVTFECVSPRP 203
            T RFV +SS GVTRPER P L            +++GS+LTYKL GED +R+SG  YTIVRP   T+ PAG   +I DQGD I G ISR +VA IC  A+   +A   TFE  S  P
Sbjct:  440 TPRFVHVSSAGVTRPER-PGLDLSKQPPAVRLNKELGSILTYKLKGEDLIRESGIPYTIVRPCALTEEPAGA-DLIFDQGDNITGKISREEVARICVAALASPNAVGKTFEVKSTVP 554          
BLAST of Gcaud1318.t1 vs. uniprot
Match: A0A5J9VCJ1_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9VCJ1_9POAL)

HSP 1 Score: 99.0 bits (245), Expect = 3.090e-20
Identity = 59/117 (50.43%), Postives = 71/117 (60.68%), Query Frame = 0
Query:   99 TSRFVLISSIGVTRPERFPQL------------QQMGSVLTYKLSGEDALRKSGCAYTIVRPGGFTDMPAGHFPVILDQGDRIAGSISRADVAEICAEAIFLKSATNVTFECVSPRP 203
            T RFV +SS GVTRPER P L            +++GS+LTYKL GED +R+SG  YTIVRP   T+ PAG   +I DQGD I G ISR +VA IC  A+   +A   TFE  S  P
Sbjct:  436 TPRFVHVSSAGVTRPER-PGLDLSKQPPAVRLNKELGSILTYKLKGEDLVRESGIPYTIVRPCALTEEPAGA-DLIFDQGDNITGKISREEVARICVAALSSPNAVGKTFEVKSTVP 550          
BLAST of Gcaud1318.t1 vs. uniprot
Match: A0A2T0PZX8_9ACTN (Uncharacterized protein YbjT (DUF2867 family) n=1 Tax=Allonocardiopsis opalescens TaxID=1144618 RepID=A0A2T0PZX8_9ACTN)

HSP 1 Score: 94.7 bits (234), Expect = 3.700e-20
Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:   98 ETSRFVLISSIGVTRPERFPQLQQMGSVLTYKLSGEDALRKSGCAYTIVRPGGFTDMPAGHFPVILDQGDRIAGSISRADVAEICAEAIFLKSATNVTFE 197
            +  RFVL+SSI VTRP+ +    + G +L ++L GEDA+R SG  YT+VRP   TD PAG   V L++GDR  G ISR+DVA+ C  A+   +A  +TFE
Sbjct:  104 QLERFVLVSSIYVTRPDHY--FNEWGRLLDWRLRGEDAVRASGFPYTVVRPSWLTDEPAGRAGVRLERGDRGDGKISRSDVAQACVHALSSPAAVGLTFE 201          
BLAST of Gcaud1318.t1 vs. uniprot
Match: A0A446LZ58_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446LZ58_TRITD)

HSP 1 Score: 98.6 bits (244), Expect = 4.160e-20
Identity = 59/128 (46.09%), Postives = 74/128 (57.81%), Query Frame = 0
Query:   99 TSRFVLISSIGVTRPERFPQL------------QQMGSVLTYKLSGEDALRKSGCAYTIVRPGGFTDMPAGHFPVILDQGDRIAGSISRADVAEICAEAIFLKSATNVTFECVSPRPDMVDSSQRTKF 214
            T RFV +SS GVTRPER P L            +++GS+LTYKL GED +R+SG  YTIVRP   T+ PAG   +I +QGD I G ISR +VA +C  A+   SA   TFE    +P     + R  F
Sbjct:  431 TPRFVHVSSAGVTRPER-PGLDLSKQPPAVRMNKELGSILTYKLKGEDLIRESGVPYTIVRPCALTEEPAGA-DLIFEQGDNITGKISREEVARLCVAALASPSAVGKTFEVKFLQPTCERDTSRAPF 556          
BLAST of Gcaud1318.t1 vs. uniprot
Match: A0A8J5S211_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5S211_ZIZPA)

HSP 1 Score: 97.1 bits (240), Expect = 4.600e-20
Identity = 58/117 (49.57%), Postives = 72/117 (61.54%), Query Frame = 0
Query:   99 TSRFVLISSIGVTRPERFPQL------------QQMGSVLTYKLSGEDALRKSGCAYTIVRPGGFTDMPAGHFPVILDQGDRIAGSISRADVAEICAEAIFLKSATNVTFECVSPRP 203
            T RFV +SS GVTRPER P L            +++GS+LTYKL GED +R+SG  YTIVRP   T+ P+G   +I DQGD I G ISR +VA IC  A+   +A + TFE  S  P
Sbjct:  211 TPRFVHVSSAGVTRPER-PGLDLSKQPPAVRLNKELGSILTYKLKGEDLIRESGIPYTIVRPCALTEEPSGA-DLIFDQGDNITGKISREEVALICIAALASPNAVDKTFEVKSTVP 325          
The following BLAST results are available for this feature:
BLAST of Gcaud1318.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKK9_9FLOR4.050e-8156.64NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
A0A0A9CT88_ARUDO1.650e-2150.00NAD(P)-bd_dom domain-containing protein n=1 Tax=Ar... [more]
A0A453ATR9_AEGTS6.860e-2149.57Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A1Z4RBC2_9CYAN1.320e-2045.71NADH:ubiquinone oxidoreductase complex I intermedi... [more]
A0A453ATX5_AEGTS1.900e-2049.57Uncharacterized protein n=2 Tax=Aegilops tauschii ... [more]
A0A0A9DFN7_ARUDO2.250e-2050.43Uncharacterized protein n=3 Tax=PACMAD clade TaxID... [more]
A0A5J9VCJ1_9POAL3.090e-2050.43Uncharacterized protein n=1 Tax=Eragrostis curvula... [more]
A0A2T0PZX8_9ACTN3.700e-2049.00Uncharacterized protein YbjT (DUF2867 family) n=1 ... [more]
A0A446LZ58_TRITD4.160e-2046.09Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]
A0A8J5S211_ZIZPA4.600e-2049.57Uncharacterized protein n=1 Tax=Zizania palustris ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016040NAD(P)-binding domainPFAMPF13460NAD_binding_10coord: 2..186
e-value: 3.6E-22
score: 79.1
NoneNo IPR availableGENE3D3.40.50.720coord: 1..223
e-value: 2.3E-34
score: 121.0
NoneNo IPR availablePANTHERPTHR15020FLAVIN REDUCTASE-RELATEDcoord: 3..205
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 2..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_371_length_28318_cov_4.596486contigNODE_371_length_28318_cov_4.596486:14464..15150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1318.t1Gcaud1318.t1Gracilaria caudata M_176_S67 malemRNANODE_371_length_28318_cov_4.596486 14464..15150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1318.t1 ID=Gcaud1318.t1|Name=Gcaud1318.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=229bp
MGNLRDTTTVRKAVEGCDGVISASGTRNFEASSDNHPEAVDYKGLKTLAN
CFFESQLEQDFVMMFSGDTNSFGDQGEHDTKPMEQGVVATSEDYHCTETS
RFVLISSIGVTRPERFPQLQQMGSVLTYKLSGEDALRKSGCAYTIVRPGG
FTDMPAGHFPVILDQGDRIAGSISRADVAEICAEAIFLKSATNVTFECVS
PRPDMVDSSQRTKFSPNMFSQLVSEETN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR036291NAD(P)-bd_dom_sf