Gcaud10214.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud10214.t1
Unique NameGcaud10214.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length308
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud10214.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..256
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 282..303
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 280..307
score: 11.239817

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1251_length_12131_cov_4.382475contigNODE_1251_length_12131_cov_4.382475:5111..6034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud10214.t1Gcaud10214.t1Gracilaria caudata M_176_S67 malemRNANODE_1251_length_12131_cov_4.382475 5111..6034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud10214.t1 ID=Gcaud10214.t1|Name=Gcaud10214.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=308bp
MNSLPKLKLEGLSQPEADDSIASPVTPATAENETGATGNGFGNKRRRIGG
LPISMLVNEKDDDTPVSYPLEYQPPLPIKPMTPASPKLPPILYQMSEFVT
QLGERAVEGPLPSFKSLGLPTIEHPTAAAESKNSTDASQSQSKASTAKPD
EIEAPGHDETVASDSGKDTACTEPEREPKAPRRKRTRAERDMPITTEPEI
ESLIKTLREKEQSQSGEVKQRGEAESSEPQAQEENKAQAQTAGTTTANSL
SLGVSKSAKVTKPRKNRRGRPNGDDRPRLHACPTCQRRFHQQSGVANHYR
IVHFKDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type