Gcaud10077.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud10077.t1
Unique NameGcaud10077.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1242
Homology
BLAST of Gcaud10077.t1 vs. uniprot
Match: A0A2V3J0M6_9FLOR (DNA-directed RNA polymerase subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0M6_9FLOR)

HSP 1 Score: 2184 bits (5658), Expect = 0.000e+0
Identity = 1072/1244 (86.17%), Postives = 1143/1244 (91.88%), Query Frame = 0
Query:    1 MKVKAEVRTTEPIHVHTPYIRQDRRKEVNADIGEDLRQHGRFPVHATPLYSSNHHRSQDKYPEQLHDLLRPITAVEDKWRLLPVFLRMKGIARQHIDSFNYLLETEICNIVRANERITSDIDPRWYLKYESVHVGKPCITEDMMTTPLTPQECRLRDMTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVIANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIILRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQIQALLYLGKKAKTFKSPSFGSGHRGGFSSTRSTTQSLKTPSNTNSNGPPPHPRQKTIDHARELLAGVILAHVPVKHFNFWDKAIYIARMCRRVLLALDDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRITSKVAKERSRRRMSDGTDLGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENHVVVLNGLFLGVHTQPHKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDMETGFPRVTDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIEPGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNKASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPVPEDP---NYTTKDGKPRVHPVYGALDEDGIVAPGEQVSSGMIFVNKEVPRVGLTDAPGESNTVSYRPQGLRFKGASPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYSGMSGEPLRAYVFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVFACKKCGLLGYKEWCQTCESGEKIGQLKIPYACKLLIQELQSMNVVPKLLLEGA 1241
            M VKAE++ TEP H +              D+  D+R          P+Y  +H  S DKY EQ+HDLLRPITAVEDKWRLLPVFL+MKGIARQHIDSFNYLLETEICNIVRANE+I SDIDPRWYLKYESVHVG P  T+DM+  P+TPQECRLRD+TYSAPIYVD+KY RG + VL  KLMIGKIPIMLRSNNC+LK KSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKD RG++ANVQSSTHERKSRTTLL+KGN+LYLNHNIL+ DIN+AI+LRAMGIETDQEIIQL+GK+P+FVDGMTPTLHECAQEG+HT+ QALL++GKKAKTFKS S G G R G+SS+R+ + S K P+ T+ N P PHP+QKTIDHARELLAGVILAHVPVK FNFWDKAIY+ARMCRRVLLA+DDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKK N+DLKK++DTQIQRI SKVAK+R+RRR+SDGTDLGRAIPRPN+D  KYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENHVVVLNGLFLGVH+QPHKLT YLRHLRR+GA+GEYVSVFEQPE K VHVACDGGRVTRPLIIVD ETG PRV D HVEKVLKGLMGWKDLLQEGLIEYLDVNEENNT IATYETDIE GKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIP+VGFERLPGGQNASLMVMSYSGYDIEDAVVLN+ASIDRGYGRCIVTRKHA GCRR+ NGQCDRIMP PEDP      +  G+P++HPVY +LD DGIVAPGEQ+S GM+FVNKEVPRVGLTD PGE++ VSYRPQGL+FKG SPV+CDKVLLTSNDHDHVLVKVMLRETRRPE+GDKFSSRHGQKGVCGLIVSQEDMPFSD GIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDK+EVCA SLVRAGYNYNGKDFVYSGMSGEPLRA+VFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTV ACKKCGL+GYKEWCQTCESGE + QLKIPYACKLL+QELQ+MNVVPKLLLE A
Sbjct:    1 MNVKAELQKTEPQHFYP------------QDVKPDIR---------VPIYQHHHPVSFDKYTEQVHDLLRPITAVEDKWRLLPVFLQMKGIARQHIDSFNYLLETEICNIVRANEKIISDIDPRWYLKYESVHVGMPSQTDDMIKKPITPQECRLRDITYSAPIYVDVKYTRGSDLVLSQKLMIGKIPIMLRSNNCVLKNKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDNRGLMANVQSSTHERKSRTTLLLKGNRLYLNHNILEVDINIAIVLRAMGIETDQEIIQLIGKDPKFVDGMTPTLHECAQEGVHTETQALLFIGKKAKTFKSSSSGFGSRTGYSSSRNASFSFKMPAKTDPNEPVPHPKQKTIDHARELLAGVILAHVPVKQFNFWDKAIYMARMCRRVLLAMDDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKKFNSDLKKSVDTQIQRIASKVAKDRTRRRISDGTDLGRAIPRPNVDVSKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENHVVVLNGLFLGVHSQPHKLTVYLRHLRRTGAIGEYVSVFEQPEHKVVHVACDGGRVTRPLIIVDTETGMPRVQDEHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTFIATYETDIEHGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPIVGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHATGCRRYPNGQCDRIMPAPEDPFRKEENSNSGRPKIHPVYSSLDLDGIVAPGEQLSKGMVFVNKEVPRVGLTDVPGETSAVSYRPQGLKFKGPSPVVCDKVLLTSNDHDHVLVKVMLRETRRPEIGDKFSSRHGQKGVCGLIVSQEDMPFSDKGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDKIEVCAASLVRAGYNYNGKDFVYSGMSGEPLRAFVFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVHACKKCGLIGYKEWCQTCESGENVSQLKIPYACKLLMQELQAMNVVPKLLLETA 1223          
BLAST of Gcaud10077.t1 vs. uniprot
Match: R7QMZ9_CHOCR (DNA-directed RNA polymerase subunit beta (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMZ9_CHOCR)

HSP 1 Score: 1783 bits (4619), Expect = 0.000e+0
Identity = 887/1204 (73.67%), Postives = 995/1204 (82.64%), Query Frame = 0
Query:   39 HGRFPVHATPLYSSNHHRSQDKYPEQLHDLLRPITAVEDKWRLLPVFLRMKGIARQHIDSFNYLLETEICNIVRANERITSDIDPRWYLKYESVHVGKPCITEDMMTTPLTPQECRLRDMTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVIANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIILRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQIQALLYLGKKAKTFKSPSFGSGHRGGFSSTRSTTQSLKTPSNTNSNGPPPHPRQKTIDHARELLAGVILAHVPVKHFNFWDKAIYIARMCRRVLLALDDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRITSKVAKERSRRRMSDGTDLGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENHVVVLNGLFLGVHTQPHKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDMETGFPRVTDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIEPGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNKASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPVPEDPNYTTKDGKPRVHPVYGALDEDGIVAPGEQVSSGMIFVNKEVPR-VGLTDAPGESNTV-----SYRPQGLRFKGASPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYSGMSGEPLRAYVFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVFACKKCGLLGYKEWCQTCESGEKIGQLKIPYACKLLIQELQSMNVVPKL 1236
            H  FPV A       + R Q         LL+PI   E+KWRL+P FL+++GIARQHI+SFNYL+ TEI NIVRANE+I S++DPRWYLKY++V VGKPC T+DM+ T +TP ECRLRD TYSAPI VDIK+ RG + VL   L+IGKIPIMLRS NCIL  KSD+ELA +GECPLDPGGYFVV+G EKVIL+QEQLSKNRIIIE D RG+ ANVQSSTHERKSRTTL+VK  K+YL+HN L+AD+N+AI+LRAMG+ETDQEI+QL+G +PR+VDGM PTLHECAQEGI+T  QALL++GKKAKTF+ P+FG                           P P P            AGVILAHVPVKHF+FWDK +++A+M RR+L+A+DDPS VDDKDYYGNKRLELAGQLL+LLFEDLFKK NTDLK+TIDT I +  +K A++RSR+R+                    FRTDTITQGLEFAISTGNW+VKRFKMER+GVTEVLSRLSFISA+GMMTRITSQFEKTRKVSGPRALQPSQWGMLCP+DTPEGEACGLVKNLALMTHVTTDD+PA LERLLYDLGVQPT  LS E++NEN VV LNGL LGVH+QP KLT  LR +RR G +GEYVSVFEQPE K VH+ACDGGRVTRPLIIVD  TG PR+ D HV ++ KGLM W+DLL+EGLIEYLDV+EENNTLIATYE+DI PGKTTH+EIAPWTILG+CAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQH+RTDTLLYLLSYPQRPLVQTK + +VGFERLPGGQNASLMVMSYSGYDIEDA+VLNKAS+DRG+GRCIV RKH++GCRR++NG CDRIMP  ++       G  R +    ALD+DGI+APGE++  GMIFVNKEVP+   LT A   +  +      YRPQ L FKG S V  DKVLLTSND DHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIV+QEDMPFSD GIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEG C  GTAF GD+++ CAESLV AGYNYNGKDFVYSGMSGEPLR YVFSGPIFYQKLKHMVKDKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTV ACK+CGL+GYK+WCQ CESGE +  LKIPYACKLL QELQ+MNVVPKL
Sbjct:   27 HPEFPVSAPQFDPKQYTREQ---------LLQPIKTAEEKWRLIPAFLQLRGIARQHIESFNYLINTEIRNIVRANEKIVSEVDPRWYLKYDAVRVGKPCQTDDMIRTDITPHECRLRDTTYSAPITVDIKHTRGDDIVLSRNLVIGKIPIMLRSGNCILSNKSDKELADVGECPLDPGGYFVVRGTEKVILIQEQLSKNRIIIENDQRGITANVQSSTHERKSRTTLIVKHGKIYLHHNTLEADVNIAIVLRAMGVETDQEIVQLIGTDPRYVDGMAPTLHECAQEGINTSTQALLFIGKKAKTFRGPAFGG-------------------------RPGPRPS-----------AGVILAHVPVKHFDFWDKCVFVAQMLRRILIAMDDPSTVDDKDYYGNKRLELAGQLLALLFEDLFKKFNTDLKRTIDTHITKSQNKAARDRSRKRLD-------------------FRTDTITQGLEFAISTGNWHVKRFKMERSGVTEVLSRLSFISALGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPADTPEGEACGLVKNLALMTHVTTDDDPAPLERLLYDLGVQPTSILSGEEVNENDVVFLNGLILGVHSQPRKLTYRLREMRRKGFIGEYVSVFEQPEHKWVHIACDGGRVTRPLIIVDSVTGQPRIFDEHVSRLRKGLMVWRDLLEEGLIEYLDVSEENNTLIATYESDILPGKTTHIEIAPWTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHIRTDTLLYLLSYPQRPLVQTKTLELVGFERLPGGQNASLMVMSYSGYDIEDAIVLNKASLDRGFGRCIVIRKHSSGCRRYSNGSCDRIMPRMDEVGSKDNPGAVRRNERLSALDKDGIIAPGEKLEKGMIFVNKEVPQDTTLTGAAAAAAIIIGGPQEYRPQPLSFKGPSTVAADKVLLTSNDLDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVTQEDMPFSDKGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGKCRYGTAFDGDRLDECAESLVSAGYNYNGKDFVYSGMSGEPLRGYVFSGPIFYQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVHACKECGLIGYKDWCQMCESGENVATLKIPYACKLLFQELQAMNVVPKL 1166          
BLAST of Gcaud10077.t1 vs. uniprot
Match: UPI001E1E13B7 (LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E13B7)

HSP 1 Score: 1506 bits (3898), Expect = 0.000e+0
Identity = 742/1183 (62.72%), Postives = 920/1183 (77.77%), Query Frame = 0
Query:   67 DLLRPITAVEDKWRLLPVFLRMKGIARQHIDSFNYLLETEICNIVRANERITSDIDPRWYLKYESVHVGKPCITEDMMTTPLT--PQECRLRDMTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVIANVQSSTHERKSRTTLLVKGNKLYLNHNILDAD-INVAIILRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQIQALLYLGKKAKTFKSPSFGSGHRGGFSSTRSTTQSLKTPSNTNSNGPPPHPRQKTIDHARELLAGVILAHVPVKHFNFWDKAIYIARMCRRVLLALDDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRITSKVAKE-RSRRRMSDGTDLGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENHVVVLNGLFLGVHTQPHKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDMETGFPRVTDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIEPGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNKASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPVPEDPNYTTKDGKPRVHPVYGALDEDGIVAPGEQVSSGMIFVNKEVP------RVGLTDAPGESNTVSYRPQGLRFKGASPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYSGMSGEPLRAYVFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVFACKKCGLLGYKEWCQTCESGEKIGQLKIPYACKLLIQELQSMNVVPKLLLE 1239
            DL RPI  V +K++L+P FL ++G+ RQH+DS+N+ +  E+  IVRANERITSD+DPR+++KYE + V  P   ED ++  L+  P ECRLRD+TYSAPI V +++ RG E V+   + IG IP+MLRSN C L  K++++LA LGECPLDPGGYFVV+G EKV+LMQEQLS+NRII+EKD +G+ A+VQSS HER++RTT++++  +LYL HN L+ D +N+AI+ RA+G+E+D E++Q +G +  FVD + PT+ ECAQ GI T  QAL ++G + KTF++P  G+  R                                ID+AR+LLA  IL+H+P KHFNF +K +++A+M RR+L A++DP+ +DDKDYYGNKR+EL GQL++LLFEDLFKK N+D+K++IDT IQ+  +   K  R   R+ + + + R+  R  +D  +  RTDTITQGLEFAISTGNW+VKR KMER+GVTEVLSRLSFISA+GMMTR+TSQFEKTRKVSGPR+LQPSQWGMLCPSDTPEGEACGLVKNLAL++HVT + +   L RLLYDLGVQ T  LS +++NE+H+V LNG  LG+H++P  L   +R+LRR G + E++SVFE+ EQ+ V+VA D GR+ RPLIIVD  +G PR+   H+ ++  G + W+DLL++G++E++DVNEENN  +AT+E +I PG+TTHLEIAP TILG+CAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQH RTDTLLYLL+YPQRPLVQT+ + +VGFERLPGGQNASL VMSYSGYDIEDA+VLNKAS+DRG+GRC V RK+A GCRR+  G  DRIMP P D + +      +V  V   L  DGI APG ++SSG IFVNKEVP      R G+  A        YR Q L +KG    + DKVL++SND DHVLVK M+R+TRRPE+GDKFSSRHGQKGVCGLI  QEDMPFSD GIVPDLIMNPHGFPSRMTVGKMIEF+AGKAGVFEG   +GTAF GD VE CA +LV  GYNYNGKD  Y GM+GEPLR +VFSGPIFYQKLKHMV+DKMHAR+RGPRA+LTRQPTEGRSR+GGLRLGEMERDCLIGYGASMLLMERLM+SSD F V AC +CGLLGYK+WCQ C +G  + +LKIPYACKLL QELQ+MNVVP+L L+
Sbjct:   96 DLGRPIKTVGEKYKLIPAFLAVRGLVRQHLDSYNHFISHEMKAIVRANERITSDVDPRFFMKYEDITVLPPSHVEDSVSVSLSLAPHECRLRDITYSAPIEVTLRFTRGEELVVQKHVRIGCIPVMLRSNICTLYNKTEQDLASLGECPLDPGGYFVVRGTEKVVLMQEQLSRNRIIVEKDPKGISASVQSSAHERRTRTTVMMRNRRLYLQHNTLEQDGVNLAIVFRAIGVESDLEMLQFIGTDAEFVDALAPTIAECAQYGIRTATQALRHIGNRVKTFRAPFGGASKR-------------------------------KIDNARDLLANTILSHIPAKHFNFSEKVVFLAQMARRMLRAMNDPTLLDDKDYYGNKRIELPGQLIALLFEDLFKKFNSDMKRSIDTAIQKEQTHAGKALRKSGRIEEASQV-RSKYRSLVDVTRCIRTDTITQGLEFAISTGNWSVKRLKMERSGVTEVLSRLSFISALGMMTRVTSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALLSHVTVEADELPLVRLLYDLGVQSTSYLSGDEINESHIVFLNGNLLGIHSEPDVLAHRIRYLRRKGLIREFISVFERAEQQCVYVASDCGRICRPLIIVDPNSGVPRLRSDHLVRITGGTLTWRDLLEDGIVEFVDVNEENNCFVATWEVNIVPGRTTHLEIAPLTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHKRTDTLLYLLTYPQRPLVQTRTLTLVGFERLPGGQNASLAVMSYSGYDIEDAIVLNKASLDRGFGRCSVIRKNATGCRRYTTGVSDRIMPPPPDCDIS------KVVLVNSILTGDGIAAPGMKLSSGHIFVNKEVPADTAIQRNGVPSAMQIGQPAMYRAQPLVYKGHVTAVVDKVLVSSNDSDHVLVKTMIRDTRRPEIGDKFSSRHGQKGVCGLIAQQEDMPFSDRGIVPDLIMNPHGFPSRMTVGKMIEFVAGKAGVFEGRFRNGTAFDGDHVEECARALVARGYNYNGKDMFYCGMTGEPLRGFVFSGPIFYQKLKHMVQDKMHARSRGPRALLTRQPTEGRSREGGLRLGEMERDCLIGYGASMLLMERLMISSDAFVVHACNECGLLGYKDWCQYCSNGSNVAELKIPYACKLLFQELQAMNVVPRLKLQ 1240          
BLAST of Gcaud10077.t1 vs. uniprot
Match: A0A7S1XB87_9RHOD (DNA-directed RNA polymerase subunit beta n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XB87_9RHOD)

HSP 1 Score: 1407 bits (3641), Expect = 0.000e+0
Identity = 727/1209 (60.13%), Postives = 878/1209 (72.62%), Query Frame = 0
Query:   42 FPVHATPLYSSNHHRSQDKYPEQLHDLLRPITAVEDKWRLLPVFLRMKGIARQHIDSFNYLLETEICNIVRANERITSDIDPRWYLKYESVHVGKPCITED---MMTTPLTPQECRLRDMTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARG-VIANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIILRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQE-GIHTQIQALLYLGKKAKTFKSPSFGSGHRGGFSSTRSTTQSLKTPSNTNSNGPPPHPRQKTIDHARELLAGVILAHVPVKHFNFWDKAIYIARMCRRVLLALDDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRITSKVAKERSRRRMSDGTDLGRAIPRPNIDAPKYFRTD-TITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNE--NHVVVLNGLFLGVHTQPHKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDMETGFPRVTDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIEPGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNKASIDRGYGRCIVTRKHAAGCRRHANGQCDRIM-PVPEDPNYTTKDGKPRVHPVYGALDEDGIVAPGEQVSSGMIFVNKEVPRVG--LTDAPGESNTVSYRPQGLRFKGASPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYSGMSGEPLRAYVFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVFACKKCGLLGYKEWCQTCESGEKIGQLKIPYACKLLIQELQSMNVVPKLLLE 1239
             P  +T   +S  H     Y  +   L   I   EDKW+LLP FL+++G+ RQHIDSF++ ++ +I +IV+ANE++ SD DP +YL++ +V VGKP   E    +    +TPQECR+RDMTY+API VD++Y RG + VL H + IG++PIMLRS  CIL GK +  L  LGECPLDPGGYFV++G EKVIL+QEQLSKNRI++E D++G V ++VQSSTHERKSRT ++ K +  YL HN    DI V + L+AMGIETD EI QLVG E  +   M  T+ +   E  I T+ QAL Y+G + +  +                              +GP  H ++   D ARE LA V+LAHVPV +FNFW KA+++A+M RR++ A+ DP+A+DD+DYYGNKRLELAGQLLSLLFEDLFKK   DLK+  DT                      +L + +    +D    FRT+ TI+QGLEFAISTGNW+VKRFKMERAGVT+VLSRLSFISAVGMMTRITSQFEKTRKVSGPR+LQPSQWGMLCPSDTPEGE+CGLVKNLALMTHVTTD +P+ + RL Y+LGV+  + L+  ++N   N V+ LNGL LG H QP+KL   LR LRR G V E+VS+ E P Q  VH+A DGGRV RPLIIVD     PRV   H+++V+KG   W D L EGL+EYLDVNEENN LIA  E DI   + THLEIAP  ILG+CAGLIPYPHHNQSPRNTYQCAMGKQAIGA+AYNQH RTDTLLYLLSYPQR LV+TK + +VGF+RLPGGQNA L VMS+SGYDIEDAV+LN+AS+DRG+GRC V RKH    R++ NG  DR++ P   + + +    + R    + ALD DGI A G++V  G IF+NKE P     + + P  S TV YRP  + FKG    I D+VL+TSN+ DH L+K ++RETR PE+GDKFSSRHGQKGVCGLIV Q+DMPF+D G+ PDLIMNPHGFPSRMTVGK+IEFI+GKA VF G  GDG+AF GDK+EVCA  LVR G+++ GKD  YSG SGE LR YVFSGPIFYQKLKHMVKDKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LL+ERLM SSD F VF C+KCGLLGYK WCQ C +G     +K+PYACKLL QELQSMN+ P+L LE
Sbjct:    8 IPTSSTKTTTSTTH----VYQTETTHLDDAIPTAEDKWKLLPTFLQVRGLVRQHIDSFDFFVQEDIRHIVQANEKVLSDADPAFYLRFLNVKVGKPSFEEGSDFVSRQDVTPQECRIRDMTYAAPITVDVQYTRGRDVVLRHDVPIGRMPIMLRSCRCILTGKDEVALGGLGECPLDPGGYFVIRGTEKVILIQEQLSKNRILVELDSKGQVCSSVQSSTHERKSRTMIVTKKDCFYLKHNNFTEDIPVTVALKAMGIETDHEITQLVGTEDIYASAMATTIAKATFELRIFTEQQALEYIGDRVRFARKGK---------------------------SGPRDHVKR---DLARETLAQVVLAHVPVPNFNFWQKAVFVAQMLRRMIAAVIDPTAIDDRDYYGNKRLELAGQLLSLLFEDLFKKFCQDLKRHADT----------------------NLSKPVKAGPLDITTAFRTNNTISQGLEFAISTGNWHVKRFKMERAGVTQVLSRLSFISAVGMMTRITSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHVTTDADPSPIARLCYNLGVEDIHTLTGAEINNAFNAVITLNGLVLGCHRQPNKLGSDLRRLRRRGLVDEFVSICEVPSQNAVHIASDGGRVCRPLIIVDNMK--PRVHKGHIDEVVKGKRKWLDFLHEGLVEYLDVNEENNALIALDERDIIHDRYTHLEIAPLAILGVCAGLIPYPHHNQSPRNTYQCAMGKQAIGAVAYNQHQRTDTLLYLLSYPQRALVETKMVSLVGFDRLPGGQNACLCVMSFSGYDIEDAVILNQASVDRGFGRCTVVRKHGTTMRKYPNGSQDRVVAPEAVEVSDSMASSEARRQIRFSALDVDGIAAAGDRVFPGSIFINKESPNDTSVIQEGPPGSKTVEYRPTPMTFKGPVEAIVDRVLITSNETDHFLIKAIIRETRTPEVGDKFSSRHGQKGVCGLIVQQQDMPFNDFGVCPDLIMNPHGFPSRMTVGKLIEFISGKAAVFSGKIGDGSAFGGDKLEVCAAELVRHGFSFTGKDLFYSGTSGEVLRGYVFSGPIFYQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASNLLLERLMYSSDAFDVFVCQKCGLLGYKGWCQACRTGASTLSIKLPYACKLLFQELQSMNIAPRLRLE 1158          
BLAST of Gcaud10077.t1 vs. uniprot
Match: A0A1X6NUN4_PORUM (DNA-directed RNA polymerase subunit beta n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUN4_PORUM)

HSP 1 Score: 1397 bits (3617), Expect = 0.000e+0
Identity = 723/1118 (64.67%), Postives = 851/1118 (76.12%), Query Frame = 0
Query:  143 MMTTPLTPQECRLRDMTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVI-ANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIILRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQIQALLYLGKKAKTFKSPSFGSGHRGGFSSTRSTTQSLKTPSNTNSNGPP---PHPRQKTIDHARELLAGVILAHVPVKHFNFWDKAIYIARMCRRVLLALDDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRITSKVAKERSRRRMSDGTDLGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENH--VVVLNGLFLGVHTQPHKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDMETGFPRVTDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIEPGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNKASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPVPEDPNYTTKDGKP----------RVHPVYGALDEDGIVAPGEQVSSGMIFVNKEVPR-----VGLTDAPGESNTVSYRPQGLRFKGASPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYSGMSGEPLRAYVFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVFACKKCGLLGYKEWCQTCESGEKIGQLKIPYACKLLIQELQSMNVVPKLLLE 1239
            M+ + +TPQ+CRLRDMTY+API  D++Y RG E VL     IG++PIMLRS +C L GK+D ELA LGECPLDPGGYFVV+G EKVIL+QEQLSKNRII+E DA+G + A+VQSSTHERKSRTT++VK  ++YL HN L  D+ V + LRAMG+ETDQE++QLVG    ++DG+ P+L ECA   I+T  QAL +LG+K ++ + P+ G    GG            T     ++G P   P    K  +HAR+LLAGV+LAHVPV+ +NF DK IY+A+M RR+L A +DP+ +DDKDYYGNKRLELAGQLLSLLFEDLFKKL +D+K+  +    +         SRR    G  L         DA +  R DTITQGLEFAISTGNW+VKRFKMERAGVTEVLSRLSFI+A+GMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGE+CGLVKNLALMTHVTTDD+ A L RLLYDLG + T  LS  +LNE +  +V LNGL LGVH  P  L   LR LRR   +GE+VSV+  P  + +++ACDGGRV RPLIIV    G P VTD H+  + +G + W+DL+ +GLIEYLDVNEENN LIAT E +I  G TTHLEIAP TILG+CAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQH R DTLLYLLSYPQRP+VQT+ + +VGF RLPGGQNASL VMSYSGYDIEDAVVLN+AS+DRG+GRC+V RKH++  RR+ N   DRIMP                        R +  Y ALD+DG+V+PG ++ SG  + NKEVP       G +  PG +  ++YR   L FKG +  + +KVLLTS++ +H +VKVM+RETRRPELGDKFSSRHGQKGVCGLI  QED+PF+D G+ PDLIMNPHGFPSRMTVGKMIEFIAGKAGV EG    GTAF GD++E CAE+LV AGY+Y+GKD  YSG +GEPLRAYVF+GPIFYQKLKHMVKDKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLM SSD FTV+AC+ CGLLGYK WCQ C +G  +  L+IPYACKLL QELQ MNVVP+L LE
Sbjct:    1 MVRSTVTPQQCRLRDMTYAAPILADVQYVRGREVVLRRDWAIGRMPIMLRSEHCYLSGKTDAELAGLGECPLDPGGYFVVRGTEKVILIQEQLSKNRIIVEFDAKGCLCASVQSSTHERKSRTTIVVKAGRMYLRHNTLSEDVPVIVALRAMGVETDQEVVQLVGSGDMYMDGVEPSLQECASLNIYTSSQALDFLGQKVRSVR-PAGGLQRFGGXXXXXXXXXXATTGVGMVADGVPSMNPAAVSKRKEHARDLLAGVVLAHVPVRRYNFRDKCIYMAQMMRRILAAAEDPTMIDDKDYYGNKRLELAGQLLSLLFEDLFKKLCSDIKRQAELHFSKQKKSDFSMPSRRGSGAGAGL-----MSGYDALQNVRGDTITQGLEFAISTGNWHVKRFKMERAGVTEVLSRLSFIAALGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGESCGLVKNLALMTHVTTDDDSAPLARLLYDLGTEDTAQLSGAELNEGNGALVFLNGLILGVHANPPALAAALRALRRRALIGEFVSVWVHPPHRAIYIACDGGRVCRPLIIVS-AAGVPLVTDDHMTGIGRGTLVWRDLMHDGLIEYLDVNEENNALIATTEPEIMNG-TTHLEIAPLTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHCRADTLLYLLSYPQRPMVQTRTLDLVGFNRLPGGQNASLAVMSYSGYDIEDAVVLNRASVDRGFGRCVVLRKHSSTMRRYPNHTTDRIMPXXXXXXXXXXXXXXXXXXXXXXAARSNARYSALDQDGLVSPGARLKSGYFYANKEVPADTAVVQGGSAGPGRA-PIAYRAAPLIFKGPADAVAEKVLLTSSETEHFVVKVMVRETRRPELGDKFSSRHGQKGVCGLIAPQEDLPFNDAGVCPDLIMNPHGFPSRMTVGKMIEFIAGKAGVHEGRFRMGTAFDGDRIEDCAEALVAAGYSYSGKDLFYSGSTGEPLRAYVFAGPIFYQKLKHMVKDKMHARARGPRALLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMHSSDAFTVYACQVCGLLGYKGWCQYCRTGASVSALQIPYACKLLFQELQGMNVVPRLKLE 1109          
BLAST of Gcaud10077.t1 vs. uniprot
Match: A0A5J4YYN6_PORPP (DNA-directed RNA polymerase subunit beta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYN6_PORPP)

HSP 1 Score: 1375 bits (3559), Expect = 0.000e+0
Identity = 711/1207 (58.91%), Postives = 866/1207 (71.75%), Query Frame = 0
Query:   65 LHDLLRPITAVEDKWRLLPVFLRMKGIARQHIDSFNYLLETEICNIVRANERITSDIDPRWYLKYESVHVGKPCITEDMMTTPLTPQECRLRDMTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVI-ANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIILRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEG--IHTQIQALLYLGKKAKTFKSPSFGSGHRGGFSSTRSTTQSLKTPSNTNSNGPPPHPRQKTIDHARELLAGVILAHVPVKHFNFWDKAIYIARMCRRVLLALDDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRITSKVAKERSRRRMSDGTDLGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNE--NHVVVLNGLFLGVHTQPHKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDMETGFPRVTDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIEPGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNKASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPVPEDPNYTTKDGKPRVHPVYGALDEDGIVAPGEQVSSGMIFVNKEVPRVGLTDAP-----------------------GESN----TVSYRPQGLRFKGASPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYSGMSGEPLRAYVFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVFACKKCGLLGYKEWCQTCESGEKIGQLKIPYACKLLIQELQSMNVVPKLLLE 1239
            L    RPI   ++KW+LLP  L  +G+  QHIDSFNYL+ TEI NI+RANE++TSD D  +Y+K+  V +G+P + EDM    +TPQ CRLRD+TY+API VD++Y +G   V      IG++PIMLRS NC L  K ++ELA+LGECPLDPGGYF++KG EKVIL+QEQLSKNRI++E D++G + A+VQSSTHERKSRT L+VK  + YL HN L  D+ V I+ +AMG+ ++ EI+Q VG E  F + + P++ ECA     + T+ +AL +LG K +   S +F   HR                          +  ++ +D ARE+LA +ILAHVPV +FNF  K + +A+M RR+L+A  DP  VDD+DYYGNKRLELAGQLL+LLFEDLFKK  +DLK+  D                        L + +     D    FR DTI+ GLEFAISTGNW VKRFKMERAGVT+VLSRLSFISA+GMMTRITSQFEKTRKVSGPR+LQPSQWGMLCPSDTPEGE+CGLVKNLALMTHVTTDD+   + R  Y+LGVQ    L+  +LN   NH+V LNGL +GVH  P +L   LRHLRR G +G++VSVF   +Q+TV +ACDGGRV RPLIIV    G   V   H++++   L  W D L++G+IEYLDVNEENNT I+  E+ IE G TTHLEIAP+TILG+CAGLIP+PHHNQSPRNTYQCAMGKQAIGAIAYNQH R DTLLY LSYPQRPLVQTK I +VGF+RLPGGQNA L VMSYSGYDIEDAVVLN+AS+DRG+GRC V RKHA   + + NG CDRI      P+  + D K R    +  L+ DG+   G+++  G IFVNKE P   +T A                        G S     TV+YRP  L +KG    I DKV+ T+N+ DH L+KV++RETR PELGDKFSSRHGQKGVCGLI  Q DMP++D G+ PDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEG   +GTAF G  V+ CA+ LV+AG++Y+GKD +YSG++GEPLR+YVF GPIFYQKLKHMVKDKMHAR+RGPRA+LTRQPTEGRSRDGGLRLGEMERD L+G+GAS +LMERLM SSD F    C +CG+LGYK WCQ C+S   +  LK+PYACKLL QELQSMN++P+L L+
Sbjct:  104 LEHAARPIKWADEKWKLLPSMLEARGLVSQHIDSFNYLVSTEIKNIIRANEKVTSDADAGFYVKFVDVRIGEPVVEEDMAYRGVTPQICRLRDITYAAPITVDVEYTKGKMKVFKRDQPIGRMPIMLRSRNCRLWNKDEQELAELGECPLDPGGYFIIKGTEKVILIQEQLSKNRILVEYDSKGELCASVQSSTHERKSRTMLVVKHGRFYLRHNSLSEDVPVIILFKAMGMVSEAEIVQFVGTEQEFQEALVPSIEECASAAFNVRTEAEALEWLGAKVRV-SSKAF---HR-------------------------QYQSRRKLDQAREVLASIILAHVPVHNFNFKHKCVLVAQMIRRILIAKQDPETVDDRDYYGNKRLELAGQLLALLFEDLFKKFCSDLKRHADVV----------------------LAKPVVAAQFDIVTNFRQDTISAGLEFAISTGNWTVKRFKMERAGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHVTTDDDAEPVARFCYELGVQEVGILTGLELNHPRNHLVHLNGLIVGVHRYPKQLCEQLRHLRRLGRIGQFVSVFHSEKQRTVFLACDGGRVCRPLIIV--HKGKSLVQPRHLQELALKLRTWHDFLRDGIIEYLDVNEENNTFISWTESKIEAG-TTHLEIAPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAIGAIAYNQHHRVDTLLYFLSYPQRPLVQTKTISLVGFDRLPGGQNACLAVMSYSGYDIEDAVVLNRASLDRGFGRCCVVRKHATLLKTYPNGTCDRISA----PDLASMDEKRREK--HSVLESDGVAGVGQRLKPGQIFVNKESPVDTVTPATTNQAQLAFLPGGGASGGMRGSGAGSSGSAPATVAYRPTPLVYKGQEGGIVDKVVFTANEADHYLMKVLIRETRVPELGDKFSSRHGQKGVCGLIADQVDMPWNDQGVCPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGVFNEGTAFEGCSVDDCAKLLVKAGFSYSGKDMMYSGITGEPLRSYVFQGPIFYQKLKHMVKDKMHARSRGPRALLTRQPTEGRSRDGGLRLGEMERDSLLGFGASAVLMERLMYSSDAFDAEVCAQCGVLGYKGWCQLCKSSTTMAPLKLPYACKLLFQELQSMNILPRLRLQ 1250          
BLAST of Gcaud10077.t1 vs. uniprot
Match: A0A8J5XIQ9_DIALT (Uncharacterized protein n=6 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XIQ9_DIALT)

HSP 1 Score: 1337 bits (3459), Expect = 0.000e+0
Identity = 676/1189 (56.85%), Postives = 856/1189 (71.99%), Query Frame = 0
Query:   65 LHD---LLRPITAVEDKWRLLPVFLRMKGIARQHIDSFNYLLETEICNIVRANERITSDIDPRWYLKYESVHVGKPCITEDMMTTPLTPQECRLRDMTYSAPIYVDIKYARGPENVLCHK-LMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARG-VIANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIILRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQIQALLYLGKKAKTFKSPSFGSGHRGGFSSTRSTTQSLKTPSNTNSNGPPPHPRQKTIDHARELLAGVILAHVPVKHFNFWDKAIYIARMCRRVLLALDDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRITSKVAKERSRRRMSDGTDLGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENH---VVVLNGLFLGVHTQPHKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDMETGFPRVTDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIEPGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNKASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPVPEDPNYTTKDGKPRVHPVYGALDEDGIVAPGEQVSSGMIFVNKEVP-----RVGLTDAPGESNTVSYRPQGLRFKGAS--PVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYSGMSGEPLRAYVFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVFACKKCGLLGYKEWCQTCESGEKIGQLKIPYACKLLIQELQSMNVVPKLLL 1238
            LHD   + RPI +VEDKW+LLP FL+++G+ +QHIDSFN+ +  EI +I++ANE++T D DP ++L++  V VG P   EDM+ + + PQECRLRD+TYSAPI   ++Y RG + ++  + ++IG++PIMLRS+ C+L GKS  ELA++GECP+DPGGYFVV+G EKVIL+QEQLSKNRII+ KD +G V+A+V SSTHERKS+T L+  G  + L HN +  D+ + ++LRAMG+E+DQEI+QL+G EP +V+GM  +L E    G+ TQ +AL ++  K + F  P +GS  R                             Q  +D AR++LA V+LAHVPV  +NFW K +Y+ +M RR++ A  DPS +DD DYYGNKRLELAGQLLSLLFEDLFKKL  +LK+  D  + + T   A                       D  K  R DTIT G   AISTGNW+VKRFKMER+GVT+VLSRLSFISA+GMMTRI SQFEKTRKVSGPR+LQPSQWGMLCPSDTPEGEACGLVKNLAL THVTTDD+ A + RL  +LGV+  + L       N    +V +NG+ LG+H  P +  R LR LRR G +GE+VSV   P Q+TVH+A D GRV RPLI+V  E G P VT +H+ ++ +G+  W+D ++EGLIEYLDVNEEN++ IA YE D+    TTHLEI P TILG+CAGLIPYPHHNQSPRNTYQCAMGKQA+GAIA NQH R DT+LYLL YP +PLV+++ I ++GF +LP G NA + VMSYSGYDIEDA++LN+AS+DRG+GRCIV RK++A  +++AN   DRI+  P            R    +  LD DGI A GE++ SG IFVNK+VP      +  T+A   +   ++RP  + +KG        D+V+++SN++DH ++K+ +R TR PELGDKFSSRHGQKGVCGLIV  +DMPF+D G+ PD+IMNPHGFPSRMTVGKM+E +AGKA V +GH   GTAF GDKV+ CA  LV+ G+NY GKDFV SG++GEPL AYVF GPI+YQKLKHMV DKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLL ERL+ SSD F    C+KCGLL +   C+ C +      +++PYACKLL+QELQSMN+VP+L L
Sbjct:   18 LHDDGPIERPIGSVEDKWKLLPAFLKVRGLVKQHIDSFNHFVNVEIKHIIKANEKVTCDADPTFFLRFSDVTVGTPSAEEDMIVSEIKPQECRLRDITYSAPIIASLEYTRGKKEIVRRRGMVIGRMPIMLRSSKCVLHGKSAEELARVGECPIDPGGYFVVRGVEKVILIQEQLSKNRIIVGKDNKGKVMASVTSSTHERKSKTNLVTNGGAILLRHNTMTEDVPIVVVLRAMGVESDQEILQLIGMEPTYVEGMAASLREAVVLGVTTQAKALDFISHKVRGFSRP-WGSSMR-----------------------------QSRVDEARDVLANVVLAHVPVVAYNFWPKVVYVCQMLRRMISAQHDPSQIDDMDYYGNKRLELAGQLLSLLFEDLFKKLCAELKRQADAVLSKPTRAAA----------------------FDIAKCIRQDTITLGFSHAISTGNWSVKRFKMERSGVTQVLSRLSFISALGMMTRIMSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALTTHVTTDDDEAPIARLAMNLGVEDVHLLPGLDFGGNGRCTLVFINGMLLGMHRDPDRFVRSLRTLRRCGRLGEFVSVQLHPTQRTVHIAADAGRVCRPLIVV--EDGVPAVTPVHMSELAEGVRDWQDFIREGLIEYLDVNEENSSEIALYERDVH-ADTTHLEIDPLTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGAIACNQHERIDTILYLLVYPHQPLVKSRTIDLIGFSKLPAGHNAVVAVMSYSGYDIEDALILNRASLDRGFGRCIVMRKYSANLKKYANQTSDRIVAPPSATGAVKSVQLQR----FRVLDADGICAVGERLQSGDIFVNKQVPVNTSDTITNTEALAGAGAEAFRPSPMSYKGPPHHDTYIDRVMISSNENDHFVIKIRVRSTRSPELGDKFSSRHGQKGVCGLIVGHQDMPFNDFGMAPDIIMNPHGFPSRMTVGKMMELLAGKAAVLDGHLRYGTAFGGDKVDDCASVLVKHGFNYAGKDFVTSGITGEPLAAYVFFGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLNERLVHSSDGFIAHVCQKCGLLCHHLGCRNCRTSIHTQPMRLPYACKLLLQELQSMNIVPRLTL 1147          
BLAST of Gcaud10077.t1 vs. uniprot
Match: A0A6P8IST0_ACTTE (DNA-directed RNA polymerase subunit beta n=2 Tax=Actiniaria TaxID=6103 RepID=A0A6P8IST0_ACTTE)

HSP 1 Score: 1336 bits (3458), Expect = 0.000e+0
Identity = 687/1193 (57.59%), Postives = 860/1193 (72.09%), Query Frame = 0
Query:   58 QDKYPEQLHDLLRPITAVEDKWRLLPVFLRMKGIARQHIDSFNYLLETEICNIVRANERITSDIDPRWYLKYESVHVGKPCITEDM-MTTPLTPQECRLRDMTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARG-VIANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIILRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQIQALLYLGKKAKTFKSPSFGSGHRGGFSSTRSTTQSLKTPSNTNSNGPPPHPRQKTIDHARELLAGVILAHVPVKHFNFWDKAIYIARMCRRVLLALDDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRITSKVAKERSRRRMSDGTDLGRAIPRPN---IDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENHV--VVLNGLFLGVHTQPHKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDMETGFPRVTDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIEPGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNKASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPVPEDPNYTTKDGKPRVHPVYGALDEDGIVAPGEQVSSGMIFVNKEVPRVGLTD----APGESNTVSYRPQGLRFKGASPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYSGMSGEPLRAYVFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVFACKKCGLLGYKEWCQTCESGEKIGQLKIPYACKLLIQELQSMNVVPKLLLE 1239
            ++K  E + D+ RPI  V+DKW+LLP FL++KG+ +QHIDSFNY +  EI  I++ANE+IT+D D  WYLK+ +++VG P + E   +T P++P ECRLRDMTYSAPI VDI+Y RG + V+ + L IG++P+MLRS+NC+L GKS  ELA L ECP+DPGGYF+V G EKVIL+QEQLSKNR+I++ D +G V  +V SST ERK++T ++ KG K YL HN L  D+ V +I +AMG+E++QEI+Q+VG E   V   TP+L EC +  I+TQ+QAL Y+GKK +           R  +  +RS                        +D ARELLA V+LAH+PV  +N+  K +Y+A M RRV+LA  + + VDD+DYYGNKRLELAGQLLSLLFEDLFK+   +LKK  D                          + IPRP     D  K+ R D IT GL  AIS+GNW +KRF M RAGVT+VLSRLSFISA+GMMTRITSQFEKTRKVSGPR+LQPSQWGMLCPSDTPEGEACGLVKNLALMTH+TTD +   + RL Y+LGV+    LS E+ +   V  V LNGLFLGV     KL R  + +RR+G V E+VS+    + ++V++A DGGRV RP IIVD   G PRVTD H++++ +G   + D L EGL+EYLDVNEEN++ IA  E  +    TTHLEI P+T+LG+CAGLIPYPHHNQSPRNTYQCAMGKQA+G+I YNQ  R DTLLY L+YPQ PLV+TK I ++ F+++P GQNA++ VMSYSGYDIEDA+VLNKAS+DRG+GRC+V RK     +R+AN   DR+M     P+   + G+  V   +  LD DGI +PGE+V +  I +NK +P V  T      PG+     Y+   + +KG+  V  ++VL+TSN  +  L+K++LR+TRRPELGDKFSSRHGQKGVCGLIV+QEDMPF+D+GI PD+IMNPHGFPSRMTVGK+IE IAGKAGV EGH G GTAF GDKV+   + L+  G+NY GKD+V SG++GEPL AYVF GP++YQKLKHMV DKMHARA+GPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YGASMLL+ERLM+SSD F V  C +CGLLGY  WC  C+S   I  LKIPYACKLL QELQSMN+VP+L L+
Sbjct:    3 ENKEKESIEDIARPIKTVKDKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIIKANEKITTDADSVWYLKFLNIYVGTPDVEESFNITKPISPHECRLRDMTYSAPITVDIEYTRGQQRVVRNSLPIGRMPVMLRSSNCVLTGKSPAELALLNECPIDPGGYFIVNGTEKVILIQEQLSKNRMIVDTDRKGNVCCSVTSSTAERKTKTDIITKGGKFYLKHNTLTEDLPVVVIFKAMGLESEQEIVQMVGCEEDIVGNFTPSLEECHKLQIYTQLQALKYMGKKVRV----------RATWGKSRS-----------------------KVDEARELLAHVLLAHIPVHQYNYRTKCVYMALMIRRVILASANEAHVDDRDYYGNKRLELAGQLLSLLFEDLFKRFCGELKKIAD--------------------------QTIPRPRAAQFDIVKHMRQDLITNGLVHAISSGNWVIKRFNMNRAGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDQDEEPIIRLAYNLGVENVNLLSGEETSRASVYLVFLNGLFLGVIKDYKKLVRTFKLMRRAGYVNEFVSICPNHKLRSVNIAADGGRVCRPYIIVDK--GQPRVTDKHIKELNQGFRSFDDFLHEGLVEYLDVNEENDSEIALSEKHVTK-STTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGSIGYNQRNRIDTLLYFLAYPQVPLVRTKTIDLIHFDKIPAGQNATVAVMSYSGYDIEDALVLNKASVDRGFGRCLVYRKQVCTLKRYANQTFDRVM----GPSKDAQTGE--VIWRHRPLDADGIGSPGERVENKQILINKSMPVVTTTPLQSGTPGQPPQPEYKDVPISYKGSEGVYIERVLITSNPEEAFLIKMLLRQTRRPELGDKFSSRHGQKGVCGLIVNQEDMPFTDLGICPDIIMNPHGFPSRMTVGKLIELIAGKAGVLEGHFGYGTAFGGDKVDDICKELMNHGFNYAGKDYVTSGITGEPLTAYVFFGPVYYQKLKHMVLDKMHARAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLLIERLMISSDAFEVDVCGECGLLGYSGWCHYCKSSHNIASLKIPYACKLLFQELQSMNIVPRLSLK 1127          
BLAST of Gcaud10077.t1 vs. uniprot
Match: M2VX80_GALSU (DNA-directed RNA polymerase subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VX80_GALSU)

HSP 1 Score: 1335 bits (3454), Expect = 0.000e+0
Identity = 673/1184 (56.84%), Postives = 850/1184 (71.79%), Query Frame = 0
Query:   68 LLRPITAVEDKWRLLPVFLRMKGIARQHIDSFNYLLETEICNIVRANERITSDIDPRWYLKYESVHVGKPCITEDMMTTPLTPQECRLRDMTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARG-VIANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIILRAMGIETDQEIIQLVG---KEPRFVDGMTPTLHECAQEGIHTQIQALLYLGKKAKTFKSPSFGSGHRGGFSSTRSTTQSLKTPSNTNSNGPPPHPRQKTIDHARELLAGVILAHVPVKHFNFWDKAIYIARMCRRVLLALDDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRITSKVAKERSRRRMSDGTDLGRAIPRPN----IDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNE-NHV-VVLNGLFLGVHTQPHKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDMETGFPRVTDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIEPGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNKASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPVPEDPNYTTKDGKPRVHPVYGALDEDGIVAPGEQVSSGMIFVNKEVPRVGLTDAPGESNT--VSYRPQGLRFKGASPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYSGMSGEPLRAYVFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVFACKKCGLLGYKEWCQTCESGEKIGQLKIPYACKLLIQELQSMNVVPKLLLE 1239
            L +PI ++ +KW L+P FL+++G+ +QHI+SFN+L+E E+  IV AN+++T D D  +YL+Y  + VG P I ED++ + +TPQECRLRD+TY+APIYVD++Y RG E ++   + IG+IPIMLRS++CIL GK D +LA LGECPLDPGGYF+++G E+VIL+QEQLSKNRIIIE+D +G   A V SSTHERKSRT+L+ K N +YL HN L  DI + I+ +A+ +E+DQEI+QL+G   +E R    +     EC    +  + +AL Y+G + + F+          G+S  RS                       TI+ A+E+LAGVIL+H+P    NF +K+IY+A M RR+L   ++ + VDDKDYYGNKRLELAGQLLSLLFEDLFKK N DLK+  D                            + +PN     D  K  R DTI+ GLE AI TGNW VKRF+M RAG+T+VLSRLS+I+A+GMMTRITSQFEKTRK+SGPR+LQ SQWG+LCPSDTPEGE+CGLVKNLAL  H+TTD     L RL Y LGV+     S ++LN  +H  + LNG FLG+H          R LRR GA+GE+VS+F    +  V+++CD GR+ RPLIIV  E G P+VT  ++E++ +  + + DL+Q+GL+EYLDVNEENN LIA  E +IEP  TTHLEI+P  ILG+CAG+IPYPHHNQSPRNTYQCAMGKQAIG I YNQH+RTDTLLYLL+Y Q+PLV TK I  + ++ LPGGQNA + VMSYSGYDIEDA++LN++S+DRGYGRC V RKHA G RR+ NG CDR+   P     +  +   R H  +  L+EDG+   G ++S G  +V KE P   +T    + +   V YRPQ   +KG    + D+V++TSN   H L+KVM+RETR PE+GDKFSSRHGQKGVCGLIV QEDMPF++ GI PD+IMNPHGFPSRMTVGK++E +AGKAGV  G   +GTAF GD +E CA  LV+ G++Y GKDF+YSGM+GEPL+AYVF GPI+YQKLKHMVKDKMHARARGPRA+LTRQPTEGRSRDGGLRLGEMERDCLIGYGASML+MERLM SSD FT   C++CGL+  K+WC TC +  +I  LKIPYACKLL QELQSMN+ PK+LLE
Sbjct:   35 LRKPIKSIAEKWLLIPAFLKLRGLVKQHIESFNFLIEKELSKIVAANDKVTCDADQSFYLRYLGIRVGTPSIEEDLVISKVTPQECRLRDLTYAAPIYVDVRYTRGKEVLIRKDVAIGRIPIMLRSSHCILTGKKDGQLASLGECPLDPGGYFIIRGTERVILIQEQLSKNRIIIEEDKKGNYCATVTSSTHERKSRTSLVYKSNNIYLRHNSLVDDIPIWIVFKALEVESDQEIVQLIGLIEEEYRSYYFLLNHKKECISRHVQNRNEALEYIGSRVRLFRK---------GYSFRRS-----------------------TIEEAQEVLAGVILSHIPTYQHNFRNKSIYLAFMVRRLLTVAENLTTVDDKDYYGNKRLELAGQLLSLLFEDLFKKFNADLKRHADM--------------------------VLSKPNRAAQFDIVKCMRPDTISVGLENAIGTGNWTVKRFRMHRAGITQVLSRLSYIAALGMMTRITSQFEKTRKISGPRSLQGSQWGLLCPSDTPEGESCGLVKNLALTAHITTDAEEEPLIRLCYILGVEDATLFSGDELNNPSHFRIFLNGKFLGIHRNASYFANIFRFLRRKGAIGEFVSIFVNEAENVVYLSCDSGRICRPLIIV--ENGKPKVTQQYIEQLERNQLEFTDLVQQGLVEYLDVNEENNALIALSEENIEPCSTTHLEISPLAILGVCAGVIPYPHHNQSPRNTYQCAMGKQAIGFIGYNQHLRTDTLLYLLTYAQKPLVNTKTISFIKYDELPGGQNAIVAVMSYSGYDIEDALILNRSSLDRGYGRCCVVRKHAFGLRRYPNGTCDRVCRPP-----SFSESSERTHMKFACLEEDGLPKVGGRLSPGQAYVYKETPMDTMTTMTSQQSIQQVGYRPQPFFYKGPDDAVIDRVVVTSNASTHALIKVMIRETRTPEVGDKFSSRHGQKGVCGLIVPQEDMPFNEQGICPDIIMNPHGFPSRMTVGKLLELMAGKAGVLSGEFKNGTAFDGDPLEDCASLLVQHGFSYTGKDFLYSGMTGEPLQAYVFMGPIYYQKLKHMVKDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLIMERLMHSSDAFTAHVCRQCGLIVSKDWCPTCGNSLQIRPLKIPYACKLLFQELQSMNIWPKILLE 1153          
BLAST of Gcaud10077.t1 vs. uniprot
Match: UPI001CF4994B (DNA-directed RNA polymerase III subunit RPC2-like n=3 Tax=Astrocoeniina TaxID=123757 RepID=UPI001CF4994B)

HSP 1 Score: 1331 bits (3444), Expect = 0.000e+0
Identity = 681/1191 (57.18%), Postives = 850/1191 (71.37%), Query Frame = 0
Query:   60 KYPEQLHDLLRPITAVEDKWRLLPVFLRMKGIARQHIDSFNYLLETEICNIVRANERITSDIDPRWYLKYESVHVGKPCITEDM-MTTPLTPQECRLRDMTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVIA-NVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIILRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQIQALLYLGKKAKTFKSPSFGSGHRGGFSSTRSTTQSLKTPSNTNSNGPPPHPRQKTIDHARELLAGVILAHVPVKHFNFWDKAIYIARMCRRVLLALDDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRITSKVAKERSRRRMSDGTDLGRAIPRPN---IDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNEN--HVVVLNGLFLGVHTQPHKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDMETGFPRVTDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIEPGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNKASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPVPEDPNYTTKDGKPRVHPVYGALDEDGIVAPGEQVSSGMIFVNKEVPRVGLTD----APGESNTVSYRPQGLRFKGASPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYSGMSGEPLRAYVFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVFACKKCGLLGYKEWCQTCESGEKIGQLKIPYACKLLIQELQSMNVVPKLLLE 1239
            K  +   DL +PI  VEDKW+LLP FL++KG+ +QHIDSFNY +  +I  I+RANE+IT+D DP WYLKY +++VG P + E   +T P++P ECRLRDMTYSAPI VDI+Y RG + V+ H L IG++PIMLRS+NC+L GKS  ELA L ECP+DPGGYFV  G EKVIL+QEQLSKNRII+E D +G I  +V SST ERKSRT ++ KGNK  L HN L  D+ V ++ +AMGIE +QEI+QLVG E   +    P+L EC +  I++Q+QAL YLG K +                  R+T    +T                 ++ ARELLAGV+LAHVPV  ++F  K +++A M RRV+LA  D + VDD+DYYGNKRLELAGQLLSLLFEDLFK+ N +LKK  D                          + IP+P     D  K+ R D IT GL  AIS+GNW +KRF M RAGVT+VLSRLSFISA+GMMTR+ SQFEKTRKVSGPR+LQPSQWGMLCPSDTPEGEACGLVKNLALMTH+TTD +   + RL Y+LGV+    LS E+++    +VV LNG  LGV     +L    R +RR+G V E+VS+    + + V++A DGGRV RP IIV  + G P+V D H++++++G   ++D L EGL+EYLDVNEEN+  +A YE +I   +TTHLEI P+T+LG+CAGLIPYPHHNQSPRNTYQCAMGKQA+G+I YNQ  R DTLLY L YPQ PLV+TK I ++ F++LP GQNA++ VMSYSGYDIEDA++LNKAS+DRG+GRC+V RK     +R+AN   DR+M     P+     G+  V   + ALD DGI APGE++ +  + VNK +P V  T      PG+     Y+   + +KG   +  ++VL+TSN  +  L+K++ R+TRRPE+GDKFSSRHGQKGVCGLIV+QEDMPFSD+GI PD+IMNPHGFPSRMTVGK+IE +AGKAGV  GH G GTAF GDKVE    +LV  G+NY GK+FV SG++GEPL AY++ GP++YQKLKHMV DKMHARA+GPRA+LTRQPTEGRSRDGGLRLGEMERDCLI YG+SMLL+ERLM+SSD F V  C +CGL+GY  WC  C S   I  LKIPYACKLL QEL SMN+VP+L L+
Sbjct:    6 KINDNFEDLTKPIKTVEDKWKLLPAFLKVKGLVKQHIDSFNYFINVDIKKIMRANEKITTDADPVWYLKYLNIYVGSPDVEESFNITKPISPHECRLRDMTYSAPITVDIEYTRGKQRVVRHNLPIGRMPIMLRSSNCVLTGKSPAELAALNECPIDPGGYFVANGTEKVILIQEQLSKNRIIVEADKKGTIGCSVTSSTAERKSRTNIVTKGNKFCLKHNALSEDVPVVVVFKAMGIECEQEIVQLVGCEDDVISTFAPSLEECHKLHIYSQLQALQYLGSKVRQ-----------------RATWGKSRT----------------KVEEARELLAGVMLAHVPVIKYDFKPKCVFLALMVRRVILACSDEANVDDRDYYGNKRLELAGQLLSLLFEDLFKRFNNELKKIAD--------------------------QTIPKPRAAQFDIVKHMRQDQITNGLVHAISSGNWIIKRFNMHRAGVTQVLSRLSFISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDQDEEPIVRLAYNLGVENLRLLSGEEISHPSVYVVFLNGNILGVSGNYKRLVETFRLMRRAGYVNEFVSICPNHQHRFVNIASDGGRVCRPYIIV--KNGKPKVQDRHIQELVQGFRSFEDFLHEGLVEYLDVNEENDCSVALYEKEITR-ETTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGSIGYNQRNRIDTLLYFLCYPQVPLVRTKTIDLIQFDKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGFGRCLVYRKQNCLLKRYANQTFDRVM----GPSRDASTGE--VIWRHRALDADGICAPGERIENKQVLVNKSMPIVSPTGLQPGTPGQPPQPEYKDVPVSYKGPRDIYVERVLVTSNADEAFLIKILERQTRRPEIGDKFSSRHGQKGVCGLIVNQEDMPFSDLGICPDIIMNPHGFPSRMTVGKLIELMAGKAGVLHGHFGYGTAFGGDKVEDVCNALVEKGFNYVGKEFVTSGITGEPLTAYIYFGPVYYQKLKHMVLDKMHARAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGSSMLLLERLMISSDAFEVDVCSECGLMGYSGWCHYCSSSHNISTLKIPYACKLLFQELMSMNIVPRLSLK 1128          
The following BLAST results are available for this feature:
BLAST of Gcaud10077.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0M6_9FLOR0.000e+086.17DNA-directed RNA polymerase subunit beta n=1 Tax=G... [more]
R7QMZ9_CHOCR0.000e+073.67DNA-directed RNA polymerase subunit beta (Fragment... [more]
UPI001E1E13B70.000e+062.72LOW QUALITY PROTEIN: DNA-directed RNA polymerase I... [more]
A0A7S1XB87_9RHOD0.000e+060.13DNA-directed RNA polymerase subunit beta n=1 Tax=C... [more]
A0A1X6NUN4_PORUM0.000e+064.67DNA-directed RNA polymerase subunit beta n=1 Tax=P... [more]
A0A5J4YYN6_PORPP0.000e+058.91DNA-directed RNA polymerase subunit beta n=1 Tax=P... [more]
A0A8J5XIQ9_DIALT0.000e+056.85Uncharacterized protein n=6 Tax=Diacronema lutheri... [more]
A0A6P8IST0_ACTTE0.000e+057.59DNA-directed RNA polymerase subunit beta n=2 Tax=A... [more]
M2VX80_GALSU0.000e+056.84DNA-directed RNA polymerase subunit beta n=1 Tax=G... [more]
UPI001CF4994B0.000e+057.18DNA-directed RNA polymerase III subunit RPC2-like ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007647RNA polymerase Rpb2, domain 5PFAMPF04567RNA_pol_Rpb2_5coord: 726..760
e-value: 8.2E-10
score: 39.3
NoneNo IPR availableGENE3D3.90.1070.20coord: 612..691
e-value: 1.8E-14
score: 55.1
NoneNo IPR availableGENE3D3.90.1100.10coord: 84..242
e-value: 2.9E-28
score: 100.8
NoneNo IPR availableGENE3D3.90.1800.10RNA polymerase alpha subunit dimerisation domaincoord: 1139..1239
e-value: 1.3E-36
score: 126.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..381
NoneNo IPR availablePANTHERPTHR20856:SF8DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2coord: 72..1239
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 70..1239
IPR007120DNA-directed RNA polymerase, subunit 2, hybrid-binding domainPFAMPF00562RNA_pol_Rpb2_6coord: 774..1151
e-value: 9.5E-119
score: 396.9
IPR014724RNA polymerase Rpb2, OB-foldGENE3D2.40.50.150coord: 805..1000
e-value: 1.9E-142
score: 476.4
IPR007642RNA polymerase Rpb2, domain 2PFAMPF04561RNA_pol_Rpb2_2coord: 237..445
e-value: 1.0E-17
score: 64.4
IPR007645RNA polymerase Rpb2, domain 3PFAMPF04565RNA_pol_Rpb2_3coord: 544..607
e-value: 5.7E-19
score: 68.0
IPR007646RNA polymerase Rpb2, domain 4PFAMPF04566RNA_pol_Rpb2_4coord: 642..703
e-value: 3.7E-20
score: 71.9
IPR007644RNA polymerase, beta subunit, protrusionPFAMPF04563RNA_pol_Rpb2_1coord: 91..477
e-value: 1.3E-54
score: 185.4
IPR037034RNA polymerase Rpb2, domain 2 superfamilyGENE3D3.90.1110.10RNA polymerase Rpb2, domain 2coord: 243..435
e-value: 5.1E-42
score: 145.3
IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyGENE3D2.40.270.10coord: 775..1137
e-value: 1.9E-142
score: 476.4
IPR007641RNA polymerase Rpb2, domain 7PFAMPF04560RNA_pol_Rpb2_7coord: 1153..1238
e-value: 5.4E-32
score: 110.0
IPR015712DNA-directed RNA polymerase, subunit 2PANTHERPTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2coord: 72..1239
IPR015712DNA-directed RNA polymerase, subunit 2CDDcd00653RNA_pol_B_RPB2coord: 91..1236
e-value: 0.0
score: 1103.4
IPR007121RNA polymerase, beta subunit, conserved sitePROSITEPS01166RNA_POL_BETAcoord: 1004..1016

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_519_length_23177_cov_4.254700contigNODE_519_length_23177_cov_4.254700:1057..4782 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud10077.t1Gcaud10077.t1Gracilaria caudata M_176_S67 malemRNANODE_519_length_23177_cov_4.254700 1057..4782 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud10077.t1 ID=Gcaud10077.t1|Name=Gcaud10077.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1242bp
MKVKAEVRTTEPIHVHTPYIRQDRRKEVNADIGEDLRQHGRFPVHATPLY
SSNHHRSQDKYPEQLHDLLRPITAVEDKWRLLPVFLRMKGIARQHIDSFN
YLLETEICNIVRANERITSDIDPRWYLKYESVHVGKPCITEDMMTTPLTP
QECRLRDMTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKG
KSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVI
ANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIILRAMGIETDQE
IIQLVGKEPRFVDGMTPTLHECAQEGIHTQIQALLYLGKKAKTFKSPSFG
SGHRGGFSSTRSTTQSLKTPSNTNSNGPPPHPRQKTIDHARELLAGVILA
HVPVKHFNFWDKAIYIARMCRRVLLALDDPSAVDDKDYYGNKRLELAGQL
LSLLFEDLFKKLNTDLKKTIDTQIQRITSKVAKERSRRRMSDGTDLGRAI
PRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSF
ISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKN
LALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENHVVVLNGLFLG
VHTQPHKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLI
IVDMETGFPRVTDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIAT
YETDIEPGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAI
GAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVM
SYSGYDIEDAVVLNKASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPVP
EDPNYTTKDGKPRVHPVYGALDEDGIVAPGEQVSSGMIFVNKEVPRVGLT
DAPGESNTVSYRPQGLRFKGASPVICDKVLLTSNDHDHVLVKVMLRETRR
PELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTV
GKMIEFIAGKAGVFEGHCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVY
SGMSGEPLRAYVFSGPIFYQKLKHMVKDKMHARARGPRAMLTRQPTEGRS
RDGGLRLGEMERDCLIGYGASMLLMERLMVSSDEFTVFACKKCGLLGYKE
WCQTCESGEKIGQLKIPYACKLLIQELQSMNVVPKLLLEGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007647RNA_pol_Rpb2_5
IPR007120DNA-dir_RNAP_su2_dom
IPR014724RNA_pol_RPB2_OB-fold
IPR007642RNA_pol_Rpb2_2
IPR007645RNA_pol_Rpb2_3
IPR007646RNA_pol_Rpb2_4
IPR007644RNA_pol_bsu_protrusion
IPR037034RNA_pol_Rpb2_2_sf
IPR037033DNA-dir_RNAP_su2_hyb_sf
IPR007641RNA_pol_Rpb2_7
IPR015712DNA-dir_RNA_pol_su2
IPR007121RNA_pol_bsu_CS