Gcaud10071.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud10071.t1 vs. uniprot
Match: A0A2V3J2I6_9FLOR (tRNA pseudouridine synthase A, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2I6_9FLOR) HSP 1 Score: 171 bits (432), Expect = 1.800e-49 Identity = 79/124 (63.71%), Postives = 100/124 (80.65%), Query Frame = 0
Query: 9 EWLTVHIKGQSFMLHQIRKMLSLALLTALQRVPPDAISRSFRPDTFINIPPAPATGLFLNSCYFDWYNQRHAERLEQPLVLAPFDQQRELFKQQFIFPSIASREIEEDAMGIYFRTVEAYPITF 132
++L + ++GQSFMLHQIRKM+SLALLT L +VP DAI R+ P T +NIPPAP TGLFL+ C+FDWYN RHA L QPL L+ +D QRELFK+ +IFPSIA R +++D+M IYFRTVEA+P+ F
Sbjct: 250 QYLRIRVRGQSFMLHQIRKMVSLALLTCLHQVPSDAIPRALHPATLVNIPPAPPTGLFLDCCHFDWYNNRHAAVLPQPLSLSTYDAQRELFKRNYIFPSIARRAMQDDSMSIYFRTVEAHPVQF 373
BLAST of Gcaud10071.t1 vs. uniprot
Match: R7QMB7_CHOCR (PseudoU_synth_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMB7_CHOCR) HSP 1 Score: 146 bits (368), Expect = 6.100e-40 Identity = 67/123 (54.47%), Postives = 87/123 (70.73%), Query Frame = 0
Query: 10 WLTVHIKGQSFMLHQIRKMLSLALLTALQRVPPDAISRSFRPDTFINIPPAPATGLFLNSCYFDWYNQRHAERLEQPLVLAPFDQQRELFKQQFIFPSIASREIEEDAMGIYFRTVEAYPITF 132
W+ ++++GQSFMLHQIRKM+S A+L P D + +SF + IN+PPAPA GLFL+ C+F WYN+RH ERL +PL L F+ RE FK + IFPSIA R E+DA+ YFRT E +PI F
Sbjct: 252 WVRIYVRGQSFMLHQIRKMVSAAVLIHNSDAPEDTVQKSFEQNVLINVPPAPAVGLFLDCCHFRWYNERHKERLPEPLSLHSFESAREKFKHEHIFPSIARRAAEDDALEAYFRTAEKHPIQF 374
BLAST of Gcaud10071.t1 vs. uniprot
Match: PUS1_ASHGO (tRNA pseudouridine synthase 1 n=2 Tax=Eremothecium TaxID=33170 RepID=PUS1_ASHGO) HSP 1 Score: 92.0 bits (227), Expect = 3.990e-19 Identity = 47/120 (39.17%), Postives = 73/120 (60.83%), Query Frame = 0
Query: 9 EWLTVHIKGQSFMLHQIRKMLSLALLTALQRVPPDAISRSFRPDTFINIPPAPATGLFLNSCYFDWYNQRHAERLEQPLVLAPFDQQRELFKQQFIFPSIASREIEEDAMGIYFRTVEAY 128
EW+++ I GQSFMLHQIRKM+S+A L A P+ I++S+ P INIP APA GL L S ++ YN+R E +P+ + ++ + FK I+ I E++E+ +F ++A+
Sbjct: 337 EWVSIKIHGQSFMLHQIRKMISMATLVARCNCSPERIAQSYGPQK-INIPKAPALGLLLESPVYEGYNKRLLEFGYEPIDFRNYQKEMDTFKMVHIYDKIYKEEVDENVFNAFFNYIDAF 455
BLAST of Gcaud10071.t1 vs. uniprot
Match: A0A1G4M9L3_LACFM (LAFE_0C04324g1_1 n=1 Tax=Lachancea fermentati TaxID=4955 RepID=A0A1G4M9L3_LACFM) HSP 1 Score: 91.3 bits (225), Expect = 7.530e-19 Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = 0
Query: 9 EWLTVHIKGQSFMLHQIRKMLSLALLTALQRVPPDAISRSFRPDTFINIPPAPATGLFLNSCYFDWYNQRHAERLEQPLVLAPFDQQRELFKQQFIFPSIASREIEEDAMGIYFRTVEAY 128
EW+++ I GQSFMLHQIRKM+S+A L PP+ IS S+ P INIP APA GL L ++ YN+R E QP+ + + + + FK + I+ I E+ E+ +F ++++
Sbjct: 344 EWVSIKIHGQSFMLHQIRKMISMATLVTRCCCPPERISESYGPQK-INIPKAPALGLLLECPVYEGYNKRLEEFGYQPIDFSKYQDKMDSFKMKHIYDKIYQEEVNENVFNAFFSYIDSF 462
BLAST of Gcaud10071.t1 vs. uniprot
Match: A0A1Y2G763_9FUNG (Pseudouridine synthase n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2G763_9FUNG) HSP 1 Score: 90.5 bits (223), Expect = 1.110e-18 Identity = 48/127 (37.80%), Postives = 74/127 (58.27%), Query Frame = 0
Query: 2 PSRAQPVEWLTVHIKGQSFMLHQIRKMLSLALLTALQRVPPDAISRSFRPDTFINIPPAPATGLFLNSCYFDWYNQRHAERLEQPLVLAPFDQQRELFKQQFIFPSIASREIEEDAMGIYFRTVEAY 128
P Q EWL++ + GQSFMLHQIRKM+ L ++ P IS +F+ + INIP AP+ GL L FD YN++ + QP+V PF ++ E FK+++I+ I E+E + Y + ++ +
Sbjct: 288 PKMIQGTEWLSLKVHGQSFMLHQIRKMVGLIVMIIRTDTPLKLISETFKSNK-INIPKAPSLGLLLERPLFDTYNRKFQGK-HQPIVFDPFKEEMEAFKEKYIYEGIIKEELEFNRFDEYLQIMDGH 412
BLAST of Gcaud10071.t1 vs. uniprot
Match: A0A162N8G9_PHYB8 (PseudoU_synth_1 domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162N8G9_PHYB8) HSP 1 Score: 89.7 bits (221), Expect = 1.390e-18 Identity = 51/126 (40.48%), Postives = 75/126 (59.52%), Query Frame = 0
Query: 9 EWLTVHIKGQSFMLHQIRKMLSLALLTALQRVPPDAISRSFRPDTFINIPPAPATGLFLNSCYFDWYNQRHAER------LEQPLVLAPFDQQRELFKQQFIFPSIASREIEEDAMGIYFRTVEAY 128
EWL+V ++GQSFMLHQIRKM+S+A+LT + P I SF + INIP APA GL L FD +N+ + + +P+ P+ + E FKQ++I+ +I + E E + RTV+A+
Sbjct: 210 EWLSVKLQGQSFMLHQIRKMVSMAILTVRSKTPLKIIKNSF-DNVRINIPKAPAVGLLLERPVFDSFNKSLQMKDATFNAVREPVEFHPYKDEIEAFKQKWIYSTIFAAEAVERGFDTFLRTVDAH 334
BLAST of Gcaud10071.t1 vs. uniprot
Match: A7TTG9_VANPO (PseudoU_synth_1 domain-containing protein n=1 Tax=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) TaxID=436907 RepID=A7TTG9_VANPO) HSP 1 Score: 90.5 bits (223), Expect = 1.450e-18 Identity = 47/124 (37.90%), Postives = 73/124 (58.87%), Query Frame = 0
Query: 5 AQPVEWLTVHIKGQSFMLHQIRKMLSLALLTALQRVPPDAISRSFRPDTFINIPPAPATGLFLNSCYFDWYNQRHAERLEQPLVLAPFDQQRELFKQQFIFPSIASREIEEDAMGIYFRTVEAY 128
A EW+++ I GQSFMLHQIRKM+S+A L P IS+++ P INIP APA GL L S F+ YN+R + P+ + F ++ + FK + I+ I E++E+ +F ++++
Sbjct: 343 AAKTEWISIKIHGQSFMLHQIRKMISMATLVTRCGCPVSRISQAYGPQK-INIPKAPALGLLLESPVFEGYNKRLEKFGYNPIDFSKFQKEMDAFKMKHIYDKIYKEEVDENVFNAFFSYIDSF 465
BLAST of Gcaud10071.t1 vs. uniprot
Match: A0A1U8MNH0_GOSHI (tRNA pseudouridine synthase A, mitochondrial-like n=17 Tax=Gossypium TaxID=3633 RepID=A0A1U8MNH0_GOSHI) HSP 1 Score: 90.5 bits (223), Expect = 1.490e-18 Identity = 45/118 (38.14%), Postives = 72/118 (61.02%), Query Frame = 0
Query: 8 VEWLTVHIKGQSFMLHQIRKMLSLALLTALQRVPPDAISRSFRPDTFINIPPAPATGLFLNSCYFDWYNQRHAERLEQPLVLAPFDQQRELFKQQFIFPSIASREIEEDAMGIYFRTV 125
++++ + GQSFMLHQIRKM+ +A+ P I + R D +INIP AP GL+L+ C F YNQ+ + E+ L + ++++ E FK +FI+ IAS E EE +G++ ++
Sbjct: 433 IDFVKCEVVGQSFMLHQIRKMIGMAVAVMRGCAPESLIETALRKDVYINIPTAPEVGLYLDECLFSSYNQKWKDSHEE-LSMKAYEEEAEEFKMKFIYSHIASTEREEGVVGLWLHSL 549
BLAST of Gcaud10071.t1 vs. uniprot
Match: G7JGT4_MEDTR (tRNA pseudouridine synthase n=2 Tax=Medicago truncatula TaxID=3880 RepID=G7JGT4_MEDTR) HSP 1 Score: 89.4 bits (220), Expect = 1.690e-18 Identity = 45/118 (38.14%), Postives = 73/118 (61.86%), Query Frame = 0
Query: 8 VEWLTVHIKGQSFMLHQIRKMLSLALLTALQRVPPDAISRSFRPDTFINIPPAPATGLFLNSCYFDWYNQRHAERLEQPLVLAPFDQQRELFKQQFIFPSIASREIEEDAMGIYFRTV 125
+E++ I GQSFMLHQIRKM+ LA+ P I ++ + D I +P AP GL+L+ C+F YNQ+ + E+ + A ++++ E FK Q+I+P IAS E +E +G++ ++
Sbjct: 207 MEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKA-YEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSL 323
BLAST of Gcaud10071.t1 vs. uniprot
Match: G7JGU0_MEDTR (Putative pseudouridylate synthase, tRNA pseudouridine(38-40) synthase n=10 Tax=Trifolieae TaxID=163742 RepID=G7JGU0_MEDTR) HSP 1 Score: 89.4 bits (220), Expect = 3.570e-18 Identity = 45/118 (38.14%), Postives = 73/118 (61.86%), Query Frame = 0
Query: 8 VEWLTVHIKGQSFMLHQIRKMLSLALLTALQRVPPDAISRSFRPDTFINIPPAPATGLFLNSCYFDWYNQRHAERLEQPLVLAPFDQQRELFKQQFIFPSIASREIEEDAMGIYFRTV 125
+E++ I GQSFMLHQIRKM+ LA+ P I ++ + D I +P AP GL+L+ C+F YNQ+ + E+ + A ++++ E FK Q+I+P IAS E +E +G++ ++
Sbjct: 376 MEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKA-YEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSL 492 The following BLAST results are available for this feature:
BLAST of Gcaud10071.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud10071.t1 ID=Gcaud10071.t1|Name=Gcaud10071.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=134bpback to top |