Gcaud10024.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud10024.t1
Unique NameGcaud10024.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length178
Homology
BLAST of Gcaud10024.t1 vs. uniprot
Match: A0A2V3IDL6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDL6_9FLOR)

HSP 1 Score: 234 bits (596), Expect = 3.820e-76
Identity = 122/169 (72.19%), Postives = 137/169 (81.07%), Query Frame = 0
Query:   11 MAYKAMRRAVMEPIHDSRLREQAAKVYEAIGLSLPEERSEEQKMRPRSHGGFELISTFVPTPEAPKLNAVHGPLANKDDHMQLKKNVVGFPIPGAATEARMRAETPTGRSSAMQTEDDEYEQIADRPYFYPRRERRGGGIKKXXRERKTRNKIKSKDTT--AMQVEVAT 177
            MAYKAMRR+VMEPIHD++LREQA KVY+AIG+ LP ERS+EQKM PRSHGGFEL+STFVPTP+APKLN VHGPLA KDD M LKK VVGFPIP A  EARMRAE P  R   M  +D+EYE + +RPYFYPRRER+G GI+K  RERK R K +SK  T  AMQVEVAT
Sbjct:    1 MAYKAMRRSVMEPIHDAKLREQAEKVYKAIGMDLPGERSKEQKMPPRSHGGFELVSTFVPTPDAPKLNVVHGPLAYKDDKMTLKKEVVGFPIPCAGAEARMRAEIPAARRRTMDVDDEEYEDVTERPYFYPRRERQGVGIRKKRRERKQRVKKRSKPMTGSAMQVEVAT 169          
BLAST of Gcaud10024.t1 vs. uniprot
Match: R7QTR0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTR0_CHOCR)

HSP 1 Score: 196 bits (498), Expect = 4.370e-61
Identity = 103/167 (61.68%), Postives = 128/167 (76.65%), Query Frame = 0
Query:    1 MAKSKRSKVKMAYKAMRRAVMEPIHDSRLREQAAKVYEAIGLSLPEERSEEQKMRPRSHGGFELISTFVPTPEAPKLNAVHGPLANKDDHMQLKKNVVGFPIPGAATEARMRAETPTG--RSSAMQTEDDEYEQIADRPYFYPRRERRGGGIKKXXRER-KTRNKIK 164
            M KSKRSKVKMAYKAMRRAVMEP HD++LRE+AAKVYEAIGL LPEER+ E++M+PR HGG EL+STFV TP+ PKLN VHGP A  D  M++ K ++GFPI GA   A+MRAE P    R  A+  ++DE+EQ+   PYFYPRR R+ GGIKK  +++ KTR  ++
Sbjct:    1 MGKSKRSKVKMAYKAMRRAVMEPKHDAQLREKAAKVYEAIGLPLPEERTAEERMKPRMHGGSELVSTFVLTPKGPKLNVVHGPNAADDPLMRIPKGIIGFPIVGAGARAKMRAELPVPQKRVRAIDVDEDEFEQVEATPYFYPRRARKSGGIKKGRKQKQKTRKAVR 167          
BLAST of Gcaud10024.t1 vs. uniprot
Match: A0A7S3A3V1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3V1_9RHOD)

HSP 1 Score: 67.8 bits (164), Expect = 4.680e-11
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    1 MAKSKRSKVKMAYKAMRRAVMEPIHDSRLREQAAKVYEAIGLSLPEERSEEQKMRPRSHGGFELISTFVPTPEAPKLNAVHGPLA 85
            MAK  RSKVK AY+A++R  ME ++  +L ++ + +++  G        E++  R   HGG +L +TFVP  E PKLN VHGPLA
Sbjct:    1 MAKGLRSKVKRAYRALKREKMEGVYKKKLDDRVSSLHKKAGFEQAAVMEEDKPERIIRHGGVQLGTTFVPDHERPKLNVVHGPLA 85          
The following BLAST results are available for this feature:
BLAST of Gcaud10024.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IDL6_9FLOR3.820e-7672.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QTR0_CHOCR4.370e-6161.68Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3A3V1_9RHOD4.680e-1143.53Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_32_length_72862_cov_4.436877contigNODE_32_length_72862_cov_4.436877:26654..27187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud10024.t1Gcaud10024.t1Gracilaria caudata M_176_S67 malemRNANODE_32_length_72862_cov_4.436877 26654..27187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud10024.t1 ID=Gcaud10024.t1|Name=Gcaud10024.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=178bp
MAKSKRSKVKMAYKAMRRAVMEPIHDSRLREQAAKVYEAIGLSLPEERSE
EQKMRPRSHGGFELISTFVPTPEAPKLNAVHGPLANKDDHMQLKKNVVGF
PIPGAATEARMRAETPTGRSSAMQTEDDEYEQIADRPYFYPRRERRGGGI
KKKRRERKTRNKIKSKDTTAMQVEVAT*
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