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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Gcaud8438.t1.start1 | Gcaud8438.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_2836_length_4601_cov_3.731264 1331..1333 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Gcaud8438.t1.stop1 | Gcaud8438.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_2836_length_4601_cov_3.731264 3699..3701 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud8438.t1 ID=Gcaud8438.t1|Name=Gcaud8438.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=160bp
MGYNFNFQQSYNPYQQYLQAYMNTNASANDAGGSAGMPANAASPNAPGAG
GYDNSHGSGRLGYVAVQVDQRRTQAANIDREPLIDVANAGAEVGQLTESV
VGQVLFMQVERQTTVHEQLEARDRVAQRIVDKRHGEHHGGNVHNSESDEA
APVTRNDGL* back to topspliced messenger RNA >Gcaud8438.t1 ID=Gcaud8438.t1|Name=Gcaud8438.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=480bp|location=Sequence derived from alignment at NODE_2836_length_4601_cov_3.731264:1331..3701+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGCTACAACTTCAACTTCCAGCAGAGTTATAATCCGTACCAGCAGTA
TTTGCAAGCCTACATGAACACAAACGCTTCGGCGAATGACGCTGGTGGTA
GTGCGGGTATGCCCGCCAATGCCGCCTCGCCAAACGCTCCGGGCGCCGGA
GGATACGACAACTCACATggatccggaagGCTTGGATATGTTGCAGTACA
GGTCGACCAGCGAAGAACACAGGCGGCCAATATCGACAGGGAGCCTCTGA
TCGACGTTGCGAATGCGGGCGCCGAGGTTGGACAGCTTACAGAAAGTGTT
GTTGGCCAGGTACTTTTCATGCAAGTAGAGCGACAGACAACGGTGCATGA
GCAGCTTGAGGCGCGCGATAGAGTAGCGCAACGAATTGTTGACAAACGAC
ATGGGGAACATCATGGTGGCAATGTCCACAACAGCGAGTCGGATGAAGCT
GCGCCTGTCACGCGCAACGATGGCCTTTGA back to topprotein sequence of Gcaud8438.t1 >Gcaud8438.t1 ID=Gcaud8438.t1|Name=Gcaud8438.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=160bp
MGYNFNFQQSYNPYQQYLQAYMNTNASANDAGGSAGMPANAASPNAPGAG
GYDNSHGSGRLGYVAVQVDQRRTQAANIDREPLIDVANAGAEVGQLTESV
VGQVLFMQVERQTTVHEQLEARDRVAQRIVDKRHGEHHGGNVHNSESDEA
APVTRNDGL* back to topmRNA from alignment at NODE_2836_length_4601_cov_3.731264:1331..3701+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud8438.t1 ID=Gcaud8438.t1|Name=Gcaud8438.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2371bp|location=Sequence derived from alignment at NODE_2836_length_4601_cov_3.731264:1331..3701+ (Gracilaria caudata M_176_S67 male)
ATGGGCTACAACTTCAACTTCCAGCAGAGTTATAATCCGTACCAGCAGTA
TTTGCAAGCCTACATGAACACAAACGCTTCGGCGAATGACGCTGGTGGTA
GTGCGGGTATGCCCGCCAATGCCGCCTCGCCAAACGCTCCGGGCGCCGGA
GGTAAGCTTTCATTTGCATTTTTACTGGCGAGCGAACGCATCTGTTTGGA
CTTTGAAGAGAGAAAGATTTGTTTATTAATGAGTGTGACAAACAGCCTTG
GCTGCTTGCTTAGTCGAGCCGTGTGTGAGCCACACTTGTTTCCCTTTGCT
CCCAAGAGATGCTTGCGTAAGGTGATATCGTTTCGTCTGAGTCAATTTCG
AATACTAACCGAGGGGCTTTTGtgcgtttgtactgtttgtttcttttttg
cgttgctttgtttttgtgtgttgtgttctacctgttgttgtatgttTGCT
CGTTGAAACGATTGTTGTGATCACTTGCTTGCGTGATCCTTTTTACAATG
TTGTATGAATCTGTTCACTTGACTGCGATACAGGATACGACAACTCACAT
ggatccggaaggtacgggggtggacatggtggcggacacggtggaggcca
tggcggcggccatagctgcgacatcggtcacggtggacaaaacggtcatg
gctcgaacaacggtgcaggcggcccaagtaagaggcgttcctcacggcgg
gatgaccgaTATCACCCGAACCGCTAACAACGTGGACGGGCAGCACGCGG
TCATGGAACTCCCAAAGACTCGGCCGGTGGCTCACGCTGATCACAGTAAT
GCCCACCTCCTTCACCGCCTCGTACAGCGCCTTCTCCACGTCAATTGAAA
CCCTCGACGACGCCTCGTTAAGAATGGCGTGCTGCGGCGCATGGAACAGC
AGCCTGGTAAACGCCAGCCTCTGTTTCTGGCCGCCGCTCAAAACCTCCGC
CCAGTCGTTCACCGCGTCCAGTCCATCCCGTCGTCGTGCTTTGTCTCCCA
AATGCACTCTCTCCAACAACTGCATGATCAGCTCATCTGTCGCGCCACGT
GCCCTGGCCTCGCCCCAAGTCATCGGGTACGTCACGTTCTCGCGCAACGT
CCCTAACGCTAGATACGGCCGTTGCGGCACGTAGAAGATACGAGAGCGAG
CCGGACGGGAGATCGTGCCGCCATACACCGGCCGCAATCCCGCCAGAACG
CGGAATAACGAGCTCTTTCCGCACCCATTGGGCCCAGTGAGCACGTGACT
GCCGCGCTCCATCTTTAACGAAAGCCCTTCGCACAAAACCGTGCCGTCTG
GTGATACAATGTTCACCGCCTCGAAGCGTACACTACTCTCCCTTTCGTCT
TCGTCAGCCACAACCAGCTTCCCAGGCCGCATTAGATGCGCCAAATGCGC
ATCGTGTAAGAAATCGGAAGACGATTCGAACCGTCGTCGCAGTGCTCCCG
CGCGACACAGCTCGTCGAGCATGTGTTTCAGCCGAGAGACGCGATGCGTG
TATCCGGTGAGACGAGTCACCTCTTTTCCAGCGACCACCAGCCTTCAAAT
GGCTCCTGCCAACTGCAGTAGCAGACGAGAGTTCCTGGTGTACAGCCCGG
CAATCTTGGACGCTGATGTGGTCTCTGCATTCGCGTTGGCGGCGTTGTGA
CGCGCGCTATTTGCGGACGAGAACAGTCGGAACACTGACGACTACGTAAA
TAACACTGGCAATGAAACCACGAGGTATCCGACAATGGTGCGACGTACTT
GACCAGAACGGCAATCTACGAACCCGTTGCGCCAGCGAGCGGCGAAAAGC
TTGTTTAGGTGAGCCACCATGTTATCGAACGAGTGGTTGACGTACAACTC
CTCCCGGGCAGCGCCCCCAAAGAATGAGTAATGAGGCGCGAGTGGTGGAA
ACGGTTTTCGCCTCCCAGACGCTGCTCCTCGGCTGCGAGCTGTCCAAACG
GCGGCTGGATGGCGCGCAGAACGACGGAGCACGCTGCAAAATACTATATC
ATGCAGAGCGGGCCCGAGGGGCCCAGACTGCGAGCCAGGCGGCGACTGAA
CAGAACAATGTCGAAGACAGGCTTGGATATGTTGCAGTACAGGTCGACCA
GCGAAGAACACAGGCGGCCAATATCGACAGGGAGCCTCTGATCGACGTTG
CGAATGCGGGCGCCGAGGTTGGACAGCTTACAGAAAGTGTTGTTGGCCAG
GTACTTTTCATGCAAGTAGAGCGACAGACAACGGTGCATGAGCAGCTTGA
GGCGCGCGATAGAGTAGCGCAACGAATTGTTGACAAACGACATGGGGAAC
ATCATGGTGGCAATGTCCACAACAGCGAGTCGGATGAAGCTGCGCCTGTC
ACGCGCAACGATGGCCTTTGA back to topCoding sequence (CDS) from alignment at NODE_2836_length_4601_cov_3.731264:1331..3701+ >Gcaud8438.t1 ID=Gcaud8438.t1|Name=Gcaud8438.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=480bp|location=Sequence derived from alignment at NODE_2836_length_4601_cov_3.731264:1331..3701+ (Gracilaria caudata M_176_S67 male)
ATGGGCTACAACTTCAACTTCCAGCAGAGTTATAATCCGTACCAGCAGTA
TTTGCAAGCCTACATGAACACAAACGCTTCGGCGAATGACGCTGGTGGTA
GTGCGGGTATGCCCGCCAATGCCGCCTCGCCAAACGCTCCGGGCGCCGGA
GGATACGACAACTCACATggatccggaagGCTTGGATATGTTGCAGTACA
GGTCGACCAGCGAAGAACACAGGCGGCCAATATCGACAGGGAGCCTCTGA
TCGACGTTGCGAATGCGGGCGCCGAGGTTGGACAGCTTACAGAAAGTGTT
GTTGGCCAGGTACTTTTCATGCAAGTAGAGCGACAGACAACGGTGCATGA
GCAGCTTGAGGCGCGCGATAGAGTAGCGCAACGAATTGTTGACAAACGAC
ATGGGGAACATCATGGTGGCAATGTCCACAACAGCGAGTCGGATGAAGCT
GCGCCTGTCACGCGCAACGATGGCCTTTGA back to top
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