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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005706311.1 |
| Preferred name | MSC7 |
| PFAMs | Aldedh |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 |
| KEGG ko | ko:K00128,ko:K10661 |
| KEGG Reaction | R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 |
| KEGG Pathway | ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,ko04141,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130,map04141 |
| KEGG Module | M00135 |
| GOs | GO:0000003,GO:0000280,GO:0003674,GO:0003824,GO:0004029,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016491,GO:0016620,GO:0016903,GO:0022402,GO:0022414,GO:0031224,GO:0034641,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0046483,GO:0048285,GO:0051321,GO:0055114,GO:0061982,GO:0071704,GO:0071840,GO:0090304,GO:0140013,GO:1901360,GO:1903046 |
| Evalue | 4.26e-171 |
| EggNOG OGs | COG1012@1|root,KOG2454@2759|Eukaryota |
| EC | 1.2.1.3,2.3.2.27 |
| Description | aldehyde dehydrogenase (NAD) activity |
| COG category | C |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko04121 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud8033.t1.stop1 | Gcaud8033.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_47_length_66049_cov_4.331180 61722..61724 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud8033.t1.start1 | Gcaud8033.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_47_length_66049_cov_4.331180 64351..64353 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud8033.t1 ID=Gcaud8033.t1|Name=Gcaud8033.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=688bp MLEQLRSLENSLASWLDRLAAALRTQPLSSTCQALAPDTASLLQRLDHIV ETPLLAIPCAFVIALTFVFTLPSVLSFFNSDPILAQVPFPSDKFDPYEDP DIDHLPDEDVRPQLCDQFTPNAIPCYAPATSEVLGYVQGHDPQDVDRLVQ AARDAQQSWQNTSFEQRKKVMRVLRDYLLFYQKELSHLSHADTGKPVLDA CIGEILPTLEKIRWLISSGEAALRPDPRETGPVTRHKTALLHFMPLGVIG AIAPWNYPLHNFFNPVLAALFSGNAVVVKPSEHTLYSSLHFVRIVRRVLI TCGHSPQLVQLLLGEAEIGQALVDAPIDKLFFTGSTAVGRQVAERTAQRL LPVCLELGGKDAFVICQDANVKHAATICMRGVFQNSGQNCIGIERVYVHE DVKDKFLRIVLPMVESLRIGTDIGAMTLGENAQKKIEKLVEDAVQKGAKL LTGGSRTTVDGVGTFFQPTVLKDVTAKMEIANEEVFGPVMTVFAWNDDEQ LVRMINDCQFGLGSSVFSGNTRRAQSIISKLRVGMSNVNDFATNYLCQSM PFGGTKQSGSDRFAGIEGLRGCCILKAVTHDRFPGIKTTIPKAFKYPTGT NAFELAAEINDFMYGRGLLSKVDNFRNLMGMILFPSWRPRASARVAPMAT IAFGKKKHATSIDADAELSCCTFIFVSSNSKSMKGFW* back to topspliced messenger RNA >Gcaud8033.t1 ID=Gcaud8033.t1|Name=Gcaud8033.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2064bp|location=Sequence derived from alignment at NODE_47_length_66049_cov_4.331180:61722..64353- (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTTGGAGCAGCTGCGCTCCCTCGAGAACTCCCTCGCCTCCTGGCTAGA CCGGCTCGCCGCAGCCCTGCGCACCCAACCGCTCTCCTCCACCTGCCAAG CTCTCGCTCCAGATACCGCCTCACTCCTCCAGAGGCTCGATCACATCGTC GAAACGCCATTGCTGGCCATCCCGTGCGCCTTCGTCATCGCCCTCACCTT CGTGTTCACCCTCCCGTCCGTCCTCTCTTTCTTCAATTCCGATCCAATTC TCGCTCAAGTTCCCTTCCCCTCCGACAAATTCGATCCCTATGAAGACCCC GACATAGACCATCTACCGGACGAAGACGTTCGACCACAGCTGTGCGACCA ATTCACCCCCAACGCCATCCCGTGCTACGCGCCGGCCACATCCGAAGTGC TCGGCTACGTGCAAGGCCACGATCCGCAGGATGTCGATCGTCTCGTGCAA GCCGCGCGAGACGCGCAGCAATCCTGGCAGAACACCTCTTTTGAGCAACG CAAAAAGGTCATGCGCGTGCTCCGTGACTACCTGCTTTTCTACCAGAAAG AGCTCAGCCATCTCTCTCATGCGGATACTGGGAAGCCCGTGTTGGATGCA TGCATCGGCGAAATCTTGCCCACACTTGAGAAGATCAGGTGGTTGATATC TTCTGGCGAGGCTGCATTGCGTCCGGACCCGCGAGAAACAGGCCCTGTTA CTAGGCATAAGACTGCTCTTCTGCATTTTATGCCGCTTGGGGTCATTGGT GCCATCGCTCCGTGGAACTATCCTCTGCACAACTTCTTCAACCCGGTGCT CGCCGCTCTGTTTTCGGGCAATGCCGTTGTCGTCAAGCCGAGTGAACACA CTCTCTATTCGTCGCTTCATTTTGTTCGCATTGTGCGAAGAGTGCTCATT ACGTGCGGTCATTCGCCGCAGCTTGTGCAGCTACTTCTTGGAGAAGCCGA GATTGGCCAAGCCCTAGTCGATGCCCCAATCGACAAGCTGTTTTTCACCG GCTCCACCGCTGTTGGGCGCCAGGTCGCGGAACGCACCGCACAACGTTTG CTGCCGGTGTGCCTTGAACTAGGAGGCAAAGATGCGTTTGTTATATGTCA AGACGCCAATGTGAAGCACGCAGCTACCATATGCATGCGCGGTGTATTCC AAAACTCTGGGCAAAACTGCATCGGCATTGAGCGTGTGTATGTACATGAA GACGTCAAGGACAAGTTTCTGCGAATTGTTCTTCCCATGGTCGAATCCCT GCGCATTGGAACCGATATTGGTGCCATGACTTTGGGTGAAAATGCGCAGA AGAAGATAGAGAAACTGGTGGAGGACGCCGTGCAAAAGGGTGCCAAGTTA CTGACCGGTGGATCACGCACCACTGTTGATGGGGTAGGTACTTTCTTTCA GCCGACGGTGCTCAAGGATGTGACTGCAAAAATGGAAATTGCCAATGAAG AGGTTTTTGGTCCGGTAATGACCGTCTTTGCGTGGAACGATGACGAACAG CTTGTGCGAATGATCAACGACTGTCAGTTTGGTTTGGGCTCCTCAGTGTT TTCCGGGAATACCAGGAGAGCTCAATCAATAATCTCCAAATTGCGAGTAG GTATGTCGAATGTAAACGACTTTGCTACAAACTACTTGTGCCAAAGTATG CCTTTCGGCGGCACAAAGCAGAGTGGTTCTGATCGCTTTGCTGGTATTGA AGGGCTTCGAGGATGTTGTATTTTGAAAGCCGTAACACACGACCGTTTTC CTGGTATCAAGACAACCATCCCCAAGGCTTTCAAATACCCAACTGGAACT AACGCGTTTGAGCTTGCAGCCGAAATTAATGACTTTATGTACGGGAGAGG TCTCCTGTCAAAGGTTGACAACTTTCGTAATCTCATGGGCATGATTCTGT TTCCTTCGTGGAGGCCCAGAGCGAGTGCGAGAGTAGCACCTATGGCAACT ATTGCATTTGGCAAGAAGAAACATGCGACCTCCATCGACGCAGATGCAGA ACTGTCCTGTTGTACTTTCATATTCGTTAGTTCAAACTCGAAGTCAATGA AAGGGTTTTGGTAA back to topprotein sequence of Gcaud8033.t1 >Gcaud8033.t1 ID=Gcaud8033.t1|Name=Gcaud8033.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=688bp
MLEQLRSLENSLASWLDRLAAALRTQPLSSTCQALAPDTASLLQRLDHIV ETPLLAIPCAFVIALTFVFTLPSVLSFFNSDPILAQVPFPSDKFDPYEDP DIDHLPDEDVRPQLCDQFTPNAIPCYAPATSEVLGYVQGHDPQDVDRLVQ AARDAQQSWQNTSFEQRKKVMRVLRDYLLFYQKELSHLSHADTGKPVLDA CIGEILPTLEKIRWLISSGEAALRPDPRETGPVTRHKTALLHFMPLGVIG AIAPWNYPLHNFFNPVLAALFSGNAVVVKPSEHTLYSSLHFVRIVRRVLI TCGHSPQLVQLLLGEAEIGQALVDAPIDKLFFTGSTAVGRQVAERTAQRL LPVCLELGGKDAFVICQDANVKHAATICMRGVFQNSGQNCIGIERVYVHE DVKDKFLRIVLPMVESLRIGTDIGAMTLGENAQKKIEKLVEDAVQKGAKL LTGGSRTTVDGVGTFFQPTVLKDVTAKMEIANEEVFGPVMTVFAWNDDEQ LVRMINDCQFGLGSSVFSGNTRRAQSIISKLRVGMSNVNDFATNYLCQSM PFGGTKQSGSDRFAGIEGLRGCCILKAVTHDRFPGIKTTIPKAFKYPTGT NAFELAAEINDFMYGRGLLSKVDNFRNLMGMILFPSWRPRASARVAPMAT IAFGKKKHATSIDADAELSCCTFIFVSSNSKSMKGFW* back to topmRNA from alignment at NODE_47_length_66049_cov_4.331180:61722..64353- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud8033.t1 ID=Gcaud8033.t1|Name=Gcaud8033.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2632bp|location=Sequence derived from alignment at NODE_47_length_66049_cov_4.331180:61722..64353- (Gracilaria caudata M_176_S67 male) ATGTTGGAGCAGCTGCGCTCCCTCGAGAACTCCCTCGCCTCCTGGCTAGA
CCGGCTCGCCGCAGCCCTGCGCACCCAACCGCTCTCCTCCACCTGCCAAG
CTCTCGCTCCAGATACCGCCTCACTCCTCCAGAGGCTCGATCACATCGTC
GAAACGCCATTGCTGGCCATCCCGTGCGCCTTCGTCATCGCCCTCACCTT
CGTGTTCACCCTCCCGTCCGTCCTCTCTTTCTTCAATTCCGATCCAATTC
TCGCTCAAGTTCCCTTCCCCTCCGACAAATTCGATCCCTATGAAGACCCC
GACATAGACCATCTACCGGACGAAGACGTTCGACCACAGCTGTGCGACCA
ATTCACCCCCAACGCCATCCCGTGCTACGCGCCGGCCACATCCGAAGTGC
TCGGCTACGTGCAAGGCCACGATCCGCAGGATGTCGATCGTCTCGTGCAA
GCCGCGCGAGACGCGCAGCAATCCTGGCAGAACACCTCTTTTGAGCAACG
CAAAAAGGTCATGCGCGTGCTCCGTGACTACCTGCTTTTCTACCAGAAAG
AGCTCAGCCATCTCTCTCATGCGGATACTGGGAAGCCCGTGTTGGATGCA
TGCATCGGCGAAATCTTGCCCACACTTGAGAAGATCAGGTGGTTGATATC
TTCTGGCGAGGCTGCATTGCGTCCGGACCCGCGAGAAACAGGCCCTGTTA
CTAGGCATAAGACTGCTCTTCTGCATTTTATGCCGCTTGGGGTCATTGGT
GCCATCGCTCCGTGGAACTATCCTCTGCACAACTTCTTCAACCCGGTGCT
CGCCGCTCTGTTTTCGGGCAATGCCGTTGTCGTCAAGCCGAGTGAACACA
CTCTCTATTCGTCGCTTCATTTTGTTCGCATTGTGCGAAGAGTGCTCATT
ACGTGCGGTCATTCGCCGCAGCTTGTGCAGCTACTTCTTGGAGAAGCCGA
GATTGGCCAAGCCCTAGTCGATGCCCCAATCGACAAGCTGTTTTTCACCG
GCTCCACCGCTGTTGGGCGCCAGGTCGCGGAACGCACCGCACAACGTTTG
CTGCCGGTGTGCCTTGAACTAGGAGGCAAAGATGCGTTTGTTATATGTCA
AGACGCCAATGTGAAGCACGCAGCTACCATATGCATGCGCGGTGTATTCC
AAAACTCTGGGCAAAACTGCATCGGCATTGAGCGTGTGTATGTACATGAA
GACGTCAAGGACAAGTTTCTGCGAATTGTTCTTCCCATGGTCGAATCCCT
GCGCATTGGAACCGATATTGGTGCCATGACTTTGGGTGAAAATGCGCAGA
AGAAGATAGAGAAACTGGTGGAGGACGCCGTGCAAAAGGGTGCCAAGTTA
CTGACCGGTGGATCACGCACCACTGTTGATGGGGTAGGTACTTTCTTTCA
GCCGACGGTGCTCAAGGATGTGACTGCAAAAATGGAAATTGCCAATGAAG
AGGTTTTTGGTCCGGTAATGACCGTCTTTGCGTGGAACGATGACGAACAG
CTTGTGCGAATGATCAACGACTGTCAGTTTGGTTTGGGCTCCTCAGTGTT
TTCCGGGAATACCAGGAGAGCTCAATCAATAATCTCCAAATTGCGAGTAG
GTATGTCGAATGTAAACGACTTTGCTACAAACTACTTGTGCCAAAGTATG
CCTTTCGGCGGCACAAAGCAGAGTGGTTCTGATCGCTTTGCTGGTATTGA
AGGGCTTCGAGGATGTTGTATTTTGAAAGCCGTAACACACGACCGTTTTC
CTGGTATCAAGACAACCATCCCCAAGGCTTTCAAATACCCAACTGGAACT
AACGCGTTTGAGCTTGCAGCCGAAATTAATGACTTTATGTACGGGAGAGG
TCTCCTGTCAAAGGTTGACAACTTTCGTAATCTCATGGGCATGATTCTGT
TTCCTTCGTGGAGGCCCAGAGCGGTTGGTAGCGGGTAACAGTCAAGGAAG
CCCTTTACCAACTAATCAACTTTTGAAGGGCTTTTGCGCCCACCGCATGT
CAACTTGCAGATTCTGCAATGCAGAAGCGTGGATCTAAAAGAAGTGAAAA
AGTGTTGTTCAGAAACCTTTAATGGTACAGAGTGCGAGAGTAGCACCTAT
GGCAACTATTGCATTTGGCAAGAAGAAACATGCGACCTCCATCGACGCAG
ATGCAGAACTGTCCTGTTGTACTTTCATATTCGTTAGTTCAAACTCGAAG
TCAATGAAAGGGGTAAGTTATTCGTTCAAAGAACAATTGGCGCTTGGGTT
TCCCCATTGTCCGCGAAATCGATGTAATATGAGAAATAAATGCTATTCGG
TATATGGGCGTTGAGTCAAAGGTTAGTTCACCACATTCATGAAGAATGCT
GGGGAGCCCCACAGTTCGAGAAGTTGCAGAAGCGTTTGCCTTAAAAACAT
GGCCCATGGACATCAGGTAGTAATCTAACCTTAGTGCCCTGAGACCAAGC
TTCGGTTCATGTGCAATAGGGCCACAGGAAGAAAGCGTGTTCCCTCACTG
CTAATTCGGGATAAATGATGTTCTTCACCTCCTGTCCCGATTTGCTTATG
GTTCCATACCTGTCTCAATGTTCTTTTGGCTCGCAACTTGATCAACGACT
AACATTCTCTCACAATGATTCAGTTTTGGTAA back to topCoding sequence (CDS) from alignment at NODE_47_length_66049_cov_4.331180:61722..64353- >Gcaud8033.t1 ID=Gcaud8033.t1|Name=Gcaud8033.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=2064bp|location=Sequence derived from alignment at NODE_47_length_66049_cov_4.331180:61722..64353- (Gracilaria caudata M_176_S67 male) ATGTTGGAGCAGCTGCGCTCCCTCGAGAACTCCCTCGCCTCCTGGCTAGA CCGGCTCGCCGCAGCCCTGCGCACCCAACCGCTCTCCTCCACCTGCCAAG CTCTCGCTCCAGATACCGCCTCACTCCTCCAGAGGCTCGATCACATCGTC GAAACGCCATTGCTGGCCATCCCGTGCGCCTTCGTCATCGCCCTCACCTT CGTGTTCACCCTCCCGTCCGTCCTCTCTTTCTTCAATTCCGATCCAATTC TCGCTCAAGTTCCCTTCCCCTCCGACAAATTCGATCCCTATGAAGACCCC GACATAGACCATCTACCGGACGAAGACGTTCGACCACAGCTGTGCGACCA ATTCACCCCCAACGCCATCCCGTGCTACGCGCCGGCCACATCCGAAGTGC TCGGCTACGTGCAAGGCCACGATCCGCAGGATGTCGATCGTCTCGTGCAA GCCGCGCGAGACGCGCAGCAATCCTGGCAGAACACCTCTTTTGAGCAACG CAAAAAGGTCATGCGCGTGCTCCGTGACTACCTGCTTTTCTACCAGAAAG AGCTCAGCCATCTCTCTCATGCGGATACTGGGAAGCCCGTGTTGGATGCA TGCATCGGCGAAATCTTGCCCACACTTGAGAAGATCAGGTGGTTGATATC TTCTGGCGAGGCTGCATTGCGTCCGGACCCGCGAGAAACAGGCCCTGTTA CTAGGCATAAGACTGCTCTTCTGCATTTTATGCCGCTTGGGGTCATTGGT GCCATCGCTCCGTGGAACTATCCTCTGCACAACTTCTTCAACCCGGTGCT CGCCGCTCTGTTTTCGGGCAATGCCGTTGTCGTCAAGCCGAGTGAACACA CTCTCTATTCGTCGCTTCATTTTGTTCGCATTGTGCGAAGAGTGCTCATT ACGTGCGGTCATTCGCCGCAGCTTGTGCAGCTACTTCTTGGAGAAGCCGA GATTGGCCAAGCCCTAGTCGATGCCCCAATCGACAAGCTGTTTTTCACCG GCTCCACCGCTGTTGGGCGCCAGGTCGCGGAACGCACCGCACAACGTTTG CTGCCGGTGTGCCTTGAACTAGGAGGCAAAGATGCGTTTGTTATATGTCA AGACGCCAATGTGAAGCACGCAGCTACCATATGCATGCGCGGTGTATTCC AAAACTCTGGGCAAAACTGCATCGGCATTGAGCGTGTGTATGTACATGAA GACGTCAAGGACAAGTTTCTGCGAATTGTTCTTCCCATGGTCGAATCCCT GCGCATTGGAACCGATATTGGTGCCATGACTTTGGGTGAAAATGCGCAGA AGAAGATAGAGAAACTGGTGGAGGACGCCGTGCAAAAGGGTGCCAAGTTA CTGACCGGTGGATCACGCACCACTGTTGATGGGGTAGGTACTTTCTTTCA GCCGACGGTGCTCAAGGATGTGACTGCAAAAATGGAAATTGCCAATGAAG AGGTTTTTGGTCCGGTAATGACCGTCTTTGCGTGGAACGATGACGAACAG CTTGTGCGAATGATCAACGACTGTCAGTTTGGTTTGGGCTCCTCAGTGTT TTCCGGGAATACCAGGAGAGCTCAATCAATAATCTCCAAATTGCGAGTAG GTATGTCGAATGTAAACGACTTTGCTACAAACTACTTGTGCCAAAGTATG CCTTTCGGCGGCACAAAGCAGAGTGGTTCTGATCGCTTTGCTGGTATTGA AGGGCTTCGAGGATGTTGTATTTTGAAAGCCGTAACACACGACCGTTTTC CTGGTATCAAGACAACCATCCCCAAGGCTTTCAAATACCCAACTGGAACT AACGCGTTTGAGCTTGCAGCCGAAATTAATGACTTTATGTACGGGAGAGG TCTCCTGTCAAAGGTTGACAACTTTCGTAATCTCATGGGCATGATTCTGT TTCCTTCGTGGAGGCCCAGAGCGAGTGCGAGAGTAGCACCTATGGCAACT ATTGCATTTGGCAAGAAGAAACATGCGACCTCCATCGACGCAGATGCAGA ACTGTCCTGTTGTACTTTCATATTCGTTAGTTCAAACTCGAAGTCAATGA AAGGGTTTTGGTAA back to top
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