Gcaud8007.t1 (mRNA) Gracilaria caudata M_176_S67 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGcaud8007.t1
Unique NameGcaud8007.t1
TypemRNA
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1585
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_831_length_17362_cov_4.155231contigNODE_831_length_17362_cov_4.155231:5555..10309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog32264.tetur16g00260.1
Preferred nameUGGT1
PFAMsGlyco_transf_8,UDP-g_GGTase
Max annot lvl33208|Metazoa
KEGG koko:K11718
KEGG Pathwayko04141,map04141
GOsGO:0003674,GO:0003824,GO:0003980,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005788,GO:0005791,GO:0005793,GO:0006011,GO:0006139,GO:0006457,GO:0006458,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006515,GO:0006517,GO:0006725,GO:0006793,GO:0006807,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008194,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0023052,GO:0030163,GO:0030968,GO:0031967,GO:0031974,GO:0031975,GO:0032991,GO:0033554,GO:0034620,GO:0034641,GO:0034645,GO:0034976,GO:0035251,GO:0035966,GO:0035967,GO:0036211,GO:0036503,GO:0036507,GO:0036508,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045995,GO:0046483,GO:0046527,GO:0048580,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051239,GO:0051603,GO:0051716,GO:0051788,GO:0055086,GO:0061062,GO:0065007,GO:0070013,GO:0070085,GO:0070887,GO:0071218,GO:0071310,GO:0071704,GO:0071712,GO:0097359,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1904380,GO:2000026
Evalue1e-149
EggNOG OGsKOG1879@1|root,KOG1879@2759|Eukaryota,38FK5@33154|Opisthokonta,3BFCU@33208|Metazoa,3CR8P@33213|Bilateria,41TBM@6656|Arthropoda
DescriptionUDP-glucose glycoprotein glucosyltransferase activity. It is involved in the biological process described with protein glycosylation
COG categoryG
CAZyGT24
BRITEko00000,ko00001,ko01000,ko01003
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8007Gcaud8007Gracilaria caudata M_176_S67 malegeneNODE_831_length_17362_cov_4.155231 5555..10309 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud8007.t1.start1Gcaud8007.t1.start1Gracilaria caudata M_176_S67 malestart_codonNODE_831_length_17362_cov_4.155231 5555..5557 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud8007.t1.CDS1Gcaud8007.t1.CDS1Gracilaria caudata M_176_S67 maleCDSNODE_831_length_17362_cov_4.155231 5555..10309 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud8007.t1.exon1Gcaud8007.t1.exon1Gracilaria caudata M_176_S67 maleexonNODE_831_length_17362_cov_4.155231 5555..10309 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud8007.t1.stop1Gcaud8007.t1.stop1Gracilaria caudata M_176_S67 malestop_codonNODE_831_length_17362_cov_4.155231 10307..10309 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud8007.t1Gcaud8007.t1Gracilaria caudata M_176_S67 malepolypeptideNODE_831_length_17362_cov_4.155231 5555..10309 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gcaud8007.t1 ID=Gcaud8007.t1|Name=Gcaud8007.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1585bp
MAASRCVALRVALFVATLLVSAAVADRSLHVGLHASWRATRVSSEALSWL
VRTFSPNVVSSFTTRFCSAASDVWTFTDRELTERWDHFCTMSAVSPLLQE
GNVEGHTLEWLLNARVFSPFVSMHYAVAESVLSRFGQSLRDAPAVFVVDA
DASRRNAVLITDPQRLSDCDDCPTITSQEPLSFLQPITPEIVLSPHARAP
RMRFVFADTASSQFCEWFTTLQPLIQQPSHRTILRFWSPSTVAYKPGLQA
FTVHATLKSTEYKVVDDRVFETKLFPDCGYADAPCGSASHLNHSVAWTNT
EQPPSYTSLQALQYIAHDTSGNTAAMLTKLRVFAEDTPSVVRSQEYRDGA
FVNPKVEMQLYRKVTRLRAAIGDRQYLFINGRSFPPRSLLHGSDKLFRCL
SSIATASANAPQLFKHGTERATMFGDFHAMQRNPDASLRVDLRLEELTPS
ALVHLNDMQTDSRYKKWKTLDLTSMDDVKDFVHDAEMRQVMTSTSLRQRH
TDLIKVKADHLSLFLLVDPGDTQQFGFMSIPRSVIHADLPIHVSMLLVPN
GRTSSLVAAGFHYLLRLKGRKTAVKFLTMIMEILEYIGAFQPVTLSSEIV
EMSYTRTVENMDAEYTSVADILDRDDDIKPILEESLRFAEKMNLFSDIEE
SEIDEEEAPMMSEEETPKRKLSMLCLLNGIVVKDVGADVVPLALSEQQRI
AKLLADDHSVELISKAERSFDRWVSVDPNLIVVQRIGRGLKTNERRTRVT
TSDDALPPMTAGSLFTIREALSTIKYISASTATDESTTTVWLAGSDHTHP
QFIRAKRVMQELAASGVMNKLKARVAVLDEASVVNHEVLGCSVASSCLDI
PIVVIDGKRMPASLFPEVEDLVIQLASNYDDADRSNMRDNDTRFLHRLHV
NEVKAACEESSRESEEKVPFSTITAAIEKNSHEAFSYYQRPRGNEQGTTP
LSVTAVVDPLSREAYIIASFLDELQSVYDSETLSTTVVLAPDSRALRKPL
DIPDVYRKFVLQGRSTFHKESGGRLTPRASFFSLPQKSVLTVAVEPPRAW
FVSSYATNYDMDNVILTTLPENVTELHAEYELKNLIVEGSCLDENEDPPQ
GLKLYLENDNGVSVDTLVMANLGYFQLKVPTPGRWNLRLAPGRSSKIFSL
VRMEMYKDFTKTTYNAGSDGRVPIPVESFDGAGGILLRVKRNEGMEGISL
LNTEGDDSKYESSAKASILGRLKSSLSSIYSSSARSLSKVSPGKAGGDSK
YETIHVFSVASGHLYERFLKIMISSVTKHASRPVKFWLLENYLSPSFKKV
LPLFAKRHGAEVGMVTYGWPGWLRAQTEKQRIIWAYKILFLDVLFPLDVG
RIIFVDSDQVVRGDLAELMDIDLKGAPYGYVPFCDSRKEVEGYRFWKTGF
WKDTLQGAKYRISALYVVDLNTFRETAAGDNLRSIYQGLSADPNSLSNLD
QDLPNYASAVSSFGGVVPIFDLPQEWLWCESWCDDESKARAKAIDLCNNP
MTKEPKLSSAKRIISEWVDYDNAASDLTEELYKYLQSETNIYTIPENKTC
EACEAPAPERQHEEPDKADKAGLSFADVKIKEEL*
back to top

spliced messenger RNA

>Gcaud8007.t1 ID=Gcaud8007.t1|Name=Gcaud8007.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=4755bp|location=Sequence derived from alignment at NODE_831_length_17362_cov_4.155231:5555..10309+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCGCGTCGCGTTGCGTCGCGCTGCGCGTCGCTCTGTTTGTGGCCAC
ACTACTCGTCTCCGCCGCAGTCGCCGATCGCTCGCTGCACGTCGGTCTTC
ACGCGTCGTGGCGCGCCACCCGTGTCTCTTCCGAGGCGCTGTCATGGCTC
GTTCGGACCTTTTCGCCCAATGTGGTGTCTTCTTTCACCACGCGCTTCTG
CAGCGCTGCGTCCGACGTGTGGACGTTTACGGATCGCGAATTGACGGAAC
GCTGGGACCACTTTTGCACCATGTCTGCCGTCAGCCCGCTGCTCCAGGAG
GGTAACGTCGAGGGGCATACGTTGGAATGGCTGTTGAATGCGAGGGTGTT
CTCGCCGTTTGTATCCATGCACTACGCAGTGGCTGAGAGTGTGCTGTCTC
GATTCGGGCAGTCGTTGCGCGATGCACCCGCTGTATTTGTCGTTGATGCC
GATGCGTCGCGACGCAACGCCGTGCTCATCACCGACCCGCAACGCTTATC
CGATTGCGACGATTGTCCTACCATAACTTCACAAGAACCGCTATCATTTC
TGCAACCCATCACACCGGAGATCGTTCTCTCGCCCCATGCGCGAGCGCCT
CGTATGCGATTCGTATTTGCAGACACAGCTTCGTCGCAGTTTTGCGAGTG
GTTTACAACTTTGCAACCACTAATTCAACAACCTTCCCACCGAACCATTC
TTCGCTTCTGGTCGCCGTCTACCGTCGCGTACAAGCCGGGTTTACAGGCG
TTCACCGTGCATGCCACACTCAAGAGCACCGAGTACAAAGTCGTCGACGA
TCGTGTGTTCGAGACCAAGCTCTTCCCCGACTGCGGATACGCAGATGCGC
CGTGCGGTTCAGCTTCTCATCTCAATCATTCCGTCGCGTGGACTAACACA
GAACAGCCTCCATCCTACACCAGTTTGCAAGCGTTGCAATACATAGCACA
TGATACAAGCGGCAACACCGCAGCCATGCTTACGAAGCTGCGTGTATTCG
CGGAGGATACGCCTTCTGTTGTGCGTTCTCAAGAGTATCGTGATGGCGCT
TTTGTTAACCCAAAGGTAGAAATGCAACTCTACCGCAAGGTGACTCGATT
GAGGGCAGCGATTGGTGATCGACAATATCTCTTCATCAACGGCCGTTCAT
TTCCGCCTCGCTCTCTTCTTCACGGATCTGATAAACTCTTTCGCTGCCTC
TCTTCCATCGCCACTGCTTCGGCGAACGCACCGCAGCTTTTCAAGCATGG
CACTGAACGTGCGACCATGTTTGGTGACTTTCATGCTATGCAGCGCAATC
CTGACGCTAGTCTGCGTGTAGACTTGCGTCTCGAAGAGTTAACGCCGTCT
GCCTTAGTGCATCTGAACGATATGCAGACAGACTCAAGGTACAAGAAATG
GAAAACCTTGGATCTCACTTCTATGGATGACGTCAAAGATTTCGTCCATG
ATGCTGAAATGCGGCAGGTTATGACTTCGACATCGCTGCGTCAGCGACAC
ACTGACCTGATCAAGGTAAAAGCGGACCACCTATCGCTCTTCCTTCTTGT
GGATCCTGGAGATACGCAACAGTTTGGGTTCATGTCTATTCCGCGCTCCG
TGATTCACGCAGACCTCCCAATTCACGTTTCAATGCTTCTCGTTCCGAAT
GGCAGAACTTCATCTCTGGTGGCTGCAGGTTTCCACTACTTGCTGAGATT
GAAGGGACGTAAGACTGCCGTCAAGTTCCTGACAATGATCATGGAGATAT
TAGAGTACATTGGAGCGTTTCAGCCGGTCACTCTGTCTTCGGAAATAGTT
GAAATGTCATACACTAGAACTGTTGAAAACATGGATGCCGAGTACACTTC
TGTTGCTGACATTCTTGATCGCGACGACGACATAAAGCCGATTCTCGAAG
AGTCCCTGCGTTTTGCAGAAAAGATGAATCTATTCTCTGATATCGAGGAA
AGCGAAATCGATGAGGAGGAAGCGCCGATGATGAGCGAGGAGGAAACACC
GAAACGGAAGCTTTCGATGCTATGTTTACTGAATGGCATTGTTGTCAAAG
ATGTAGGGGCGGATGTAGTTCCTCTAGCTCTTTCGGAGCAACAGCGTATC
GCCAAACTCCTCGCAGATGACCACTCTGTTGAGCTCATTTCAAAGGCGGA
GCGCTCATTTGACCGCTGGGTATCTGTAGATCCTAATCTCATCGTTGTTC
AGCGCATTGGAAGAGGCTTGAAGACAAACGAACGGCGAACACGAGTCACT
ACAAGCGATGATGCTCTTCCCCCAATGACTGCAGGTAGCCTTTTTACCAT
TCGCGAGGCACTATCTACTATCAAGTATATCTCAGCATCAACTGCAACAG
ATGAATCCACGACCACAGTTTGGCTTGCCGGAAGTGATCATACACATCCC
CAGTTCATAAGAGCGAAGCGGGTTATGCAAGAACTAGCCGCGTCAGGTGT
CATGAATAAGCTCAAAGCTCGAGTTGCCGTTCTAGACGAAGCTTCTGTCG
TAAACCATGAAGTTCTGGGGTGCTCAGTAGCTTCTTCCTGCCTTGATATC
CCTATTGTTGTCATCGACGGAAAACGGATGCCTGCCTCGTTGTTTCCGGA
AGTGGAAGATTTGGTGATACAGTTGGCTTCGAATTATGACGATGCGGACA
GATCGAATATGCGAGACAATGACACGAGATTTCTCCACCGCCTGCACGTC
AATGAAGTCAAAGCAGCGTGCGAGGAGTCCAGCAGAGAGAGTGAGGAGAA
GGTTCCGTTTTCAACCATTACGGCGGCCATCGAGAAAAACTCACATGAAG
CTTTCTCGTATTATCAGCGTCCCCGAGGCAACGAGCAGGGGACCACTCCC
TTGTCTGTTACTGCAGTTGTTGACCCTTTGAGTCGAGAGGCGTACATTAT
TGCATCGTTCTTAGACGAGCTTCAGAGCGTGTATGACTCTGAAACCTTAA
GCACGACTGTGGTACTTGCTCCAGACAGCAGAGCTTTGAGAAAACCACTC
GACATTCCAGATGTTTATCGAAAGTTTGTATTGCAAGGTCGGTCAACATT
TCACAAAGAGTCTGGGGGACGTTTAACACCCCGAGCTTCGTTCTTCAGCC
TTCCTCAGAAGAGTGTGCTGACTGTTGCTGTTGAGCCACCCAGGGCTTGG
TTCGTTTCTTCCTACGCCACAAACTATGACATGGACAATGTTATCTTAAC
AACGCTACCAGAGAACGTCACGGAATTACACGCCGAATATGAGCTCAAGA
ATCTCATCGTCGAAGGCTCTTGCTTAGATGAGAATGAGGACCCTCCACAG
GGTCTCAAGCTGTATCTCGAGAACGATAACGGCGTATCAGTAGATACCCT
CGTAATGGCCAACCTGGGATACTTTCAATTGAAGGTCCCCACACCTGGGC
GATGGAACCTCCGGCTAGCTCCTGGACGAAGCAGCAAAATCTTCTCCCTT
GTTCGCATGGAAATGTACAAAGATTTCACGAAAACCACGTACAATGCCGG
CTCTGATGGCCGAGTTCCAATCCCCGTTGAATCGTTTGATGGTGCAGGCG
GCATCTTGCTACGGGTTAAGAGAAATGAGGGCATGGAGGGAATTTCTTTA
TTGAACACTGAGGGTGACGACTCTAAATATGAATCCAGTGCTAAGGCAAG
CATTCTCGGGCGCCTGAAGTCCTCCTTATCGAGCATCTACAGCAGTAGCG
CGAGATCTTTGTCAAAGGTCAGTCCTGGAAAAGCGGGAGGTGATAGCAAG
TATGAAACCATTCATGTCTTCTCCGTAGCGTCAGGACATTTGTACGAACG
TTTCCTGAAGATTATGATCAGTAGTGTTACAAAGCATGCGAGTCGTCCTG
TGAAGTTCTGGTTGCTAGAGAACTACTTGTCGCCATCGTTCAAGAAAGTT
CTGCCTCTTTTTGCGAAGAGGCACGGTGCTGAAGTAGGCATGGTTACGTA
TGGATGGCCTGGATGGTTGCGTGCTCAAACAGAGAAGCAGCGAATCATAT
GGGCTTACAAGATCTTGTTTCTTGATGTGTTGTTTCCTTTGGACGTTGGG
AGGATCATATTTGTAGACTCTGACCAAGTTGTTCGGGGAGATTTGGCCGA
ACTCATGGATATTGATCTGAAGGGAGCACCGTATGGGTATGTTCCCTTCT
GCGACTCTCGTAAGGAGGTAGAAGGCTATCGATTTTGGAAGACCGGGTTT
TGGAAAGACACTTTGCAGGGGGCCAAGTATCGTATTTCAGCGCTTTACGT
GGTAGACCTCAACACATTCCGCGAAACGGCAGCGGGAGACAATCTGCGCT
CCATTTATCAAGGGTTGAGCGCCGATCCGAACTCATTGTCGAATTTGGAT
CAGGACCTTCCCAATTATGCGTCAGCTGTGTCATCATTTGGAGGGGTTGT
GCCCATCTTCGATCTACCGCAAGAGTGGCTATGGTGTGAGAGTTGGTGCG
ATGATGAGAGCAAAGCAAGGGCCAAGGCGATTGATTTATGCAATAATCCA
ATGACCAAAGAACCAAAGCTGTCGAGCGCGAAGAGGATTATTAGTGAATG
GGTTGATTATGACAACGCTGCCAGTGATTTGACAGAGGAACTGTACAAGT
ATCTACAATCTGAAACCAATATTTACACAATACCAGAAAACAAAACATGC
GAAGCATGCGAGGCACCTGCACCTGAAAGGCAACATGAGGAACCTGACAA
AGCTGACAAAGCTGGTCTTTCCTTTGCTGATGTTAAAATAAAGGAGGAGC
TATAG
back to top

protein sequence of Gcaud8007.t1

>Gcaud8007.t1 ID=Gcaud8007.t1|Name=Gcaud8007.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1585bp
MAASRCVALRVALFVATLLVSAAVADRSLHVGLHASWRATRVSSEALSWL
VRTFSPNVVSSFTTRFCSAASDVWTFTDRELTERWDHFCTMSAVSPLLQE
GNVEGHTLEWLLNARVFSPFVSMHYAVAESVLSRFGQSLRDAPAVFVVDA
DASRRNAVLITDPQRLSDCDDCPTITSQEPLSFLQPITPEIVLSPHARAP
RMRFVFADTASSQFCEWFTTLQPLIQQPSHRTILRFWSPSTVAYKPGLQA
FTVHATLKSTEYKVVDDRVFETKLFPDCGYADAPCGSASHLNHSVAWTNT
EQPPSYTSLQALQYIAHDTSGNTAAMLTKLRVFAEDTPSVVRSQEYRDGA
FVNPKVEMQLYRKVTRLRAAIGDRQYLFINGRSFPPRSLLHGSDKLFRCL
SSIATASANAPQLFKHGTERATMFGDFHAMQRNPDASLRVDLRLEELTPS
ALVHLNDMQTDSRYKKWKTLDLTSMDDVKDFVHDAEMRQVMTSTSLRQRH
TDLIKVKADHLSLFLLVDPGDTQQFGFMSIPRSVIHADLPIHVSMLLVPN
GRTSSLVAAGFHYLLRLKGRKTAVKFLTMIMEILEYIGAFQPVTLSSEIV
EMSYTRTVENMDAEYTSVADILDRDDDIKPILEESLRFAEKMNLFSDIEE
SEIDEEEAPMMSEEETPKRKLSMLCLLNGIVVKDVGADVVPLALSEQQRI
AKLLADDHSVELISKAERSFDRWVSVDPNLIVVQRIGRGLKTNERRTRVT
TSDDALPPMTAGSLFTIREALSTIKYISASTATDESTTTVWLAGSDHTHP
QFIRAKRVMQELAASGVMNKLKARVAVLDEASVVNHEVLGCSVASSCLDI
PIVVIDGKRMPASLFPEVEDLVIQLASNYDDADRSNMRDNDTRFLHRLHV
NEVKAACEESSRESEEKVPFSTITAAIEKNSHEAFSYYQRPRGNEQGTTP
LSVTAVVDPLSREAYIIASFLDELQSVYDSETLSTTVVLAPDSRALRKPL
DIPDVYRKFVLQGRSTFHKESGGRLTPRASFFSLPQKSVLTVAVEPPRAW
FVSSYATNYDMDNVILTTLPENVTELHAEYELKNLIVEGSCLDENEDPPQ
GLKLYLENDNGVSVDTLVMANLGYFQLKVPTPGRWNLRLAPGRSSKIFSL
VRMEMYKDFTKTTYNAGSDGRVPIPVESFDGAGGILLRVKRNEGMEGISL
LNTEGDDSKYESSAKASILGRLKSSLSSIYSSSARSLSKVSPGKAGGDSK
YETIHVFSVASGHLYERFLKIMISSVTKHASRPVKFWLLENYLSPSFKKV
LPLFAKRHGAEVGMVTYGWPGWLRAQTEKQRIIWAYKILFLDVLFPLDVG
RIIFVDSDQVVRGDLAELMDIDLKGAPYGYVPFCDSRKEVEGYRFWKTGF
WKDTLQGAKYRISALYVVDLNTFRETAAGDNLRSIYQGLSADPNSLSNLD
QDLPNYASAVSSFGGVVPIFDLPQEWLWCESWCDDESKARAKAIDLCNNP
MTKEPKLSSAKRIISEWVDYDNAASDLTEELYKYLQSETNIYTIPENKTC
EACEAPAPERQHEEPDKADKAGLSFADVKIKEEL*
back to top

mRNA from alignment at NODE_831_length_17362_cov_4.155231:5555..10309+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gcaud8007.t1 ID=Gcaud8007.t1|Name=Gcaud8007.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=4755bp|location=Sequence derived from alignment at NODE_831_length_17362_cov_4.155231:5555..10309+ (Gracilaria caudata M_176_S67 male)
ATGGCCGCGTCGCGTTGCGTCGCGCTGCGCGTCGCTCTGTTTGTGGCCAC ACTACTCGTCTCCGCCGCAGTCGCCGATCGCTCGCTGCACGTCGGTCTTC ACGCGTCGTGGCGCGCCACCCGTGTCTCTTCCGAGGCGCTGTCATGGCTC GTTCGGACCTTTTCGCCCAATGTGGTGTCTTCTTTCACCACGCGCTTCTG CAGCGCTGCGTCCGACGTGTGGACGTTTACGGATCGCGAATTGACGGAAC GCTGGGACCACTTTTGCACCATGTCTGCCGTCAGCCCGCTGCTCCAGGAG GGTAACGTCGAGGGGCATACGTTGGAATGGCTGTTGAATGCGAGGGTGTT CTCGCCGTTTGTATCCATGCACTACGCAGTGGCTGAGAGTGTGCTGTCTC GATTCGGGCAGTCGTTGCGCGATGCACCCGCTGTATTTGTCGTTGATGCC GATGCGTCGCGACGCAACGCCGTGCTCATCACCGACCCGCAACGCTTATC CGATTGCGACGATTGTCCTACCATAACTTCACAAGAACCGCTATCATTTC TGCAACCCATCACACCGGAGATCGTTCTCTCGCCCCATGCGCGAGCGCCT CGTATGCGATTCGTATTTGCAGACACAGCTTCGTCGCAGTTTTGCGAGTG GTTTACAACTTTGCAACCACTAATTCAACAACCTTCCCACCGAACCATTC TTCGCTTCTGGTCGCCGTCTACCGTCGCGTACAAGCCGGGTTTACAGGCG TTCACCGTGCATGCCACACTCAAGAGCACCGAGTACAAAGTCGTCGACGA TCGTGTGTTCGAGACCAAGCTCTTCCCCGACTGCGGATACGCAGATGCGC CGTGCGGTTCAGCTTCTCATCTCAATCATTCCGTCGCGTGGACTAACACA GAACAGCCTCCATCCTACACCAGTTTGCAAGCGTTGCAATACATAGCACA TGATACAAGCGGCAACACCGCAGCCATGCTTACGAAGCTGCGTGTATTCG CGGAGGATACGCCTTCTGTTGTGCGTTCTCAAGAGTATCGTGATGGCGCT TTTGTTAACCCAAAGGTAGAAATGCAACTCTACCGCAAGGTGACTCGATT GAGGGCAGCGATTGGTGATCGACAATATCTCTTCATCAACGGCCGTTCAT TTCCGCCTCGCTCTCTTCTTCACGGATCTGATAAACTCTTTCGCTGCCTC TCTTCCATCGCCACTGCTTCGGCGAACGCACCGCAGCTTTTCAAGCATGG CACTGAACGTGCGACCATGTTTGGTGACTTTCATGCTATGCAGCGCAATC CTGACGCTAGTCTGCGTGTAGACTTGCGTCTCGAAGAGTTAACGCCGTCT GCCTTAGTGCATCTGAACGATATGCAGACAGACTCAAGGTACAAGAAATG GAAAACCTTGGATCTCACTTCTATGGATGACGTCAAAGATTTCGTCCATG ATGCTGAAATGCGGCAGGTTATGACTTCGACATCGCTGCGTCAGCGACAC ACTGACCTGATCAAGGTAAAAGCGGACCACCTATCGCTCTTCCTTCTTGT GGATCCTGGAGATACGCAACAGTTTGGGTTCATGTCTATTCCGCGCTCCG TGATTCACGCAGACCTCCCAATTCACGTTTCAATGCTTCTCGTTCCGAAT GGCAGAACTTCATCTCTGGTGGCTGCAGGTTTCCACTACTTGCTGAGATT GAAGGGACGTAAGACTGCCGTCAAGTTCCTGACAATGATCATGGAGATAT TAGAGTACATTGGAGCGTTTCAGCCGGTCACTCTGTCTTCGGAAATAGTT GAAATGTCATACACTAGAACTGTTGAAAACATGGATGCCGAGTACACTTC TGTTGCTGACATTCTTGATCGCGACGACGACATAAAGCCGATTCTCGAAG AGTCCCTGCGTTTTGCAGAAAAGATGAATCTATTCTCTGATATCGAGGAA AGCGAAATCGATGAGGAGGAAGCGCCGATGATGAGCGAGGAGGAAACACC GAAACGGAAGCTTTCGATGCTATGTTTACTGAATGGCATTGTTGTCAAAG ATGTAGGGGCGGATGTAGTTCCTCTAGCTCTTTCGGAGCAACAGCGTATC GCCAAACTCCTCGCAGATGACCACTCTGTTGAGCTCATTTCAAAGGCGGA GCGCTCATTTGACCGCTGGGTATCTGTAGATCCTAATCTCATCGTTGTTC AGCGCATTGGAAGAGGCTTGAAGACAAACGAACGGCGAACACGAGTCACT ACAAGCGATGATGCTCTTCCCCCAATGACTGCAGGTAGCCTTTTTACCAT TCGCGAGGCACTATCTACTATCAAGTATATCTCAGCATCAACTGCAACAG ATGAATCCACGACCACAGTTTGGCTTGCCGGAAGTGATCATACACATCCC CAGTTCATAAGAGCGAAGCGGGTTATGCAAGAACTAGCCGCGTCAGGTGT CATGAATAAGCTCAAAGCTCGAGTTGCCGTTCTAGACGAAGCTTCTGTCG TAAACCATGAAGTTCTGGGGTGCTCAGTAGCTTCTTCCTGCCTTGATATC CCTATTGTTGTCATCGACGGAAAACGGATGCCTGCCTCGTTGTTTCCGGA AGTGGAAGATTTGGTGATACAGTTGGCTTCGAATTATGACGATGCGGACA GATCGAATATGCGAGACAATGACACGAGATTTCTCCACCGCCTGCACGTC AATGAAGTCAAAGCAGCGTGCGAGGAGTCCAGCAGAGAGAGTGAGGAGAA GGTTCCGTTTTCAACCATTACGGCGGCCATCGAGAAAAACTCACATGAAG CTTTCTCGTATTATCAGCGTCCCCGAGGCAACGAGCAGGGGACCACTCCC TTGTCTGTTACTGCAGTTGTTGACCCTTTGAGTCGAGAGGCGTACATTAT TGCATCGTTCTTAGACGAGCTTCAGAGCGTGTATGACTCTGAAACCTTAA GCACGACTGTGGTACTTGCTCCAGACAGCAGAGCTTTGAGAAAACCACTC GACATTCCAGATGTTTATCGAAAGTTTGTATTGCAAGGTCGGTCAACATT TCACAAAGAGTCTGGGGGACGTTTAACACCCCGAGCTTCGTTCTTCAGCC TTCCTCAGAAGAGTGTGCTGACTGTTGCTGTTGAGCCACCCAGGGCTTGG TTCGTTTCTTCCTACGCCACAAACTATGACATGGACAATGTTATCTTAAC AACGCTACCAGAGAACGTCACGGAATTACACGCCGAATATGAGCTCAAGA ATCTCATCGTCGAAGGCTCTTGCTTAGATGAGAATGAGGACCCTCCACAG GGTCTCAAGCTGTATCTCGAGAACGATAACGGCGTATCAGTAGATACCCT CGTAATGGCCAACCTGGGATACTTTCAATTGAAGGTCCCCACACCTGGGC GATGGAACCTCCGGCTAGCTCCTGGACGAAGCAGCAAAATCTTCTCCCTT GTTCGCATGGAAATGTACAAAGATTTCACGAAAACCACGTACAATGCCGG CTCTGATGGCCGAGTTCCAATCCCCGTTGAATCGTTTGATGGTGCAGGCG GCATCTTGCTACGGGTTAAGAGAAATGAGGGCATGGAGGGAATTTCTTTA TTGAACACTGAGGGTGACGACTCTAAATATGAATCCAGTGCTAAGGCAAG CATTCTCGGGCGCCTGAAGTCCTCCTTATCGAGCATCTACAGCAGTAGCG CGAGATCTTTGTCAAAGGTCAGTCCTGGAAAAGCGGGAGGTGATAGCAAG TATGAAACCATTCATGTCTTCTCCGTAGCGTCAGGACATTTGTACGAACG TTTCCTGAAGATTATGATCAGTAGTGTTACAAAGCATGCGAGTCGTCCTG TGAAGTTCTGGTTGCTAGAGAACTACTTGTCGCCATCGTTCAAGAAAGTT CTGCCTCTTTTTGCGAAGAGGCACGGTGCTGAAGTAGGCATGGTTACGTA TGGATGGCCTGGATGGTTGCGTGCTCAAACAGAGAAGCAGCGAATCATAT GGGCTTACAAGATCTTGTTTCTTGATGTGTTGTTTCCTTTGGACGTTGGG AGGATCATATTTGTAGACTCTGACCAAGTTGTTCGGGGAGATTTGGCCGA ACTCATGGATATTGATCTGAAGGGAGCACCGTATGGGTATGTTCCCTTCT GCGACTCTCGTAAGGAGGTAGAAGGCTATCGATTTTGGAAGACCGGGTTT TGGAAAGACACTTTGCAGGGGGCCAAGTATCGTATTTCAGCGCTTTACGT GGTAGACCTCAACACATTCCGCGAAACGGCAGCGGGAGACAATCTGCGCT CCATTTATCAAGGGTTGAGCGCCGATCCGAACTCATTGTCGAATTTGGAT CAGGACCTTCCCAATTATGCGTCAGCTGTGTCATCATTTGGAGGGGTTGT GCCCATCTTCGATCTACCGCAAGAGTGGCTATGGTGTGAGAGTTGGTGCG ATGATGAGAGCAAAGCAAGGGCCAAGGCGATTGATTTATGCAATAATCCA ATGACCAAAGAACCAAAGCTGTCGAGCGCGAAGAGGATTATTAGTGAATG GGTTGATTATGACAACGCTGCCAGTGATTTGACAGAGGAACTGTACAAGT ATCTACAATCTGAAACCAATATTTACACAATACCAGAAAACAAAACATGC GAAGCATGCGAGGCACCTGCACCTGAAAGGCAACATGAGGAACCTGACAA AGCTGACAAAGCTGGTCTTTCCTTTGCTGATGTTAAAATAAAGGAGGAGC TATAG
back to top

Coding sequence (CDS) from alignment at NODE_831_length_17362_cov_4.155231:5555..10309+

>Gcaud8007.t1 ID=Gcaud8007.t1|Name=Gcaud8007.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=4755bp|location=Sequence derived from alignment at NODE_831_length_17362_cov_4.155231:5555..10309+ (Gracilaria caudata M_176_S67 male)
ATGGCCGCGTCGCGTTGCGTCGCGCTGCGCGTCGCTCTGTTTGTGGCCAC
ACTACTCGTCTCCGCCGCAGTCGCCGATCGCTCGCTGCACGTCGGTCTTC
ACGCGTCGTGGCGCGCCACCCGTGTCTCTTCCGAGGCGCTGTCATGGCTC
GTTCGGACCTTTTCGCCCAATGTGGTGTCTTCTTTCACCACGCGCTTCTG
CAGCGCTGCGTCCGACGTGTGGACGTTTACGGATCGCGAATTGACGGAAC
GCTGGGACCACTTTTGCACCATGTCTGCCGTCAGCCCGCTGCTCCAGGAG
GGTAACGTCGAGGGGCATACGTTGGAATGGCTGTTGAATGCGAGGGTGTT
CTCGCCGTTTGTATCCATGCACTACGCAGTGGCTGAGAGTGTGCTGTCTC
GATTCGGGCAGTCGTTGCGCGATGCACCCGCTGTATTTGTCGTTGATGCC
GATGCGTCGCGACGCAACGCCGTGCTCATCACCGACCCGCAACGCTTATC
CGATTGCGACGATTGTCCTACCATAACTTCACAAGAACCGCTATCATTTC
TGCAACCCATCACACCGGAGATCGTTCTCTCGCCCCATGCGCGAGCGCCT
CGTATGCGATTCGTATTTGCAGACACAGCTTCGTCGCAGTTTTGCGAGTG
GTTTACAACTTTGCAACCACTAATTCAACAACCTTCCCACCGAACCATTC
TTCGCTTCTGGTCGCCGTCTACCGTCGCGTACAAGCCGGGTTTACAGGCG
TTCACCGTGCATGCCACACTCAAGAGCACCGAGTACAAAGTCGTCGACGA
TCGTGTGTTCGAGACCAAGCTCTTCCCCGACTGCGGATACGCAGATGCGC
CGTGCGGTTCAGCTTCTCATCTCAATCATTCCGTCGCGTGGACTAACACA
GAACAGCCTCCATCCTACACCAGTTTGCAAGCGTTGCAATACATAGCACA
TGATACAAGCGGCAACACCGCAGCCATGCTTACGAAGCTGCGTGTATTCG
CGGAGGATACGCCTTCTGTTGTGCGTTCTCAAGAGTATCGTGATGGCGCT
TTTGTTAACCCAAAGGTAGAAATGCAACTCTACCGCAAGGTGACTCGATT
GAGGGCAGCGATTGGTGATCGACAATATCTCTTCATCAACGGCCGTTCAT
TTCCGCCTCGCTCTCTTCTTCACGGATCTGATAAACTCTTTCGCTGCCTC
TCTTCCATCGCCACTGCTTCGGCGAACGCACCGCAGCTTTTCAAGCATGG
CACTGAACGTGCGACCATGTTTGGTGACTTTCATGCTATGCAGCGCAATC
CTGACGCTAGTCTGCGTGTAGACTTGCGTCTCGAAGAGTTAACGCCGTCT
GCCTTAGTGCATCTGAACGATATGCAGACAGACTCAAGGTACAAGAAATG
GAAAACCTTGGATCTCACTTCTATGGATGACGTCAAAGATTTCGTCCATG
ATGCTGAAATGCGGCAGGTTATGACTTCGACATCGCTGCGTCAGCGACAC
ACTGACCTGATCAAGGTAAAAGCGGACCACCTATCGCTCTTCCTTCTTGT
GGATCCTGGAGATACGCAACAGTTTGGGTTCATGTCTATTCCGCGCTCCG
TGATTCACGCAGACCTCCCAATTCACGTTTCAATGCTTCTCGTTCCGAAT
GGCAGAACTTCATCTCTGGTGGCTGCAGGTTTCCACTACTTGCTGAGATT
GAAGGGACGTAAGACTGCCGTCAAGTTCCTGACAATGATCATGGAGATAT
TAGAGTACATTGGAGCGTTTCAGCCGGTCACTCTGTCTTCGGAAATAGTT
GAAATGTCATACACTAGAACTGTTGAAAACATGGATGCCGAGTACACTTC
TGTTGCTGACATTCTTGATCGCGACGACGACATAAAGCCGATTCTCGAAG
AGTCCCTGCGTTTTGCAGAAAAGATGAATCTATTCTCTGATATCGAGGAA
AGCGAAATCGATGAGGAGGAAGCGCCGATGATGAGCGAGGAGGAAACACC
GAAACGGAAGCTTTCGATGCTATGTTTACTGAATGGCATTGTTGTCAAAG
ATGTAGGGGCGGATGTAGTTCCTCTAGCTCTTTCGGAGCAACAGCGTATC
GCCAAACTCCTCGCAGATGACCACTCTGTTGAGCTCATTTCAAAGGCGGA
GCGCTCATTTGACCGCTGGGTATCTGTAGATCCTAATCTCATCGTTGTTC
AGCGCATTGGAAGAGGCTTGAAGACAAACGAACGGCGAACACGAGTCACT
ACAAGCGATGATGCTCTTCCCCCAATGACTGCAGGTAGCCTTTTTACCAT
TCGCGAGGCACTATCTACTATCAAGTATATCTCAGCATCAACTGCAACAG
ATGAATCCACGACCACAGTTTGGCTTGCCGGAAGTGATCATACACATCCC
CAGTTCATAAGAGCGAAGCGGGTTATGCAAGAACTAGCCGCGTCAGGTGT
CATGAATAAGCTCAAAGCTCGAGTTGCCGTTCTAGACGAAGCTTCTGTCG
TAAACCATGAAGTTCTGGGGTGCTCAGTAGCTTCTTCCTGCCTTGATATC
CCTATTGTTGTCATCGACGGAAAACGGATGCCTGCCTCGTTGTTTCCGGA
AGTGGAAGATTTGGTGATACAGTTGGCTTCGAATTATGACGATGCGGACA
GATCGAATATGCGAGACAATGACACGAGATTTCTCCACCGCCTGCACGTC
AATGAAGTCAAAGCAGCGTGCGAGGAGTCCAGCAGAGAGAGTGAGGAGAA
GGTTCCGTTTTCAACCATTACGGCGGCCATCGAGAAAAACTCACATGAAG
CTTTCTCGTATTATCAGCGTCCCCGAGGCAACGAGCAGGGGACCACTCCC
TTGTCTGTTACTGCAGTTGTTGACCCTTTGAGTCGAGAGGCGTACATTAT
TGCATCGTTCTTAGACGAGCTTCAGAGCGTGTATGACTCTGAAACCTTAA
GCACGACTGTGGTACTTGCTCCAGACAGCAGAGCTTTGAGAAAACCACTC
GACATTCCAGATGTTTATCGAAAGTTTGTATTGCAAGGTCGGTCAACATT
TCACAAAGAGTCTGGGGGACGTTTAACACCCCGAGCTTCGTTCTTCAGCC
TTCCTCAGAAGAGTGTGCTGACTGTTGCTGTTGAGCCACCCAGGGCTTGG
TTCGTTTCTTCCTACGCCACAAACTATGACATGGACAATGTTATCTTAAC
AACGCTACCAGAGAACGTCACGGAATTACACGCCGAATATGAGCTCAAGA
ATCTCATCGTCGAAGGCTCTTGCTTAGATGAGAATGAGGACCCTCCACAG
GGTCTCAAGCTGTATCTCGAGAACGATAACGGCGTATCAGTAGATACCCT
CGTAATGGCCAACCTGGGATACTTTCAATTGAAGGTCCCCACACCTGGGC
GATGGAACCTCCGGCTAGCTCCTGGACGAAGCAGCAAAATCTTCTCCCTT
GTTCGCATGGAAATGTACAAAGATTTCACGAAAACCACGTACAATGCCGG
CTCTGATGGCCGAGTTCCAATCCCCGTTGAATCGTTTGATGGTGCAGGCG
GCATCTTGCTACGGGTTAAGAGAAATGAGGGCATGGAGGGAATTTCTTTA
TTGAACACTGAGGGTGACGACTCTAAATATGAATCCAGTGCTAAGGCAAG
CATTCTCGGGCGCCTGAAGTCCTCCTTATCGAGCATCTACAGCAGTAGCG
CGAGATCTTTGTCAAAGGTCAGTCCTGGAAAAGCGGGAGGTGATAGCAAG
TATGAAACCATTCATGTCTTCTCCGTAGCGTCAGGACATTTGTACGAACG
TTTCCTGAAGATTATGATCAGTAGTGTTACAAAGCATGCGAGTCGTCCTG
TGAAGTTCTGGTTGCTAGAGAACTACTTGTCGCCATCGTTCAAGAAAGTT
CTGCCTCTTTTTGCGAAGAGGCACGGTGCTGAAGTAGGCATGGTTACGTA
TGGATGGCCTGGATGGTTGCGTGCTCAAACAGAGAAGCAGCGAATCATAT
GGGCTTACAAGATCTTGTTTCTTGATGTGTTGTTTCCTTTGGACGTTGGG
AGGATCATATTTGTAGACTCTGACCAAGTTGTTCGGGGAGATTTGGCCGA
ACTCATGGATATTGATCTGAAGGGAGCACCGTATGGGTATGTTCCCTTCT
GCGACTCTCGTAAGGAGGTAGAAGGCTATCGATTTTGGAAGACCGGGTTT
TGGAAAGACACTTTGCAGGGGGCCAAGTATCGTATTTCAGCGCTTTACGT
GGTAGACCTCAACACATTCCGCGAAACGGCAGCGGGAGACAATCTGCGCT
CCATTTATCAAGGGTTGAGCGCCGATCCGAACTCATTGTCGAATTTGGAT
CAGGACCTTCCCAATTATGCGTCAGCTGTGTCATCATTTGGAGGGGTTGT
GCCCATCTTCGATCTACCGCAAGAGTGGCTATGGTGTGAGAGTTGGTGCG
ATGATGAGAGCAAAGCAAGGGCCAAGGCGATTGATTTATGCAATAATCCA
ATGACCAAAGAACCAAAGCTGTCGAGCGCGAAGAGGATTATTAGTGAATG
GGTTGATTATGACAACGCTGCCAGTGATTTGACAGAGGAACTGTACAAGT
ATCTACAATCTGAAACCAATATTTACACAATACCAGAAAACAAAACATGC
GAAGCATGCGAGGCACCTGCACCTGAAAGGCAACATGAGGAACCTGACAA
AGCTGACAAAGCTGGTCTTTCCTTTGCTGATGTTAAAATAAAGGAGGAGC
TATAG
back to top