Gcaud8004.t1 (mRNA) Gracilaria caudata M_176_S67 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gcaud8004.t1
Unique Name	Gcaud8004.t1
Type	mRNA
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	1540

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_2384_length_5878_cov_5.957318	contig	NODE_2384_length_5878_cov_5.957318:772..5834 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	1121952.ATXT01000004_gene1127
PFAMs	TIG
Max annot lvl	201174\|Actinobacteria
Evalue	0.000992
EggNOG OGs	COG2373@1\|root,COG3468@1\|root,COG2373@2\|Bacteria,COG3468@2\|Bacteria,2HCJX@201174\|Actinobacteria,4FTDJ@85023\|Microbacteriaceae
Description	ig-like, plexins, transcription factors
COG category	MU

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud8004	Gcaud8004	Gracilaria caudata M_176_S67 male	gene	NODE_2384_length_5878_cov_5.957318 772..5834 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud8004.t1	Gcaud8004.t1	Gracilaria caudata M_176_S67 male	polypeptide	NODE_2384_length_5878_cov_5.957318 772..5834 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud8004.t1.CDS1	Gcaud8004.t1.CDS1	Gracilaria caudata M_176_S67 male	CDS	NODE_2384_length_5878_cov_5.957318 772..1141 -
Gcaud8004.t1.CDS2	Gcaud8004.t1.CDS2	Gracilaria caudata M_176_S67 male	CDS	NODE_2384_length_5878_cov_5.957318 1235..3841 -
Gcaud8004.t1.CDS3	Gcaud8004.t1.CDS3	Gracilaria caudata M_176_S67 male	CDS	NODE_2384_length_5878_cov_5.957318 4193..5834 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud8004.t1.exon1	Gcaud8004.t1.exon1	Gracilaria caudata M_176_S67 male	exon	NODE_2384_length_5878_cov_5.957318 772..1141 -
Gcaud8004.t1.exon2	Gcaud8004.t1.exon2	Gracilaria caudata M_176_S67 male	exon	NODE_2384_length_5878_cov_5.957318 1235..3841 -
Gcaud8004.t1.exon3	Gcaud8004.t1.exon3	Gracilaria caudata M_176_S67 male	exon	NODE_2384_length_5878_cov_5.957318 4193..5834 -

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud8004.t1.intron1	Gcaud8004.t1.intron1	Gracilaria caudata M_176_S67 male	intron	NODE_2384_length_5878_cov_5.957318 1142..1234 -
Gcaud8004.t1.intron2	Gcaud8004.t1.intron2	Gracilaria caudata M_176_S67 male	intron	NODE_2384_length_5878_cov_5.957318 3842..4192 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud8004.t1.start1	Gcaud8004.t1.start1	Gracilaria caudata M_176_S67 male	start_codon	NODE_2384_length_5878_cov_5.957318 5832..5834 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at NODE_2384_length_5878_cov_5.957318:772..5834-
coding sequence from alignment at NODE_2384_length_5878_cov_5.957318:772..5834-

mRNA sequence

>Gcaud8004.t1 ID=Gcaud8004.t1|Name=Gcaud8004.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1540bp
MFPSSSLSDGLLRVARRLIAVFILMSVVPVSHALSSTSQHYGSSLPSSTS
RFFHSSDLHSAALCEEPHRLRGAFLGRQIEQAPTFLASFEDNAELVSLIN
GTAETELFYIFVPQAGSTLSDYRFEAQIEDTSTFEEEDVSFFTVEDNSRG
FLAYNVTALIDFNKWSRKSAFEVRAVNVSSSEIVASSQSITIIVVGITFY
RTEDGNRTIYGGENFPFTLSTDEVLSNRDQNFEVFIQFYDGSSTNSSISV
PLTDIEIDLHGSMTIVTRDASCSPVTGVYDGSDVQLPAPCGMGFSANDLE
GEYVGPQFGVDFNEYANGSLITSFVWDEIVQGSDLEADGYSTFLNISIAG
EVPPVVQHITPLGPFRSTGGDTVVLTIANLPNDLDAALSWNYSLSINFTE
GFRNAIIDVGTIQVNENGTVSMLFTLPSGVGTDLPWAFTATKLSGEQLVG
VDQTDPSYLFSFIDTVTIDSITPVSGPEAGGTEVSLVGEFPNHDTSSVNV
FFDGVVINSSLITSISSSSITFITPPKASDANFEQIVTVEVGGTTSNEEG
GTVVTLSGQFISFDPSSSSVFVGASAIDEAQIVSYSDSELQFVTPPLADV
GLSYSQPVVVTIDSLTSNTVTFVYEESNAGVSITSSGGTFDSDSGQYRLG
LCSNGLFRAVVSSGWRVLNLTYSWTLTAPDGTSDLLSSSSITADSDALLV
PFTLFQTQNEPYSLQVAVQSESLSSQASLTLVQLNAQAISVHIIDPRERS
PSNPNVSLTIPSIIGLPGCPDPALEINSTAMTFVWEYRNQNYQFSYLNTT
APRDEISPTLLGREFHIPQSAMEYGSFSLSLLAYFTDQPEIRASDSTVVL
IRPVDLLAQINGGEVSQLVSSIQDFLMTASGSRDPDVLSGDDSEGLRYRW
SCRFSWNSAMDFAEQCDANLMPEDGVTQREFTVTSSALQAVQNSSGPMYI
EYSLQVSKTSQNATRAPLERDSEIVTSTLILPEDTPQLYESLSDIAVINN
LSTTVDLTNVKYYEDVVITPVSETNETTWSFQALLPASQAQTLLETDENL
LTFAGYYTAGAEPGRHSLGIKANVLSPNTEYTFLISTFRVGFAVNEQIIS
LRTVEQPTVTFGKLLTSSSTSYDTFTLSAYANYNGDFKFFLITDEFGFET
CVGGCQGTEFVSFQVGTAGNFSVRCDVYDSLGFTLLASASGGNILVTSSD
NNGADLSSFAADAEDAFVAGDHSDYHQVGTDMVKFVLSAGGSSSSTDSEA
LASFTAGLNQIAGNSVPNAIQSAGYVRTAAALASLTPELGITYNTETLYF
LVNITINAVQRTPDTAALQQLQDLLDFYDLTPELILASYSEGSSRRRLRQ
GMEVSEEEIIGIWLDMYEVMKEQIVLTALKKCPCGCVEEVRTGISAKGRG
ALTSRLQSVRQENANLRLALDIGMQQELQFSWCKGLYENSIKRLYFAVVK
SPDYVYLSRLRRDVTLTDGLFGMVVGVIRNNTLQDATLDIKDCYGLQVPI
AREVAEVEEDTPEDQVPKGLLLQPRKRWDENVSLTLYAPV

spliced messenger RNA

>Gcaud8004.t1 ID=Gcaud8004.t1|Name=Gcaud8004.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=4619bp|location=Sequence derived from alignment at NODE_2384_length_5878_cov_5.957318:772..5834- (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTTCCATCATCCTCTCTGAGTGATGGACTGCTTCGCGTTGCGAGACG
TTTAATTGCCGTCTTCATACTCATGAGCGTTGTGCCAGTCTCGCACGCTC
TCTCGTCTACATCCCAGCACTATGGATCTTCTCTCCCGTCTTCGACTTCA
CGATTCTTCCATTCATCTGATTTACATTCTGCCGCTTTATGTGAAGAGCC
ACACCGATTGCGTGGGGCATTTCTTGGAAGACAAATCGAACAAGCTCCGA
CGTTTCTCGCTTCGTTTGAAGACAACGCGGAACTTGTCTCCCTCATTAAC
GGCACTGCTGAAACCGAATTGTTCTATATTTTTGTCCCGCAAGCTGGGTC
TACGCTATCCGACTATCGGTTCGAGGCACAGATTGAGGACACATCTACTT
TCGAGGAGGAGGATGTGTCTTTCTTCACTGTGGAAGACAACTCGAGAGGG
TTTCTGGCGTACAACGTAACGGCGCTCATTGACTTCAACAAATGGAGTAG
AAAATCTGCTTTTGAAGTGCGCGCGGTAAACGTTTCTTCATCAGAAATTG
TAGCCTCCTCACAGTCCATAACTATAATTGTAGTTGGAATAACATTTTAT
AGGACAGAAGACGGGAATAGGACTATTTACGGCGGTGAAAACTTTCCGTT
TACGCTCTCGACAGACGAGGTTCTTTCCAATCGGGACCAGAATTTCGAGG
TTTTCATACAGTTTTACGATGGCAGCTCGACCAATTCCTCCATATCAGTT
CCGCTGACGGATATAGAAATAGATTTGCATGGATCGATGACTATTGTAAC
TCGCGATGCTTCGTGTTCTCCTGTGACCGGTGTCTATGATGGCTCTGACG
TGCAGCTCCCAGCACCATGTGGAATGGGCTTCTCCGCAAACGATCTCGAG
GGCGAATATGTTGGACCGCAATTTGGGGTCGATTTTAACGAGTATGCGAA
TGGGTCTTTAATTACCTCTTTCGTCTGGGACGAGATCGTGCAAGGTAGTG
ACCTTGAAGCAGATGGGTATTCGACGTTTCTGAATATCTCTATTGCTGGT
GAGGTTCCACCAGTTGTGCAACACATAACACCCCTGGGGCCCTTCAGAAG
CACTGGTGGAGATACTGTGGTGCTTACAATTGCCAATTTGCCAAATGACC
TGGATGCAGCGTTGAGTTGGAATTACTCCTTGTCTATCAATTTTACCGAA
GGCTTTCGGAATGCTATCATTGATGTGGGAACAATACAAGTGAACGAAAA
TGGGACGGTTTCTATGCTATTTACACTGCCTTCTGGTGTTGGAACAGATT
TACCATGGGCTTTCACGGCAACAAAACTCTCTGGTGAGCAACTTGTTGGG
GTTGACCAGACAGATCCTTCATACCTATTTTCGTTTATAGACACCGTCAC
GATCGACAGCATCACTCCTGTGTCCGGACCCGAAGCCGGAGGAACAGAAG
TTTCTTTGGTGGGAGAGTTCCCAAATCATGACACATCATCGGTGAACGTT
TTCTTTGATGGGGTGGTGATTAACTCTTCTCTAATCACCAGCATCAGTTC
CTCGAGCATAACTTTCATAACACCTCCGAAGGCCAGTGATGCCAACTTTG
AACAAATTGTCACAGTGGAAGTTGGTGGCACAACTTCCAATGAGGAAGGA
GGAACAGTGGTGACACTTTCCGGGCAATTTATCAGCTTTGATCCCTCCTC
GTCATCCGTATTCGTTGGGGCCAGTGCAATTGATGAAGCTCAAATCGTTT
CGTACAGTGACAGTGAATTGCAGTTTGTAACTCCTCCACTTGCAGATGTC
GGTCTGTCATATTCCCAACCGGTAGTGGTTACTATAGATTCCCTGACGTC
TAACACGGTAACTTTCGTCTATGAGGAGAGCAACGCCGGAGTCAGCATCA
CCAGCAGTGGCGGAACATTTGATTCTGACTCCGGACAATATCGCCTCGGC
TTGTGTAGCAATGGACTTTTCCGTGCAGTTGTTTCGTCGGGATGGAGAGT
CTTGAACCTAACGTATTCATGGACACTGACTGCACCGGACGGAACTAGTG
ATTTACTTTCTTCTTCCTCGATTACTGCGGACTCCGACGCTTTGCTAGTT
CCATTCACTCTGTTTCAAACCCAGAATGAACCATACTCACTGCAAGTTGC
AGTACAATCCGAATCCCTCTCATCTCAAGCAAGTCTCACCCTCGTACAGC
TTAATGCCCAGGCGATTAGTGTGCACATAATAGACCCGAGGGAAAGGTCT
CCATCAAATCCAAATGTCTCCTTAACCATTCCATCAATTATTGGCCTTCC
TGGATGTCCAGATCCTGCGCTTGAAATCAATTCAACCGCGATGACCTTCG
TTTGGGAATATCGGAACCAGAACTATCAGTTCTCTTATCTTAATACTACG
GCGCCAAGAGACGAAATCAGTCCTACTCTACTGGGCCGAGAATTTCACAT
CCCGCAGTCGGCAATGGAATATGGATCTTTCTCTCTTTCTCTACTTGCTT
ATTTTACGGATCAACCAGAGATAAGGGCATCAGATTCAACGGTCGTTTTG
ATTCGTCCTGTGGACCTCTTGGCACAGATCAATGGAGGAGAGGTGTCTCA
ACTGGTGTCATCAATTCAGGACTTCCTGATGACCGCTTCCGGGTCCAGGG
ATCCTGATGTGCTCTCGGGAGACGATTCCGAAGGGTTACGTTATCGATGG
TCATGCCGCTTCAGTTGGAATTCGGCCATGGACTTCGCAGAACAATGCGA
TGCGAATCTCATGCCTGAGGACGGGGTGACACAAAGAGAGTTCACTGTTA
CTTCTAGTGCGCTTCAAGCTGTGCAGAATAGCTCAGGTCCAATGTACATC
GAGTATTCTTTACAGGTGTCAAAGACTTCTCAGAATGCTACTAGGGCTCC
ACTTGAAAGAGACTCTGAGATTGTCACATCAACTTTGATCCTTCCAGAAG
ACACACCTCAACTCTATGAGTCGCTTTCTGATATCGCTGTTATTAACAAC
CTCTCTACCACAGTGGACTTAACCAACGTGAAGTATTACGAAGATGTTGT
TATCACACCCGTCTCAGAAACAAATGAGACCACATGGTCATTTCAAGCGC
TCTTGCCTGCATCCCAGGCACAAACTCTTCTGGAAACTGATGAAAACCTG
TTAACCTTCGCGGGATATTACACTGCAGGTGCTGAACCTGGTAGACATTC
ACTTGGCATTAAGGCAAACGTTCTTTCTCCTAATACCGAATACACATTCC
TCATCAGCACGTTTCGCGTGGGCTTTGCTGTGAACGAGCAGATTATTTCT
CTGAGGACAGTCGAGCAACCTACCGTTACGTTTGGAAAGCTTCTCACATC
CTCTAGTACTTCATACGATACTTTCACCTTGTCTGCGTATGCCAACTACA
ACGGGGATTTCAAATTCTTCTTGATAACTGACGAGTTTGGATTCGAAACT
TGTGTTGGTGGATGTCAGGGAACAGAGTTCGTGAGTTTCCAGGTGGGAAC
CGCTGGGAACTTCAGCGTGCGATGCGATGTGTATGACTCGCTCGGTTTCA
CTTTGCTTGCATCAGCGAGCGGAGGGAACATTTTGGTCACTAGCAGTGAT
AACAACGGAGCGGACCTTTCTTCGTTCGCTGCCGACGCTGAAGACGCTTT
TGTTGCCGGGGATCACTCAGATTACCATCAGGTAGGAACAGATATGGTGA
AGTTCGTGCTCTCCGCAGGAGGCAGCTCTTCAAGTACGGACTCTGAGGCG
CTTGCAAGCTTCACTGCGGGTTTGAATCAAATCGCCGGTAACTCGGTGCC
CAACGCAATCCAAAGCGCGGGATACGTGCGCACGGCAGCGGCTCTTGCCA
GTCTAACACCGGAGCTTGGCATCACATATAACACAGAGACTCTGTACTTC
TTGGTGAACATCACGATTAACGCTGTGCAACGAACGCCAGATACAGCTGC
GCTACAACAGCTGCAGGACCTTTTGGATTTCTACGACCTTACGCCAGAAC
TGATACTGGCGTCGTATTCGGAGGGCAGCTCGAGACGAAGGCTCCGACAG
GGCATGGAAGTGAGCGAAGAAGAAATCATTGGAATCTGGCTGGACATGTA
TGAAGTGATGAAGGAACAAATCGTACTTACGGCGTTGAAGAAATGCCCTT
GCGGCTGCGTGGAAGAGGTACGGACCGGAATCAGCGCAAAGGGGCGAGGC
GCACTAACTTCAAGACTGCAGAGTGTGCGACAGGAAAACGCCAACCTGAG
GTTAGCGTTGGACATTGGAATGCAGCAGGAATTGCAGTTCTCGTGGTGCA
AAGGGTTGTATGAGAATTCGATCAAGAGGTTGTACTTCGCCGTAGTGAAA
AGTCCAGATTACGTATACCTCTCACGACTACGGCGGGATGTGACTCTGAC
GGACGGGTTGTTCGGCATGGTGGTGGGTGTAATCCGCAACAACACGTTAC
AGGACGCGACGCTGGATATCAAGGACTGCTACGGGCTGCAGGTCCCGATT
GCGCGCGAAGTGGCGGAGGTGGAGGAAGACACTCCGGAGGATCAAGTGCC
GAAGGGGCTGTTGCTGCAGCCGCGCAAGAGGTGGGATGAGAACGTCTCTC
TCACTCTGTATGCGCCAGT

protein sequence of Gcaud8004.t1

>Gcaud8004.t1 ID=Gcaud8004.t1|Name=Gcaud8004.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1540bp
MFPSSSLSDGLLRVARRLIAVFILMSVVPVSHALSSTSQHYGSSLPSSTS
RFFHSSDLHSAALCEEPHRLRGAFLGRQIEQAPTFLASFEDNAELVSLIN
GTAETELFYIFVPQAGSTLSDYRFEAQIEDTSTFEEEDVSFFTVEDNSRG
FLAYNVTALIDFNKWSRKSAFEVRAVNVSSSEIVASSQSITIIVVGITFY
RTEDGNRTIYGGENFPFTLSTDEVLSNRDQNFEVFIQFYDGSSTNSSISV
PLTDIEIDLHGSMTIVTRDASCSPVTGVYDGSDVQLPAPCGMGFSANDLE
GEYVGPQFGVDFNEYANGSLITSFVWDEIVQGSDLEADGYSTFLNISIAG
EVPPVVQHITPLGPFRSTGGDTVVLTIANLPNDLDAALSWNYSLSINFTE
GFRNAIIDVGTIQVNENGTVSMLFTLPSGVGTDLPWAFTATKLSGEQLVG
VDQTDPSYLFSFIDTVTIDSITPVSGPEAGGTEVSLVGEFPNHDTSSVNV
FFDGVVINSSLITSISSSSITFITPPKASDANFEQIVTVEVGGTTSNEEG
GTVVTLSGQFISFDPSSSSVFVGASAIDEAQIVSYSDSELQFVTPPLADV
GLSYSQPVVVTIDSLTSNTVTFVYEESNAGVSITSSGGTFDSDSGQYRLG
LCSNGLFRAVVSSGWRVLNLTYSWTLTAPDGTSDLLSSSSITADSDALLV
PFTLFQTQNEPYSLQVAVQSESLSSQASLTLVQLNAQAISVHIIDPRERS
PSNPNVSLTIPSIIGLPGCPDPALEINSTAMTFVWEYRNQNYQFSYLNTT
APRDEISPTLLGREFHIPQSAMEYGSFSLSLLAYFTDQPEIRASDSTVVL
IRPVDLLAQINGGEVSQLVSSIQDFLMTASGSRDPDVLSGDDSEGLRYRW
SCRFSWNSAMDFAEQCDANLMPEDGVTQREFTVTSSALQAVQNSSGPMYI
EYSLQVSKTSQNATRAPLERDSEIVTSTLILPEDTPQLYESLSDIAVINN
LSTTVDLTNVKYYEDVVITPVSETNETTWSFQALLPASQAQTLLETDENL
LTFAGYYTAGAEPGRHSLGIKANVLSPNTEYTFLISTFRVGFAVNEQIIS
LRTVEQPTVTFGKLLTSSSTSYDTFTLSAYANYNGDFKFFLITDEFGFET
CVGGCQGTEFVSFQVGTAGNFSVRCDVYDSLGFTLLASASGGNILVTSSD
NNGADLSSFAADAEDAFVAGDHSDYHQVGTDMVKFVLSAGGSSSSTDSEA
LASFTAGLNQIAGNSVPNAIQSAGYVRTAAALASLTPELGITYNTETLYF
LVNITINAVQRTPDTAALQQLQDLLDFYDLTPELILASYSEGSSRRRLRQ
GMEVSEEEIIGIWLDMYEVMKEQIVLTALKKCPCGCVEEVRTGISAKGRG
ALTSRLQSVRQENANLRLALDIGMQQELQFSWCKGLYENSIKRLYFAVVK
SPDYVYLSRLRRDVTLTDGLFGMVVGVIRNNTLQDATLDIKDCYGLQVPI
AREVAEVEEDTPEDQVPKGLLLQPRKRWDENVSLTLYAPV

mRNA from alignment at NODE_2384_length_5878_cov_5.957318:772..5834-

Legend: polypeptideCDSexonstart_codonintron

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gcaud8004.t1 ID=Gcaud8004.t1|Name=Gcaud8004.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=5063bp|location=Sequence derived from alignment at NODE_2384_length_5878_cov_5.957318:772..5834- (Gracilaria caudata M_176_S67 male)
ATGTTTCCATCATCCTCTCTGAGTGATGGACTGCTTCGCGTTGCGAGACG
TTTAATTGCCGTCTTCATACTCATGAGCGTTGTGCCAGTCTCGCACGCTC
TCTCGTCTACATCCCAGCACTATGGATCTTCTCTCCCGTCTTCGACTTCA
CGATTCTTCCATTCATCTGATTTACATTCTGCCGCTTTATGTGAAGAGCC
ACACCGATTGCGTGGGGCATTTCTTGGAAGACAAATCGAACAAGCTCCGA
CGTTTCTCGCTTCGTTTGAAGACAACGCGGAACTTGTCTCCCTCATTAAC
GGCACTGCTGAAACCGAATTGTTCTATATTTTTGTCCCGCAAGCTGGGTC
TACGCTATCCGACTATCGGTTCGAGGCACAGATTGAGGACACATCTACTT
TCGAGGAGGAGGATGTGTCTTTCTTCACTGTGGAAGACAACTCGAGAGGG
TTTCTGGCGTACAACGTAACGGCGCTCATTGACTTCAACAAATGGAGTAG
AAAATCTGCTTTTGAAGTGCGCGCGGTAAACGTTTCTTCATCAGAAATTG
TAGCCTCCTCACAGTCCATAACTATAATTGTAGTTGGAATAACATTTTAT
AGGACAGAAGACGGGAATAGGACTATTTACGGCGGTGAAAACTTTCCGTT
TACGCTCTCGACAGACGAGGTTCTTTCCAATCGGGACCAGAATTTCGAGG
TTTTCATACAGTTTTACGATGGCAGCTCGACCAATTCCTCCATATCAGTT
CCGCTGACGGATATAGAAATAGATTTGCATGGATCGATGACTATTGTAAC
TCGCGATGCTTCGTGTTCTCCTGTGACCGGTGTCTATGATGGCTCTGACG
TGCAGCTCCCAGCACCATGTGGAATGGGCTTCTCCGCAAACGATCTCGAG
GGCGAATATGTTGGACCGCAATTTGGGGTCGATTTTAACGAGTATGCGAA
TGGGTCTTTAATTACCTCTTTCGTCTGGGACGAGATCGTGCAAGGTAGTG
ACCTTGAAGCAGATGGGTATTCGACGTTTCTGAATATCTCTATTGCTGGT
GAGGTTCCACCAGTTGTGCAACACATAACACCCCTGGGGCCCTTCAGAAG
CACTGGTGGAGATACTGTGGTGCTTACAATTGCCAATTTGCCAAATGACC
TGGATGCAGCGTTGAGTTGGAATTACTCCTTGTCTATCAATTTTACCGAA
GGCTTTCGGAATGCTATCATTGATGTGGGAACAATACAAGTGAACGAAAA
TGGGACGGTTTCTATGCTATTTACACTGCCTTCTGGTGTTGGAACAGATT
TACCATGGGCTTTCACGGCAACAAAACTCTCTGGTGAGCAACTTGTTGGG
GTTGACCAGACAGATCCTTCATACCTATTTTCGTTTATAGACACCGTCAC
GATCGACAGCATCACTCCTGTGTCCGGACCCGAAGCCGGAGGAACAGAAG
TTTCTTTGGTGGGAGAGTTCCCAAATCATGACACATCATCGGTGAACGTT
TTCTTTGATGGGGTGGTGATTAACTCTTCTCTAATCACCAGCATCAGTTC
CTCGAGCATAACTTTCATAACACCTCCGAAGGCCAGTGATGCCAACTTTG
AACAAATTGTCACAGTGGAAGTTGGTGGCACAACTTCCAATGGTGTGACG
TTCACGTACGAACCAATTGTAAAGCTGGACTCATTGACACCTTCCCGAGG
ACCAGTGGTAGGAGGCACGCTGGTGACATTGTTGGGCCAGTTCGTTGACT
TCGACGCATCTGTGCAGAATTCGGGAATATATTTTGGTTCAACAAAGATT
GACTCGTCTTTGATTCACACTGCGAATGCCACCGCCATCACTTTCAGCAC
ACCATCCCAAGGAACTGTAGGTGAGGCATCTGTTTACATATACGACGTCA
CGGTTCACGTTGAGGGCACTGCATCAAATCCGCTCCAGTTTTCCTATGAT
GCCCCGGTGTTGATTAGCTCGATCACTCCTAACACTGGCCCAGAGGAAGG
AGGAACAGTGGTGACACTTTCCGGGCAATTTATCAGCTTTGATCCCTCCT
CGTCATCCGTATTCGTTGGGGCCAGTGCAATTGATGAAGCTCAAATCGTT
TCGTACAGTGACAGTGAATTGCAGTTTGTAACTCCTCCACTTGCAGATGT
CGGTCTGTCATATTCCCAACCGGTAGTGGTTACTATAGATTCCCTGACGT
CTAACACGGTAACTTTCGTCTATGAGGAGAGCAACGCCGGAGTCAGCATC
ACCAGCAGTGGCGGAACATTTGATTCTGACTCCGGACAATATCGCCTCGG
CTTGTGTAGCAATGGACTTTTCCGTGCAGTTGTTTCGTCGGGATGGAGAG
TCTTGAACCTAACGTATTCATGGACACTGACTGCACCGGACGGAACTAGT
GATTTACTTTCTTCTTCCTCGATTACTGCGGACTCCGACGCTTTGCTAGT
TCCATTCACTCTGTTTCAAACCCAGAATGAACCATACTCACTGCAAGTTG
CAGTACAATCCGAATCCCTCTCATCTCAAGCAAGTCTCACCCTCGTACAG
CTTAATGCCCAGGCGATTAGTGTGCACATAATAGACCCGAGGGAAAGGTC
TCCATCAAATCCAAATGTCTCCTTAACCATTCCATCAATTATTGGCCTTC
CTGGATGTCCAGATCCTGCGCTTGAAATCAATTCAACCGCGATGACCTTC
GTTTGGGAATATCGGAACCAGAACTATCAGTTCTCTTATCTTAATACTAC
GGCGCCAAGAGACGAAATCAGTCCTACTCTACTGGGCCGAGAATTTCACA
TCCCGCAGTCGGCAATGGAATATGGATCTTTCTCTCTTTCTCTACTTGCT
TATTTTACGGATCAACCAGAGATAAGGGCATCAGATTCAACGGTCGTTTT
GATTCGTCCTGTGGACCTCTTGGCACAGATCAATGGAGGAGAGGTGTCTC
AACTGGTGTCATCAATTCAGGACTTCCTGATGACCGCTTCCGGGTCCAGG
GATCCTGATGTGCTCTCGGGAGACGATTCCGAAGGGTTACGTTATCGATG
GTCATGCCGCTTCAGTTGGAATTCGGCCATGGACTTCGCAGAACAATGCG
ATGCGAATCTCATGCCTGAGGACGGGGTGACACAAAGAGAGTTCACTGTT
ACTTCTAGTGCGCTTCAAGCTGTGCAGAATAGCTCAGGTCCAATGTACAT
CGAGTATTCTTTACAGGTGTCAAAGACTTCTCAGAATGCTACTAGGGCTC
CACTTGAAAGAGACTCTGAGATTGTCACATCAACTTTGATCCTTCCAGAA
GACACACCTCAACTCTATGAGTCGCTTTCTGATATCGCTGTTATTAACAA
CCTCTCTACCACAGTGGACTTAACCAACGTGAAGTATTACGAAGATGTTG
TTATCACACCCGTCTCAGAAACAAATGAGACCACATGGTCATTTCAAGCG
CTCTTGCCTGCATCCCAGGCACAAACTCTTCTGGAAACTGATGAAAACCT
GTTAACCTTCGCGGGATATTACACTGCAGGTGCTGAACCTGGTAGACATT
CACTTGGCATTAAGGCAAACGTTCTTTCTCCTAATACCGAATACACATTC
CTCATCAGCACGTTTCGCGTGGGCTTTGCTGTGAACGAGCAGATTATTTC
TCTGAGGACAGTCGAGCAACCTACCGTTACGTTTGGAAAGCTTCTCACAT
CCTCTAGTACTTCATACGATACTTTCACCTTGTCTGCGTATGCCAACTAC
AACGGGGATTTCAAATTCTTCTTGATAACTGACGAGTTTGGATTCGAAAC
TTGTGTTGGTGGATGTCAGGGAACAGAGTTCGTGAGTTTCCAGGTGGGAA
CCGCTGGGAACTTCAGCGTGCGATGCGATGTGTATGACTCGCTCGGTTTC
ACTTTGCTTGCATCAGCGAGCGGAGGGAACATTTTGGTCACTAGCAGTGA
TAACAACGGAGCGGACCTTTCTTCGTTCGCTGCCGACGCTGAAGACGCTT
TTGTTGCCGGGGATCACTCAGATTACCATCAGGTAGGAACAGATATGGTG
AAGTTCGTGCTCTCCGCAGGAGGCAGCTCTTCAAGTACGGACTCTGAGGC
GCTTGCAAGCTTCACTGCGGGTTTGAATCAAATCGCCGGTAACTCGGTGC
CCAACGCAATCCAAAGCGCGGGATACGTGCGCACGGCAGCGGCTCTTGCC
AGTCTAACACCGGAGCTTGGCATCACATATAACACAGAGACTCTGTACTT
CTTGGTGAACATCACGATTAACGCTGTGCAACGAACGCCAGATACAGCTG
CGCTACAACAGCTGCAGGACCTTTTGGATTTCTACGACCTTACGCCAGAA
CTGATACTGGCGTCGTATTCGGAGGGCAGCTCGAGACGAAGGCTCCGACA
GGGCATGGAAGTGAGCGAAGAAGAAATCATTGGAATCTGGCTGGACATGT
ATGAAGTGATGAAGGAACAAATCGTACTTACGGCGTTGAAGAAATGCCCT
TGCGGCTGCGTGGAAGAGGTACGGACCGGAATCAGCGCAAAGGGGCGAGG
CGCACTAACTTCAAGACTGCAGAGTGTGCGACAGGAAAACGCCAACCTGA
GTGCGGCGGCGGCGTAAGTGAATCCAACACAAGGCCAGCTGAGTGAAGTG
CGGATGAAGGTGGCGCACTTCTGCAACTCAGAGCAGGGCTTAGGGTTAGC
GTTGGACATTGGAATGCAGCAGGAATTGCAGTTCTCGTGGTGCAAAGGGT
TGTATGAGAATTCGATCAAGAGGTTGTACTTCGCCGTAGTGAAAAGTCCA
GATTACGTATACCTCTCACGACTACGGCGGGATGTGACTCTGACGGACGG
GTTGTTCGGCATGGTGGTGGGTGTAATCCGCAACAACACGTTACAGGACG
CGACGCTGGATATCAAGGACTGCTACGGGCTGCAGGTCCCGATTGCGCGC
GAAGTGGCGGAGGTGGAGGAAGACACTCCGGAGGATCAAGTGCCGAAGGG
GCTGTTGCTGCAGCCGCGCAAGAGGTGGGATGAGAACGTCTCTCTCACTC
TGTATGCGCCAGT

Coding sequence (CDS) from alignment at NODE_2384_length_5878_cov_5.957318:772..5834-

>Gcaud8004.t1 ID=Gcaud8004.t1|Name=Gcaud8004.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=4619bp|location=Sequence derived from alignment at NODE_2384_length_5878_cov_5.957318:772..5834- (Gracilaria caudata M_176_S67 male)
ATGTTTCCATCATCCTCTCTGAGTGATGGACTGCTTCGCGTTGCGAGACG
TTTAATTGCCGTCTTCATACTCATGAGCGTTGTGCCAGTCTCGCACGCTC
TCTCGTCTACATCCCAGCACTATGGATCTTCTCTCCCGTCTTCGACTTCA
CGATTCTTCCATTCATCTGATTTACATTCTGCCGCTTTATGTGAAGAGCC
ACACCGATTGCGTGGGGCATTTCTTGGAAGACAAATCGAACAAGCTCCGA
CGTTTCTCGCTTCGTTTGAAGACAACGCGGAACTTGTCTCCCTCATTAAC
GGCACTGCTGAAACCGAATTGTTCTATATTTTTGTCCCGCAAGCTGGGTC
TACGCTATCCGACTATCGGTTCGAGGCACAGATTGAGGACACATCTACTT
TCGAGGAGGAGGATGTGTCTTTCTTCACTGTGGAAGACAACTCGAGAGGG
TTTCTGGCGTACAACGTAACGGCGCTCATTGACTTCAACAAATGGAGTAG
AAAATCTGCTTTTGAAGTGCGCGCGGTAAACGTTTCTTCATCAGAAATTG
TAGCCTCCTCACAGTCCATAACTATAATTGTAGTTGGAATAACATTTTAT
AGGACAGAAGACGGGAATAGGACTATTTACGGCGGTGAAAACTTTCCGTT
TACGCTCTCGACAGACGAGGTTCTTTCCAATCGGGACCAGAATTTCGAGG
TTTTCATACAGTTTTACGATGGCAGCTCGACCAATTCCTCCATATCAGTT
CCGCTGACGGATATAGAAATAGATTTGCATGGATCGATGACTATTGTAAC
TCGCGATGCTTCGTGTTCTCCTGTGACCGGTGTCTATGATGGCTCTGACG
TGCAGCTCCCAGCACCATGTGGAATGGGCTTCTCCGCAAACGATCTCGAG
GGCGAATATGTTGGACCGCAATTTGGGGTCGATTTTAACGAGTATGCGAA
TGGGTCTTTAATTACCTCTTTCGTCTGGGACGAGATCGTGCAAGGTAGTG
ACCTTGAAGCAGATGGGTATTCGACGTTTCTGAATATCTCTATTGCTGGT
GAGGTTCCACCAGTTGTGCAACACATAACACCCCTGGGGCCCTTCAGAAG
CACTGGTGGAGATACTGTGGTGCTTACAATTGCCAATTTGCCAAATGACC
TGGATGCAGCGTTGAGTTGGAATTACTCCTTGTCTATCAATTTTACCGAA
GGCTTTCGGAATGCTATCATTGATGTGGGAACAATACAAGTGAACGAAAA
TGGGACGGTTTCTATGCTATTTACACTGCCTTCTGGTGTTGGAACAGATT
TACCATGGGCTTTCACGGCAACAAAACTCTCTGGTGAGCAACTTGTTGGG
GTTGACCAGACAGATCCTTCATACCTATTTTCGTTTATAGACACCGTCAC
GATCGACAGCATCACTCCTGTGTCCGGACCCGAAGCCGGAGGAACAGAAG
TTTCTTTGGTGGGAGAGTTCCCAAATCATGACACATCATCGGTGAACGTT
TTCTTTGATGGGGTGGTGATTAACTCTTCTCTAATCACCAGCATCAGTTC
CTCGAGCATAACTTTCATAACACCTCCGAAGGCCAGTGATGCCAACTTTG
AACAAATTGTCACAGTGGAAGTTGGTGGCACAACTTCCAATGAGGAAGGA
GGAACAGTGGTGACACTTTCCGGGCAATTTATCAGCTTTGATCCCTCCTC
GTCATCCGTATTCGTTGGGGCCAGTGCAATTGATGAAGCTCAAATCGTTT
CGTACAGTGACAGTGAATTGCAGTTTGTAACTCCTCCACTTGCAGATGTC
GGTCTGTCATATTCCCAACCGGTAGTGGTTACTATAGATTCCCTGACGTC
TAACACGGTAACTTTCGTCTATGAGGAGAGCAACGCCGGAGTCAGCATCA
CCAGCAGTGGCGGAACATTTGATTCTGACTCCGGACAATATCGCCTCGGC
TTGTGTAGCAATGGACTTTTCCGTGCAGTTGTTTCGTCGGGATGGAGAGT
CTTGAACCTAACGTATTCATGGACACTGACTGCACCGGACGGAACTAGTG
ATTTACTTTCTTCTTCCTCGATTACTGCGGACTCCGACGCTTTGCTAGTT
CCATTCACTCTGTTTCAAACCCAGAATGAACCATACTCACTGCAAGTTGC
AGTACAATCCGAATCCCTCTCATCTCAAGCAAGTCTCACCCTCGTACAGC
TTAATGCCCAGGCGATTAGTGTGCACATAATAGACCCGAGGGAAAGGTCT
CCATCAAATCCAAATGTCTCCTTAACCATTCCATCAATTATTGGCCTTCC
TGGATGTCCAGATCCTGCGCTTGAAATCAATTCAACCGCGATGACCTTCG
TTTGGGAATATCGGAACCAGAACTATCAGTTCTCTTATCTTAATACTACG
GCGCCAAGAGACGAAATCAGTCCTACTCTACTGGGCCGAGAATTTCACAT
CCCGCAGTCGGCAATGGAATATGGATCTTTCTCTCTTTCTCTACTTGCTT
ATTTTACGGATCAACCAGAGATAAGGGCATCAGATTCAACGGTCGTTTTG
ATTCGTCCTGTGGACCTCTTGGCACAGATCAATGGAGGAGAGGTGTCTCA
ACTGGTGTCATCAATTCAGGACTTCCTGATGACCGCTTCCGGGTCCAGGG
ATCCTGATGTGCTCTCGGGAGACGATTCCGAAGGGTTACGTTATCGATGG
TCATGCCGCTTCAGTTGGAATTCGGCCATGGACTTCGCAGAACAATGCGA
TGCGAATCTCATGCCTGAGGACGGGGTGACACAAAGAGAGTTCACTGTTA
CTTCTAGTGCGCTTCAAGCTGTGCAGAATAGCTCAGGTCCAATGTACATC
GAGTATTCTTTACAGGTGTCAAAGACTTCTCAGAATGCTACTAGGGCTCC
ACTTGAAAGAGACTCTGAGATTGTCACATCAACTTTGATCCTTCCAGAAG
ACACACCTCAACTCTATGAGTCGCTTTCTGATATCGCTGTTATTAACAAC
CTCTCTACCACAGTGGACTTAACCAACGTGAAGTATTACGAAGATGTTGT
TATCACACCCGTCTCAGAAACAAATGAGACCACATGGTCATTTCAAGCGC
TCTTGCCTGCATCCCAGGCACAAACTCTTCTGGAAACTGATGAAAACCTG
TTAACCTTCGCGGGATATTACACTGCAGGTGCTGAACCTGGTAGACATTC
ACTTGGCATTAAGGCAAACGTTCTTTCTCCTAATACCGAATACACATTCC
TCATCAGCACGTTTCGCGTGGGCTTTGCTGTGAACGAGCAGATTATTTCT
CTGAGGACAGTCGAGCAACCTACCGTTACGTTTGGAAAGCTTCTCACATC
CTCTAGTACTTCATACGATACTTTCACCTTGTCTGCGTATGCCAACTACA
ACGGGGATTTCAAATTCTTCTTGATAACTGACGAGTTTGGATTCGAAACT
TGTGTTGGTGGATGTCAGGGAACAGAGTTCGTGAGTTTCCAGGTGGGAAC
CGCTGGGAACTTCAGCGTGCGATGCGATGTGTATGACTCGCTCGGTTTCA
CTTTGCTTGCATCAGCGAGCGGAGGGAACATTTTGGTCACTAGCAGTGAT
AACAACGGAGCGGACCTTTCTTCGTTCGCTGCCGACGCTGAAGACGCTTT
TGTTGCCGGGGATCACTCAGATTACCATCAGGTAGGAACAGATATGGTGA
AGTTCGTGCTCTCCGCAGGAGGCAGCTCTTCAAGTACGGACTCTGAGGCG
CTTGCAAGCTTCACTGCGGGTTTGAATCAAATCGCCGGTAACTCGGTGCC
CAACGCAATCCAAAGCGCGGGATACGTGCGCACGGCAGCGGCTCTTGCCA
GTCTAACACCGGAGCTTGGCATCACATATAACACAGAGACTCTGTACTTC
TTGGTGAACATCACGATTAACGCTGTGCAACGAACGCCAGATACAGCTGC
GCTACAACAGCTGCAGGACCTTTTGGATTTCTACGACCTTACGCCAGAAC
TGATACTGGCGTCGTATTCGGAGGGCAGCTCGAGACGAAGGCTCCGACAG
GGCATGGAAGTGAGCGAAGAAGAAATCATTGGAATCTGGCTGGACATGTA
TGAAGTGATGAAGGAACAAATCGTACTTACGGCGTTGAAGAAATGCCCTT
GCGGCTGCGTGGAAGAGGTACGGACCGGAATCAGCGCAAAGGGGCGAGGC
GCACTAACTTCAAGACTGCAGAGTGTGCGACAGGAAAACGCCAACCTGAG
GTTAGCGTTGGACATTGGAATGCAGCAGGAATTGCAGTTCTCGTGGTGCA
AAGGGTTGTATGAGAATTCGATCAAGAGGTTGTACTTCGCCGTAGTGAAA
AGTCCAGATTACGTATACCTCTCACGACTACGGCGGGATGTGACTCTGAC
GGACGGGTTGTTCGGCATGGTGGTGGGTGTAATCCGCAACAACACGTTAC
AGGACGCGACGCTGGATATCAAGGACTGCTACGGGCTGCAGGTCCCGATT
GCGCGCGAAGTGGCGGAGGTGGAGGAAGACACTCCGGAGGATCAAGTGCC
GAAGGGGCTGTTGCTGCAGCCGCGCAAGAGGTGGGATGAGAACGTCTCTC
TCACTCTGTATGCGCCAGT