Gcaud7922.t1 (mRNA) Gracilaria caudata M_176_S67 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGcaud7922.t1
Unique NameGcaud7922.t1
TypemRNA
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length326
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_314_length_30704_cov_3.921177contigNODE_314_length_30704_cov_3.921177:20595..21572 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog28377.ENSACAP00000000020
Preferred nameADIPOR2
PFAMsHlyIII
Max annot lvl33208|Metazoa
KEGG koko:K07297
KEGG Pathwayko04152,ko04211,ko04920,ko04932,map04152,map04211,map04920,map04932
GOsGO:0001525,GO:0001558,GO:0001568,GO:0001944,GO:0002791,GO:0002793,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006950,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009611,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009889,GO:0009893,GO:0009987,GO:0010033,GO:0010565,GO:0010646,GO:0010647,GO:0010817,GO:0010827,GO:0010828,GO:0016020,GO:0016021,GO:0016500,GO:0019216,GO:0019217,GO:0019221,GO:0019222,GO:0019395,GO:0019752,GO:0019827,GO:0023051,GO:0023052,GO:0023056,GO:0030258,GO:0030308,GO:0030718,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0032024,GO:0032501,GO:0032502,GO:0032787,GO:0032870,GO:0032879,GO:0032880,GO:0033211,GO:0033500,GO:0034097,GO:0034440,GO:0034762,GO:0034764,GO:0035239,GO:0035295,GO:0036099,GO:0038023,GO:0040008,GO:0042060,GO:0042221,GO:0042304,GO:0042562,GO:0042592,GO:0042593,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045834,GO:0045923,GO:0045926,GO:0046320,GO:0046321,GO:0046324,GO:0046326,GO:0046883,GO:0046887,GO:0046890,GO:0046982,GO:0046983,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048646,GO:0048731,GO:0048856,GO:0048878,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0050796,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051128,GO:0051222,GO:0051223,GO:0051716,GO:0055088,GO:0055090,GO:0055100,GO:0055114,GO:0060055,GO:0060089,GO:0061042,GO:0062012,GO:0062013,GO:0065007,GO:0065008,GO:0070201,GO:0070328,GO:0070887,GO:0071310,GO:0071345,GO:0071495,GO:0071704,GO:0071944,GO:0072358,GO:0072359,GO:0080090,GO:0090087,GO:0090276,GO:0090277,GO:0097003,GO:0098727,GO:1903530,GO:1903532,GO:1904951,GO:1990522
Evalue1.65e-37
EggNOG OGsCOG1272@1|root,KOG0748@2759|Eukaryota,38C8H@33154|Opisthokonta,3BCS0@33208|Metazoa,3CTE5@33213|Bilateria,480T9@7711|Chordata,4901S@7742|Vertebrata
Descriptionadiponectin receptor
COG categoryT
BRITEko00000,ko00001
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7922Gcaud7922Gracilaria caudata M_176_S67 malegeneNODE_314_length_30704_cov_3.921177 20595..21572 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud7922.t1.start1Gcaud7922.t1.start1Gracilaria caudata M_176_S67 malestart_codonNODE_314_length_30704_cov_3.921177 20595..20597 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud7922.t1.CDS1Gcaud7922.t1.CDS1Gracilaria caudata M_176_S67 maleCDSNODE_314_length_30704_cov_3.921177 20595..21572 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud7922.t1.exon1Gcaud7922.t1.exon1Gracilaria caudata M_176_S67 maleexonNODE_314_length_30704_cov_3.921177 20595..21572 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud7922.t1.stop1Gcaud7922.t1.stop1Gracilaria caudata M_176_S67 malestop_codonNODE_314_length_30704_cov_3.921177 21570..21572 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud7922.t1Gcaud7922.t1Gracilaria caudata M_176_S67 malepolypeptideNODE_314_length_30704_cov_3.921177 20595..21572 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gcaud7922.t1 ID=Gcaud7922.t1|Name=Gcaud7922.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=326bp
MRDNDFVYSGYRPSHPSLRVVFISAFFTLHNDTINIWSHALGALFFLCVG
AYILGPATSTHRHLSRVAEACSQRAALTTADLYAHIKRLGVSNFCALDAH
HGAATLRHALATLLNSHRIGLLPLIVSAVLCLSFSAIFHAFWVHSPRALR
FLGKLDFLGISLLISGHAVSGIYYAFYCNPTLAHRYYAMVALAELATVPC
IFARAFGTPAARPFRVFVFSALTATVLVPLFHSIWLHTAALYELAVGVGS
ALTAICIYAMGAMFYVSRFPECCRMGKHDRFFASHQLLHIAVLLGVACHL
FGCCTLMEYRIDVGCSVSPLLNSNL*
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spliced messenger RNA

>Gcaud7922.t1 ID=Gcaud7922.t1|Name=Gcaud7922.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=978bp|location=Sequence derived from alignment at NODE_314_length_30704_cov_3.921177:20595..21572+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCGACAACGACTTTGTGTACAGCGGCTACCGTCCGTCACACCCGTC
GCTTCGCGTCGTGTTCATCAGCGCCTTTTTCACGCTCCATAACGACACCA
TCAACATCTGGAGCCACGCGCTCGGCGCGCTGTTCTTCCTGTGCGTGGGC
GCGTACATTTTGGGCCCCGCCACGTCCACGCACCGCCATCTGTCGCGCGT
GGCCGAGGCGTGTTCGCAGCGCGCCGCGCTCACCACCGCCGATCTGTACG
CGCACATCAAGCGGCTGGGCGTGTCCAATTTCTGCGCGCTGGACGCGCAC
CACGGCGCCGCCACGCTGCGCCACGCGCTGGCCACGCTGCTCAATTCGCA
TCGCATCGGGCTGCTACCGCTCATTGTGTCCGCGGTGCTGTGTCTGTCCT
TCTCCGCCATTTTCCACGCCTTCTGGGTGCATTCTCCGCGCGCGTTGCGC
TTCTTGGGCAAGCTGGATTTCCTGGGCATTTCGTTGCTCATCAGTGGGCA
CGCCGTGTCGGGCATTTACTACGCCTTCTACTGCAACCCTACGCTGGCGC
ATCGCTACTACGCGATGGTTGCGCTGGCCGAGTTGGCCACCGTGCCGTGC
ATCTTTGCGCGCGCGTTTGGCACGCCGGCCGCGCGTCCGTTCCGCGTGTT
TGTGTTCTCGGCGCTCACCGCTACCGTGTTGGTGCCGCTGTTTCATTCCA
TCTGGCTGCACACCGCCGCGCTGTACGAACTGGCGGTGGGCGTGGGATCG
GCGCTCACCGCCATCTGCATCTACGCCATGGGCGCCATGTTTTATGTGTC
GCGCTTTCCGGAGTGCTGCCGCATGGGAAAGCACGATCGCTTCTTTGCGT
CGCACCAGCTGCTGCACATTGCGGTGTTGCTGGGCGTGGCGTGCCATCTT
TTTGGATGCTGCACGCTCATGGAATATCGCATCGACGTCGGATGTTCCGT
CAGTCCTCTGCTCAACAGCAATCTGTAA
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protein sequence of Gcaud7922.t1

>Gcaud7922.t1 ID=Gcaud7922.t1|Name=Gcaud7922.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=326bp
MRDNDFVYSGYRPSHPSLRVVFISAFFTLHNDTINIWSHALGALFFLCVG
AYILGPATSTHRHLSRVAEACSQRAALTTADLYAHIKRLGVSNFCALDAH
HGAATLRHALATLLNSHRIGLLPLIVSAVLCLSFSAIFHAFWVHSPRALR
FLGKLDFLGISLLISGHAVSGIYYAFYCNPTLAHRYYAMVALAELATVPC
IFARAFGTPAARPFRVFVFSALTATVLVPLFHSIWLHTAALYELAVGVGS
ALTAICIYAMGAMFYVSRFPECCRMGKHDRFFASHQLLHIAVLLGVACHL
FGCCTLMEYRIDVGCSVSPLLNSNL*
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mRNA from alignment at NODE_314_length_30704_cov_3.921177:20595..21572+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gcaud7922.t1 ID=Gcaud7922.t1|Name=Gcaud7922.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=978bp|location=Sequence derived from alignment at NODE_314_length_30704_cov_3.921177:20595..21572+ (Gracilaria caudata M_176_S67 male)
ATGCGCGACAACGACTTTGTGTACAGCGGCTACCGTCCGTCACACCCGTC
GCTTCGCGTCGTGTTCATCAGCGCCTTTTTCACGCTCCATAACGACACCA
TCAACATCTGGAGCCACGCGCTCGGCGCGCTGTTCTTCCTGTGCGTGGGC
GCGTACATTTTGGGCCCCGCCACGTCCACGCACCGCCATCTGTCGCGCGT
GGCCGAGGCGTGTTCGCAGCGCGCCGCGCTCACCACCGCCGATCTGTACG
CGCACATCAAGCGGCTGGGCGTGTCCAATTTCTGCGCGCTGGACGCGCAC
CACGGCGCCGCCACGCTGCGCCACGCGCTGGCCACGCTGCTCAATTCGCA
TCGCATCGGGCTGCTACCGCTCATTGTGTCCGCGGTGCTGTGTCTGTCCT
TCTCCGCCATTTTCCACGCCTTCTGGGTGCATTCTCCGCGCGCGTTGCGC
TTCTTGGGCAAGCTGGATTTCCTGGGCATTTCGTTGCTCATCAGTGGGCA
CGCCGTGTCGGGCATTTACTACGCCTTCTACTGCAACCCTACGCTGGCGC
ATCGCTACTACGCGATGGTTGCGCTGGCCGAGTTGGCCACCGTGCCGTGC
ATCTTTGCGCGCGCGTTTGGCACGCCGGCCGCGCGTCCGTTCCGCGTGTT
TGTGTTCTCGGCGCTCACCGCTACCGTGTTGGTGCCGCTGTTTCATTCCA
TCTGGCTGCACACCGCCGCGCTGTACGAACTGGCGGTGGGCGTGGGATCG
GCGCTCACCGCCATCTGCATCTACGCCATGGGCGCCATGTTTTATGTGTC
GCGCTTTCCGGAGTGCTGCCGCATGGGAAAGCACGATCGCTTCTTTGCGT
CGCACCAGCTGCTGCACATTGCGGTGTTGCTGGGCGTGGCGTGCCATCTT
TTTGGATGCTGCACGCTCATGGAATATCGCATCGACGTCGGATGTTCCGT
CAGTCCTCTGCTCAACAGCAATCTGTAA
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Coding sequence (CDS) from alignment at NODE_314_length_30704_cov_3.921177:20595..21572+

>Gcaud7922.t1 ID=Gcaud7922.t1|Name=Gcaud7922.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=978bp|location=Sequence derived from alignment at NODE_314_length_30704_cov_3.921177:20595..21572+ (Gracilaria caudata M_176_S67 male)
ATGCGCGACAACGACTTTGTGTACAGCGGCTACCGTCCGTCACACCCGTC
GCTTCGCGTCGTGTTCATCAGCGCCTTTTTCACGCTCCATAACGACACCA
TCAACATCTGGAGCCACGCGCTCGGCGCGCTGTTCTTCCTGTGCGTGGGC
GCGTACATTTTGGGCCCCGCCACGTCCACGCACCGCCATCTGTCGCGCGT
GGCCGAGGCGTGTTCGCAGCGCGCCGCGCTCACCACCGCCGATCTGTACG
CGCACATCAAGCGGCTGGGCGTGTCCAATTTCTGCGCGCTGGACGCGCAC
CACGGCGCCGCCACGCTGCGCCACGCGCTGGCCACGCTGCTCAATTCGCA
TCGCATCGGGCTGCTACCGCTCATTGTGTCCGCGGTGCTGTGTCTGTCCT
TCTCCGCCATTTTCCACGCCTTCTGGGTGCATTCTCCGCGCGCGTTGCGC
TTCTTGGGCAAGCTGGATTTCCTGGGCATTTCGTTGCTCATCAGTGGGCA
CGCCGTGTCGGGCATTTACTACGCCTTCTACTGCAACCCTACGCTGGCGC
ATCGCTACTACGCGATGGTTGCGCTGGCCGAGTTGGCCACCGTGCCGTGC
ATCTTTGCGCGCGCGTTTGGCACGCCGGCCGCGCGTCCGTTCCGCGTGTT
TGTGTTCTCGGCGCTCACCGCTACCGTGTTGGTGCCGCTGTTTCATTCCA
TCTGGCTGCACACCGCCGCGCTGTACGAACTGGCGGTGGGCGTGGGATCG
GCGCTCACCGCCATCTGCATCTACGCCATGGGCGCCATGTTTTATGTGTC
GCGCTTTCCGGAGTGCTGCCGCATGGGAAAGCACGATCGCTTCTTTGCGT
CGCACCAGCTGCTGCACATTGCGGTGTTGCTGGGCGTGGCGTGCCATCTT
TTTGGATGCTGCACGCTCATGGAATATCGCATCGACGTCGGATGTTCCGT
CAGTCCTCTGCTCAACAGCAATCTGTAA
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