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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 225117.XP_009337443.1 |
| PFAMs | Mito_carr |
| Max annot lvl | 35493|Streptophyta |
| KEGG ko | ko:K15111 |
| KEGG TC | 2.A.29.18 |
| GOs | GO:0000095,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006839,GO:0006855,GO:0006996,GO:0008150,GO:0009507,GO:0009526,GO:0009536,GO:0009657,GO:0009658,GO:0009941,GO:0009987,GO:0015238,GO:0015805,GO:0015893,GO:0016020,GO:0016021,GO:0016043,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031969,GO:0031975,GO:0042170,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051179,GO:0051181,GO:0051182,GO:0051184,GO:0051185,GO:0051234,GO:0055085,GO:0071702,GO:0071840,GO:0072348,GO:1901682,GO:1901962 |
| Evalue | 4.73e-38 |
| EggNOG OGs | KOG0768@1|root,KOG0768@2759|Eukaryota,37KH0@33090|Viridiplantae,3G7KW@35493|Streptophyta,4JNC0@91835|fabids |
| Description | Belongs to the mitochondrial carrier (TC 2.A.29) family |
| COG category | C |
| BRITE | ko00000,ko02000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud7519.t1.stop1 | Gcaud7519.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_51_length_65224_cov_4.623524 3944..3946 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud7519.t1.start1 | Gcaud7519.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_51_length_65224_cov_4.623524 8426..8428 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud7519.t1 ID=Gcaud7519.t1|Name=Gcaud7519.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=546bp MRKMSQVEKAILKPSINLDILSQHSDAQLASTFAGVTSRILLHPVDCVKT RLQYIRGRPGSSDASRHLIRFIASEGLPGLYRGIIGALAGVLPYSMLYMP SYELAQMQLSRFGRDKLLGIRHVVAGSFAGLCGSLVKVPVDVVKKRLQAG IYPHVGAAVTSIASEGNGFAGGFRQFYTGWRSSIIYDVPYSAIQFTVLEN VKQCVRRLKRSELVGGDHVIVGALTGMITSVITEPLDVIKTRLMTQRMKG VRPGLTMYRGWLHWHHYQRRWNRRQSVRLNDSRSRNVEFPGMHNASRTVS AQRHDKKNRSGQTSAQELVSGLNTQRPGSSPADTEGWVNARKANWPSTTN VEQKQAAALKRQKVGALDCTSRNAAQVKHRFDRSQRDLDASRNVLSRLNA KLPGSSPEEIEAWVRARKANWPSRRNVERKLAAAAEERNRTEKRISIAKS APEALAKLADYSSSEDDDEKVERKQKEAPAKRGKRTRKKQGGRGKNNRST RRLQVQNERKPTLLRMLLEREIRQEQSILLQAFRYIITKKASEMT* back to topspliced messenger RNA >Gcaud7519.t1 ID=Gcaud7519.t1|Name=Gcaud7519.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1638bp|location=Sequence derived from alignment at NODE_51_length_65224_cov_4.623524:3944..8428- (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGCGCAAAATGAGCCAAGTGGAAAAGGCGATATTGAAGCCATCTATCAA TCTTGATATTCTTAGTCAGCACTCCGATGCGCAACTGGCCTCTACGTTTG CCGGTGTCACGAGTCGAATTCTTTTGCACCCCGTGGACTGCGTCAAAACG AGGTTGCAGTACATTCGCGGTCGCCCCGGTTCTAGCGATGCATCGAGACA TCTGATCCGTTTCATTGCATCTGAAGGATTACCGGGCCTGTATCGTGGCA TTATTGGCGCGCTGGCAGGAGTGCTGCCCTATTCAATGCTTTATATGCCG AGTTACGAGCTCGCTCAAATGCAGCTGTCACGTTTTGGACGGGACAAGCT ACTCGGTATTCGCCATGTCGTTGCCGGTTCGTTTGCCGGTCTTTGTGGTT CGCTTGTTAAGGTGCCTGTCGATGTGGTCAAGAAACGCTTGCAGGCCGGC ATATACCCTCATGTAGGCGCTGCTGTCACGTCCATTGCTTCCGAGGGCAA CGGTTTTGCGGGTGGATTCCGTCAATTCTACACTGGTTGGCGAAGCTCTA TTATTTACGACGTGCCATACAGTGCTATCCAGTTTACCGTGCTTGAGAAT GTGAAGCAGTGCGTGAGGCGCTTGAAAAGAAGTGAACTGGTAGGGGGCGA CCATGTAATTGTTGGTGCACTGACAGGGATGATAACCTCTGTGATAACTG AGCCACTTGATGTTATCAAGACCAGGTTAATGACACAGCGAATGAAAGGC GTTCGGCCTGGATTAACAATGTACCGCGGATGGCTTCACTGGCACCACTA TCAGCGTCGATGGAACCGTCGTCAGTCAGTTCGTCTCAATGACAGCAGGA GTCGGAATGTCGAATTCCCTGGCATGCATAACGCCTCTAGAACCGTAAGC GCTCAGCGACATGATAAGAAAAATAGAAGTGGTCAGACCTCCGCACAAGA GCTCGTTTCAGGATTAAATACCCAACGCCCTGGATCATCACCTGCTGATA CAGAAGGCTGGGTGAACGCAAGGAAAGCTAACTGGCCAAGCACAACGAAC GTTGAGCAAAAACAAGCCGCCGCTCTGAAGCGCCAAAAAGTTGGTGCGCT GGATTGCACATCTCGTAATGCAGCACAAGTTAAACATAGATTTGACCGTA GTCAGCGCGATTTAGATGCATCTCGAAACGTGCTATCCCGACTTAACGCA AAGCTGCCTGGTTCATCTCCTGAAGAAATTGAAGCTTGGGTGAGAGCCCG AAAAGCAAACTGGCCCAGTCGAAGAAATGTTGAGCGAAAGTTAGCAGCCG CAGCAGAGGAAAGGAACCGGACAGAGAAAAGGATAAGCATTGCGAAGAGT GCTCCGGAAGCATTGGCAAAGCTGGCGGACTACAGCAGCAGTGAAGATGA CGATGAAAAGGTGGAAAGGAAACAGAAGGAAGCTCCTGCAAAGCGTGGGA AACGGACGCGGAAGAAGCAGGGAGGACGCGGTAAAAATAATCGCTCAACG AGAAGGCTGCAAGTGCAGAACGAACGGAAGCCGACGTTGTTGAGAATGCT TCTGGAGAGAGAGATTAGACAAGAGCAGTCTATTCTACTGCAGGCATTTC GTTACATCATCACCAAGAAGGCATCTGAAATGACATAG back to topprotein sequence of Gcaud7519.t1 >Gcaud7519.t1 ID=Gcaud7519.t1|Name=Gcaud7519.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=546bp
MRKMSQVEKAILKPSINLDILSQHSDAQLASTFAGVTSRILLHPVDCVKT RLQYIRGRPGSSDASRHLIRFIASEGLPGLYRGIIGALAGVLPYSMLYMP SYELAQMQLSRFGRDKLLGIRHVVAGSFAGLCGSLVKVPVDVVKKRLQAG IYPHVGAAVTSIASEGNGFAGGFRQFYTGWRSSIIYDVPYSAIQFTVLEN VKQCVRRLKRSELVGGDHVIVGALTGMITSVITEPLDVIKTRLMTQRMKG VRPGLTMYRGWLHWHHYQRRWNRRQSVRLNDSRSRNVEFPGMHNASRTVS AQRHDKKNRSGQTSAQELVSGLNTQRPGSSPADTEGWVNARKANWPSTTN VEQKQAAALKRQKVGALDCTSRNAAQVKHRFDRSQRDLDASRNVLSRLNA KLPGSSPEEIEAWVRARKANWPSRRNVERKLAAAAEERNRTEKRISIAKS APEALAKLADYSSSEDDDEKVERKQKEAPAKRGKRTRKKQGGRGKNNRST RRLQVQNERKPTLLRMLLEREIRQEQSILLQAFRYIITKKASEMT* back to topmRNA from alignment at NODE_51_length_65224_cov_4.623524:3944..8428- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud7519.t1 ID=Gcaud7519.t1|Name=Gcaud7519.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=4485bp|location=Sequence derived from alignment at NODE_51_length_65224_cov_4.623524:3944..8428- (Gracilaria caudata M_176_S67 male) ATGCGCAAAATGAGGTAAGTTGGTTGAGCCCCCAAATTCTGAATTTCAGT
TATTTTTGATGAGGATGGCATGTGGAGCAGTATGCCACATGAGTGACAGC
ACCAAGACAGGAGCTTCCCGAAGACGTTCTGAGGTTCATGAGTTGACGTT
GTTACTAACAACGGCAACAACTTCGTAGCCTCTACCTTCTCACTTTTGAG
GCGATACCCTCGATTTGGCCAATTCTCTAGACTTCCACTCCCATTTAGCT
CTTGATTAATCAAGATTGTGCTTTCCATACACAAACACTTTTTGCCAGCC
AAGTGGAAAAGGCGATATTGAAGCCATCTATCAATCTTGAGTTCAGTTCT
CTCGTTTCGCTACCAACATGATCACTAACAGAAAGCCTTCTGCTAACGCC
CTTCTGTGTGAAAACTCTCGGCGCGCGTCTGTATCGCCCCGGCGAAGTAT
TCTTAGTCAGCACTCCGATGCGCAACTGGCCTCTACGTTTGCCGGTGTCA
CGAGTCGAATTCTTTTGCACCCCGTGGACTGCGTCAAAACGAGGTTGCAG
TACATTCGCGGTCGCCCCGGTTCTAGCGATGCATCGAGACATCTGATCCG
TTTCATTGCATCTGAAGGATTACCGGGCCTGTATCGTGGCATTATTGGCG
CGCTGGCAGGAGTGCTGCCCTATTCAATGCGTGCGTTCGTTCTCCCTCTC
CCTCTCCCTCTTTCTCTGTACTCGTTCTCAGTCACTAACATAGCCCGCTG
TGTGTAGTTTATATGCCGAGTTACGAGCTCGCTCAAATGCAGCTGTCACG
TTTTGGACGGGACAAGCTACTCGGTATTCGCCATGTCGTTGCCGGTTCGT
TTGCCGGTCTTTGTGGTTCGCTTGTTAAGGTGCCTGTCGATGTGGTCAAG
AAACGCTTGCAGGCCGGCATATACCCTCATGTAGGCGCTGCTGTCACGTC
CATTGCTTCCGAGGGCAACGGTTTTGCGGGTGGATTCCGTCAATTCTACA
CTGGTTGGCGAAGCTCTATTATTTACGACGTGCCATACAGTGCTATCCAG
TTTACCGTGCTTGAGAATGTGAAGCAGTGCGTGAGGCGCTTGAAAAGAAG
TGAACTGGTAGGGGGCGACCATGTAATTGTTGGTGCACTGACAGGGATGA
TAACCTCTGTGATAACTGAGCCAGTAAGTTTTGCATAGGATTCGCCGATG
TTTTTATCACAGTGACTTTTCTAACTCATGATTAACGAACTCAGCTTGAT
GTTATCAAGACCAGGTTAATGACACAGCGAATGAAAGGCGTTCGGCCTGG
ATTAACAATGTACCGCGGATGGCTTCACTGTATGCGGACAATAGTACATG
AGGAGGGTCCTCTGGCTTTATGGAAGGGAACGCTTCCTCGCCTTATTTGG
GTTGGCGCAAGTAGCGCAATTTGGTATGGCACTTACCAAGCTGTTCGCCA
ATCTATGAACCAGAAAAGGCAATTGGCAGCGAATAGAGAAAGAGATGTGT
CGGGTTCTCAAGGAGTGAAATGAGCTTGTGCGTGGGCATTCCACTTGTTG
GATATGCACCACTCTTGTGTCCGCGGCTTACTCTTTTGATCACTGGCCAA
GTCCAAGAGTGTCCTACACTCTGCTTATCTACTTCATACCAACGCCAAAA
AGCGAATCAAAGCAACTCCAGGACAAGATTGAAACGTCCTCCTGTGCTTC
AGAACCATTCATATTGGTTACGGACGGGCTCAAAATAGGTTTCCCTGTCG
GCCGTCGAAGGATTTTGCGCTGTGTGGGAACTAACTCAACACAATCATCT
GCCTGTATTGCTTGCCTGTATGAAATGCAGAGTAACTGAAGTTCGTTTTC
AAGATAAAAGTTTGAGGACGGAGGCTCTGATCACGGATTTTGACGAACAT
GATATCTGATCCGTTTGACCGGAGGTTCACCCATAGCAATTTCGTCGTTT
TGGGCTCGCAGCTTGCCCTGTATCAACAATGTTTAATACTATTAGCGAGC
AACGCAAATTGCCGAGTTGAGGTGCTATACTAGCAGCTGGTTGCCACTCT
TTTGCTGGTTTGGTACCTATCACATAGAGCCGAACGTTCTTTAGGTGTCC
TTGAGGAGTGAGACAGTCTTTTTTCAGCAACTTCTACATTGAAGGACTAA
CGGTTTCACTTTTTATCTGGTATTCTCAAAGACAATCCGTACCTTTGTTA
GTCTGAGTATTCCATCGAGCCTAAATTAACAGCGTTTTGGTTGTTGATGA
AGCAGATCATTTGATCATGTTCCAGTCGATAATGTTACAAGAATGGCTCC
TTGCCATTGTCCTTTATTCTCTCCATTTTATGGATTGGGCCCGACAGCAG
CCCTTGAAATTTAAATGTAGAAGCTGTCCCGAGGTAATCTTTGGCTCCAA
GAATCTTGGCCCATAGGAACAGATTGGCTTTCAAGTATGCTCGGGAACGG
GAACATTCACGGTCCACCAACTTGAACAACGATGTTTAAAAGGTCTTCTT
TATCCAAACTTAGCTTTCCTGGATCTACTGTTCTCCCAACATCTTTCAGC
TCTTTTGCAATATCCACGACTTGTCATGTAGGGGCAAATCACTATGGAGT
TGCAGAGAAATCTACTCCACATGTTTAAGAACACAACTGGTAAATATTGA
GACTCTTGAGTAACTGAGTGGTCTCCTTGTACCTTCATAAGCCGTTACGA
AGATAGCTGGTAACCTTTTGGCCCTTGTAGCGAAAACGATGCCTACCGTC
GTACGAACTTCGTACTGCGAAGAACAAATCCGATTGTGAACAGGACGAAG
AAACGAACGGATGGTTTCACTGCATGGCCAAAAGTGTCGACGCTTGATAC
TGTAGCGCGCAGCGCCCCAGTTATCATACATGCATCATGACCATCATGAT
GATGGTCATGCAAGGGTAGAACGCTAGTAGATAGCGTTCTTTGTACACAT
TCATGATCATCAGCGTTCTTTGTTTGTACCTTTGTACACATGCATACAAA
CAAACAAACTGCAAACCCGCGTCAATTGGACTTTGTGAACTTCGATTAGC
AGACTTACAAAATTGCATTAAATTAAACCACGGGCATGTGGACGACGTGG
GTAACTTCGAAAACGCTTGTTTTTGCTTCTGCGAGCTTCTTTCCCGTCTT
CACCGCAACGCAACCCTATTCTATATCTTCGCAACGGCGAGAGATAATAG
TACAAGCACGAGAATCAGATTAACAGGTACTGGGTTTTAGAGGAAGAGAA
CCATCTGTACGTTTTTGGAACACTCTGCATAAAGCGTGACGCTGCGGATT
TAAGTTCAAGAGACAGCATTTGAAGTCTGAATGACTTGGCCATGGCCTAC
CCCTCAACACCTTGCATATACCCAGCAAGCACTTGGCGCGCATCCGCCCC
AAGTCCAGAATCCTCACCCGCCGTATATACCCCCGCCACCGCCCCCTATA
GCCCAACTGTTACCGCCAGTCAATTTCTATTCGAACCCACCCATCCCAAC
TGTTCCACCGAGCTTCAGCCAGTTCTCACTACCCTCTCCTCAACTACAGC
AGACCATTCAATGCGATGCAAATCCACCATACTTTCCTTCGCAAAATGAA
ACAGCAACCGGGCGACATCATTCTCGACTTCTAACAGGGCACCACTATCA
GCGTCGATGGAACCGTCGTCAGTCAGTTCGTCTCAATGACAGCAGGAGTC
GGAATGTCGAATTCCCTGGCATGCATAACGCCTCTAGAACCGTAAGCGCT
CAGCGACATGATAAGAAAAATAGAAGTGGTCAGACCTCCGCACAAGAGCT
CGTTTCAGGATTAAATACCCAACGCCCTGGATCATCACCTGCTGATACAG
AAGGCTGGGTGAACGCAAGGAAAGCTAACTGGCCAAGCACAACGAACGTT
GAGCAAAAACAAGCCGCCGCTCTGAAGCGCCAAAAAGTTGGTGCGCTGGA
TTGCACATCTCGTAATGCAGCACAAGTTAAACATAGATTTGACCGTAGTC
AGCGCGATTTAGATGCATCTCGAAACGTGCTATCCCGACTTAACGCAAAG
CTGCCTGGTTCATCTCCTGAAGAAATTGAAGCTTGGGTGAGAGCCCGAAA
AGCAAACTGGCCCAGTCGAAGAAATGTTGAGCGAAAGTTAGCAGCCGCAG
CAGAGGAAAGGAACCGGACAGAGAAAAGGATAAGCATTGCGAAGAGTGCT
CCGGAAGCATTGGCAAAGCTGGCGGACTACAGCAGCAGTGAAGATGACGA
TGAAAAGGTGGAAAGGAAACAGAAGGAAGCTCCTGCAAAGCGTGGGAAAC
GGACGCGGAAGAAGCAGGGAGGACGCGGTAAAAATAATCGCTCAACGAGA
AGGCTGCAAGTGCAGAACGAACGGAAGCCGACGTTGTTGAGAATGCTTCT
GGAGAGAGAGATTAGACAAGAGCAGTCTATTCTACTGCAGGCATTTCGTT
ACATCATCACCAAGAAGGCATCTGAAATGACATAG back to topCoding sequence (CDS) from alignment at NODE_51_length_65224_cov_4.623524:3944..8428- >Gcaud7519.t1 ID=Gcaud7519.t1|Name=Gcaud7519.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=1638bp|location=Sequence derived from alignment at NODE_51_length_65224_cov_4.623524:3944..8428- (Gracilaria caudata M_176_S67 male) ATGCGCAAAATGAGCCAAGTGGAAAAGGCGATATTGAAGCCATCTATCAA TCTTGATATTCTTAGTCAGCACTCCGATGCGCAACTGGCCTCTACGTTTG CCGGTGTCACGAGTCGAATTCTTTTGCACCCCGTGGACTGCGTCAAAACG AGGTTGCAGTACATTCGCGGTCGCCCCGGTTCTAGCGATGCATCGAGACA TCTGATCCGTTTCATTGCATCTGAAGGATTACCGGGCCTGTATCGTGGCA TTATTGGCGCGCTGGCAGGAGTGCTGCCCTATTCAATGCTTTATATGCCG AGTTACGAGCTCGCTCAAATGCAGCTGTCACGTTTTGGACGGGACAAGCT ACTCGGTATTCGCCATGTCGTTGCCGGTTCGTTTGCCGGTCTTTGTGGTT CGCTTGTTAAGGTGCCTGTCGATGTGGTCAAGAAACGCTTGCAGGCCGGC ATATACCCTCATGTAGGCGCTGCTGTCACGTCCATTGCTTCCGAGGGCAA CGGTTTTGCGGGTGGATTCCGTCAATTCTACACTGGTTGGCGAAGCTCTA TTATTTACGACGTGCCATACAGTGCTATCCAGTTTACCGTGCTTGAGAAT GTGAAGCAGTGCGTGAGGCGCTTGAAAAGAAGTGAACTGGTAGGGGGCGA CCATGTAATTGTTGGTGCACTGACAGGGATGATAACCTCTGTGATAACTG AGCCACTTGATGTTATCAAGACCAGGTTAATGACACAGCGAATGAAAGGC GTTCGGCCTGGATTAACAATGTACCGCGGATGGCTTCACTGGCACCACTA TCAGCGTCGATGGAACCGTCGTCAGTCAGTTCGTCTCAATGACAGCAGGA GTCGGAATGTCGAATTCCCTGGCATGCATAACGCCTCTAGAACCGTAAGC GCTCAGCGACATGATAAGAAAAATAGAAGTGGTCAGACCTCCGCACAAGA GCTCGTTTCAGGATTAAATACCCAACGCCCTGGATCATCACCTGCTGATA CAGAAGGCTGGGTGAACGCAAGGAAAGCTAACTGGCCAAGCACAACGAAC GTTGAGCAAAAACAAGCCGCCGCTCTGAAGCGCCAAAAAGTTGGTGCGCT GGATTGCACATCTCGTAATGCAGCACAAGTTAAACATAGATTTGACCGTA GTCAGCGCGATTTAGATGCATCTCGAAACGTGCTATCCCGACTTAACGCA AAGCTGCCTGGTTCATCTCCTGAAGAAATTGAAGCTTGGGTGAGAGCCCG AAAAGCAAACTGGCCCAGTCGAAGAAATGTTGAGCGAAAGTTAGCAGCCG CAGCAGAGGAAAGGAACCGGACAGAGAAAAGGATAAGCATTGCGAAGAGT GCTCCGGAAGCATTGGCAAAGCTGGCGGACTACAGCAGCAGTGAAGATGA CGATGAAAAGGTGGAAAGGAAACAGAAGGAAGCTCCTGCAAAGCGTGGGA AACGGACGCGGAAGAAGCAGGGAGGACGCGGTAAAAATAATCGCTCAACG AGAAGGCTGCAAGTGCAGAACGAACGGAAGCCGACGTTGTTGAGAATGCT TCTGGAGAGAGAGATTAGACAAGAGCAGTCTATTCTACTGCAGGCATTTC GTTACATCATCACCAAGAAGGCATCTGAAATGACATAG back to top
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