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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 72019.SARC_02838T0 |
| PFAMs | ABC_membrane,ABC_tran |
| Max annot lvl | 33154|Opisthokonta |
| KEGG ko | ko:K05658 |
| KEGG TC | 3.A.1.201 |
| KEGG Pathway | ko02010,ko04976,ko05206,ko05226,map02010,map04976,map05206,map05226 |
| Evalue | 8.95e-128 |
| EggNOG OGs | COG1132@1|root,KOG0055@2759|Eukaryota,38E88@33154|Opisthokonta |
| EC | 3.6.3.44 |
| Description | ATPase activity, coupled to transmembrane movement of substances |
| COG category | Q |
| BRITE | ko00000,ko00001,ko01000,ko02000,ko04090,ko04147 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud7360.t1.start1 | Gcaud7360.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_85_length_54060_cov_4.846356 2220..2222 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud7360.t1.stop1 | Gcaud7360.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_85_length_54060_cov_4.846356 6274..6276 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud7360.t1 ID=Gcaud7360.t1|Name=Gcaud7360.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=641bp MDGDAIPETNGSSTPPDQTKSSDDQQGKKSIFDCFKKKESDDKKDSSETQ PEPSKPPPVKFRELFRYANRTEKIYIIISCISAIIHGAIQPMFTILFGGI IDEFQGTTQTQPDPSILDGITDQVGDVAKWFLLLGAVAFVTSLIQVRFQL IAAQRICARLRRLYFESLLSQDFTWYGQEDGGELTARVAGDVNLIQAGIG DKVTSAVQFIAMFIVGFIVAFIYGPLLTLVMLSILPLMMAGGAVFAKMAA ESTGEGVGAYGGAGAVASEVIGLIRVVTAYNGQETEAKRYEDELRKAYKA DVKKGFVTGLGIGFTMFVIFCGYAIAFTFGANRVRGGSITAGDILVTFFS VFIASFSIGQAAPSFKAFAVAQGAAPRVYEVIGRESEINPLNEDDGDIIM DFKGNVSFNNVNFDYQHRVADDLESDEERRFVLNNFTLNVPSGTGSLLID DSNIVEYDVKWMRKHLGLVAQEPDLFNRSVRDNIAYGLDHVDGTPVTDEM IIEAAKAANADSFITELEEGYDTVVGARGSKLSGGQRQRVAIARAIVRQP RILVLDEATSALDAVSERVVQEALDRVGKGRTTIAVAHRLSTVKDADAIA VVGRGKILEIGRHEELLRIENGEYANLVKNQLSGGEESGE* back to topspliced messenger RNA >Gcaud7360.t1 ID=Gcaud7360.t1|Name=Gcaud7360.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1923bp|location=Sequence derived from alignment at NODE_85_length_54060_cov_4.846356:2220..6276+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGACGGTGACGCCATCCCCGAAACCAACGGGTCTTCCACTCCGCCTGA TCAGACCAAATCTTCTGACGATCAACAGGGAAAGAAATCTATTTTTGATT GCTTCAAGAAGAAAGAAAGCGACGACAAGAAGGACTCATCAGAGACACAA CCCGAACCCTCAAAGCCTCCGCCCGTCAAGTTCCGAGAACTATTTCGATA TGCGAACCGTACAGAGAAGATATACATTATCATTTCATGCATTTCCGCGA TAATTCACGGCGCTATACAGCCAATGTTCACCATTCTATTCGGTGGTATT ATTGATGAATTTCAAGGAACCACTCAAACTCAACCTGATCCATCCATACT CGATGGAATAACAGATCAGGTTGGCGATGTTGCTAAATGGTTTCTTTTGC TGGGTGCTGTTGCTTTCGTCACCAGTCTCATACAAGTTCGCTTCCAACTC ATTGCAGCTCAGCGAATTTGTGCCCGTTTGCGTCGCTTGTATTTCGAATC GCTTCTGAGCCAGGATTTCACGTGGTATGGACAGGAGGACGGAGGGGAGC TTACCGCAAGAGTAGCTGGTGATGTGAACTTGATTCAAGCAGGCATCGGT GACAAGGTCACCAGTGCGGTGCAGTTTATTGCCATGTTCATTGTCGGCTT TATCGTTGCCTTTATCTATGGGCCTTTGTTGACATTGGTTATGCTCTCCA TTCTGCCCTTGATGATGGCCGGTGGCGCTGTGTTCGCCAAAATGGCTGCG GAAAGTACCGGAGAGGGCGTAGGCGCGTATGGTGGTGCTGGCGCCGTTGC GAGTGaggtcataggtcttattcgtgtcgtcaccgcgtacaacggccagg aaacggaagcaaagcgatatgaggacgagctacggaaggcatacaaagct gatgtcaagaagggttttgtcactggtttgggcattgggttcaccatgtt cgttatcttctgcggatatgccatagccttcacgttcggtgcgaaccgag ttcgaggtggatccatcaccgctggtgatattctcgttacttttttctcc gtcttcatcgcgtcgttttctatcgggcaagCGGCACCGTCTTTCAAAGC CTTTGCTGTGGCACAAGGCGCAGCCCCAAGAGTGTATGAAGTTATTGGCA GAGAATCTGAAATCAACCCCCTGAACGAGGATGACGGAGATATTATTATG GACTTCAAGGGAAACGTAAGCTTCAATAACGTAAACTTCGATTACCAGCA CCGGGTTGCTGATGATTTGGAAAGTGACGAAGAAAGGCGCTTTGTGCTGA ATAACTTCACGCTCAACGTTCCATCCggcacCGGAAGTTTGCTGATCGAT GACAGCAACATTGTGGAGTACGATGTGAAATGGATGCGCAAGCATCTGGG ACTGGTGGCGCAAGAACCGGATCTGTTCAACCGCTCGGTGCGCGATAACA TCGCGTACGGACTGGACCACGTGGATGGCACGCCCGTGACAGACGAAATG ATTATTGAGGCGGCTAAAGCGGCGAATGCTGACTCGTTCATCACGGAACT GGAGGAGGGATACGACACGGTGGTGGGGGCGCGCGGCAGCAAACTGTCCG GCGGACAGCGCCAGCGGGTGGCGATCGCGCGCGCGATCGTGCGACAGCCG AGAATTCTGGTGCTGGACGAGGCTACGTCGGCGCTTGACGCGGTGTCGGA GCGCGTGGTGCAGGAGGCCTTGGACCGGGTGGGCAAGGGACGCACGACGA TTGCTGTGGCTCACCGTCTGTCGACGGTGAAGGACGCTGACGCGATCGCG GTGGTGGGGCGCGGGAAGATCTTGGAGATCGGACGACATGAAGAGTTGCT GAGGATTGAGAACGGGGAGTACGCGAATCTGGTGAAGAACCAATTGAGCG GTGGGGAGGAGAGTGGGGAGTGA back to topprotein sequence of Gcaud7360.t1 >Gcaud7360.t1 ID=Gcaud7360.t1|Name=Gcaud7360.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=641bp
MDGDAIPETNGSSTPPDQTKSSDDQQGKKSIFDCFKKKESDDKKDSSETQ PEPSKPPPVKFRELFRYANRTEKIYIIISCISAIIHGAIQPMFTILFGGI IDEFQGTTQTQPDPSILDGITDQVGDVAKWFLLLGAVAFVTSLIQVRFQL IAAQRICARLRRLYFESLLSQDFTWYGQEDGGELTARVAGDVNLIQAGIG DKVTSAVQFIAMFIVGFIVAFIYGPLLTLVMLSILPLMMAGGAVFAKMAA ESTGEGVGAYGGAGAVASEVIGLIRVVTAYNGQETEAKRYEDELRKAYKA DVKKGFVTGLGIGFTMFVIFCGYAIAFTFGANRVRGGSITAGDILVTFFS VFIASFSIGQAAPSFKAFAVAQGAAPRVYEVIGRESEINPLNEDDGDIIM DFKGNVSFNNVNFDYQHRVADDLESDEERRFVLNNFTLNVPSGTGSLLID DSNIVEYDVKWMRKHLGLVAQEPDLFNRSVRDNIAYGLDHVDGTPVTDEM IIEAAKAANADSFITELEEGYDTVVGARGSKLSGGQRQRVAIARAIVRQP RILVLDEATSALDAVSERVVQEALDRVGKGRTTIAVAHRLSTVKDADAIA VVGRGKILEIGRHEELLRIENGEYANLVKNQLSGGEESGE* back to topmRNA from alignment at NODE_85_length_54060_cov_4.846356:2220..6276+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud7360.t1 ID=Gcaud7360.t1|Name=Gcaud7360.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=4057bp|location=Sequence derived from alignment at NODE_85_length_54060_cov_4.846356:2220..6276+ (Gracilaria caudata M_176_S67 male) ATGGACGGTGACGCCATCCCCGAAACCAACGGGTCTTCCACTCCGCCTGA
TCAGACCAAATCTTCTGACGATCAACAGGGAAAGAAATCTATTTTTGATT
GCTTCAAGAAGAAAGAAAGCGACGACAAGAAGGACTCATCAGAGACACAA
CCCGAACCCTCAAAGCCTCCGCCCGTCAAGTTCCGAGAACTATTTCGATA
TGCGAACCGTACAGAGAAGATATACATTATCATTTCATGCATTTCCGCGA
TAATTCACGGCGCTATACAGCCAATGTTCACCATTCTATTCGGTGGTATT
ATTGATGAATTTCAAGGAACCACTCAAACTCAACCTGATCCATCCATACT
CGATGGAATAACAGATCAGGTTGGCGATGTTGCTAAATGGTTTCTTTTGC
TGGGTGCTGTTGCTTTCGTCACCAGTCTCATACAAGTTCGCTTCCAACTC
ATTGCAGCTCAGCGAATTTGTGCCCGTTTGCGTCGCTTGTATTTCGAATC
GCTTCTGAGCCAGGATTTCACGTGGTATGGACAGGAGGACGGAGGGGAGC
TTACCGCAAGAGTAGCTGGTGATGTGAACTTGATTCAAGCAGGCATCGGT
GACAAGGTCACCAGTGCGGTGCAGTTTATTGCCATGTTCATTGTCGGCTT
TATCGTTGCCTTTATCTATGGGCCTTTGTTGACATTGGTTATGCTCTCCA
TTCTGCCCTTGATGATGGCCGGTGGCGCTGTGTTCGCCAAAATGGCTGCG
GAAAGTACCGGAGAGGGCGTAGGCGCGTATGGTGGTGCTGGCGCCGTTGC
GAGTGaggtcataggtcttattcgtgtcgtcaccgcgtacaacggccagg
aaacggaagcaaagcgatatgaggacgagctacggaaggcatacaaagct
gatgtcaagaagggttttgtcactggtttgggcattgggttcaccatgtt
cgttatcttctgcggatatgccatagccttcacgttcggtgcgaaccgag
ttcgaggtggatccatcaccgctggtgatattctcgttacttttttctcc
gtcttcatcgcgtcgttttctatcgggcaaggtaacgtattcgtcatcaa
caaattcattgcgcggttatacttgtcattgcacatGTTCTGACAAAGAA
TGGGGTTCCTTGTTTCTTTTCTATCTTCTTTTGTTGAAAACAGCGGCACC
GTCTTTCAAAGCCTTTGCTGTGGCACAAGGCGCAGCCCCAAGAGTGTATG
AAGTTATTGGCAGAGAATCTGAAATCAACCCCCTGAACGAGGATGACGGA
GATATTATTATGGACTTCAAGGGAAACGTAAGCTTCAATAACGTAAACTT
CGATTACCAGCACCGGGTTGCTGATGATTTGGAAAGTGACGAAGAAAGGC
GCTTTGTGCTGAATAACTTCACGCTCAACGTTCCATCCggcacgtcccac
gcccttgttggttcatcaggatgtggaaaaagtactactgttcgactcat
tgagcgattttatgatgccaacgacggcgcagttacgctcgatggtgttg
atgtgcggcaactgaatgttaagtggctgagaagccaaatgggctatgtc
ggtcagatgccaacgttgtttgcccgtacaattcgagacaacatcgcttt
gggtgcggctatggaagcggttgtagacgagaatacaggaagGAAGGTGC
TTCGTCGTATGGAGGTCACGGACGAGGACATTGTTCaagcggcgaagaag
gcaaatgcgcacgatttcataatgaagctccctgagaagtatgatacgtt
actgggagaaagaggagcccttctgagtggtggtcaaaagcaacgggtat
gcatagcacgtgcattaatacggaacccgaagattcttatcctggacgaa
gccactgctgcgctggacgctcaatctgagcgaattgtacaaagtgctct
tgaaaaggcggcggctggtcgcactaccataacgatcgcgcacaggttga
gtaccgtgaaggacgcggacgtgatctcagtcatcgacaagggccatatt
gtggaatcaggtacccataatgccctggtggcgattgaagatggcgctta
tcgcactctgatcgaacaccaacgtgtcgaagccctgaaagcgaaggaag
caaaggaaagttcgacggcaacggaggatgtttcgggtccaacgatcgcc
aaggtagctagtacttctatttcccatagcgttcaagtagatggtactgg
tgaacagggtgaagaaggtgcagaaagccccgtggagaagggcattatcg
cccgtgcgtataaggtcaacagaaacgagtggttctacattctgcttggg
atagttggagcagcgctgaacggtgcggctttcccggccatggctatcgt
cttctcagacgttatcgaggagattctgagcgaaaacgacaagggcgaga
tttcgaagtgggcactgctttacgtagcactaggtggagtctctttcctg
ggcaacttcttgcagcactctatgcttgggattagtggagaacgcatgac
gtttaagctaagaagagcttcgttccgagcacttttgaagcaggagatgg
gcttctttgatatgaaggagaactcgcttggtgccctttcgactcggttg
gcaacggaggcgacccaggtgaagggtttgacaggagatgctcttggcac
gattgcgttcggtctcagcactgtgctaaccggtttcttgatcgcctaca
ttgcgtgctggagagtggcgcttgtggttacatgcgtgttcccattgggg
gctatagcacaaatggttcagctgaagatgatgactgggtttgatgcaga
ctctgagactcgttacgcagcggctggaactgtggcatctgaggcggtgg
acaactttgaaacggtgacgtcaattggtgtgcaagacgtgtttatgaac
aagtacaacgaggaaattgataagacaaccaagaacggaagacgaaccgc
tctggtggctggaatcgcttttggtgtgtcggagtttattgcacagatgt
tgtgggcggtgagcttttgggtggggtcgatatttgtgcgcaatggacgt
tgtgatttcgctgagttgatgaaggctgtgactggtcttctcttcggtgg
actgatgcttggcaacctgtcgagtacgatgcccgagtggggaaaggcga
agattgcagggacgaggatcttcagactactggaccgagaatctaagatt
gatccaacagtggaggtggactttaagaagaagattcatggtgacatgcg
gttggaaaaggcgtattttgagtatccgacaaggccgaatgtggcggtgc
ttcgcggaatgtcggtggaggtgaagagcgggcagactctggcattagtt
ggtgcgagtgggTCTGGGAAAAGCACTGTGGTGAGCCTGGTGGAGCGATT
CTACGATGTGCGCAGCGGAAGTTTGCTGATCGATGACAGCAACATTGTGG
AGTACGATGTGAAATGGATGCGCAAGCATCTGGGACTGGTGGCGCAAGAA
CCGGATCTGTTCAACCGCTCGGTGCGCGATAACATCGCGTACGGACTGGA
CCACGTGGATGGCACGCCCGTGACAGACGAAATGATTATTGAGGCGGCTA
AAGCGGCGAATGCTGACTCGTTCATCACGGAACTGGAGGAGGGATACGAC
ACGGTGGTGGGGGCGCGCGGCAGCAAACTGTCCGGCGGACAGCGCCAGCG
GGTGGCGATCGCGCGCGCGATCGTGCGACAGCCGAGAATTCTGGTGCTGG
ACGAGGCTACGTCGGCGCTTGACGCGGTGTCGGAGCGCGTGGTGCAGGAG
GCCTTGGACCGGGTGGGCAAGGGACGCACGACGATTGCTGTGGCTCACCG
TCTGTCGACGGTGAAGGACGCTGACGCGATCGCGGTGGTGGGGCGCGGGA
AGATCTTGGAGATCGGACGACATGAAGAGTTGCTGAGGATTGAGAACGGG
GAGTACGCGAATCTGGTGAAGAACCAATTGAGCGGTGGGGAGGAGAGTGG
GGAGTGA back to topCoding sequence (CDS) from alignment at NODE_85_length_54060_cov_4.846356:2220..6276+ >Gcaud7360.t1 ID=Gcaud7360.t1|Name=Gcaud7360.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=1923bp|location=Sequence derived from alignment at NODE_85_length_54060_cov_4.846356:2220..6276+ (Gracilaria caudata M_176_S67 male) ATGGACGGTGACGCCATCCCCGAAACCAACGGGTCTTCCACTCCGCCTGA TCAGACCAAATCTTCTGACGATCAACAGGGAAAGAAATCTATTTTTGATT GCTTCAAGAAGAAAGAAAGCGACGACAAGAAGGACTCATCAGAGACACAA CCCGAACCCTCAAAGCCTCCGCCCGTCAAGTTCCGAGAACTATTTCGATA TGCGAACCGTACAGAGAAGATATACATTATCATTTCATGCATTTCCGCGA TAATTCACGGCGCTATACAGCCAATGTTCACCATTCTATTCGGTGGTATT ATTGATGAATTTCAAGGAACCACTCAAACTCAACCTGATCCATCCATACT CGATGGAATAACAGATCAGGTTGGCGATGTTGCTAAATGGTTTCTTTTGC TGGGTGCTGTTGCTTTCGTCACCAGTCTCATACAAGTTCGCTTCCAACTC ATTGCAGCTCAGCGAATTTGTGCCCGTTTGCGTCGCTTGTATTTCGAATC GCTTCTGAGCCAGGATTTCACGTGGTATGGACAGGAGGACGGAGGGGAGC TTACCGCAAGAGTAGCTGGTGATGTGAACTTGATTCAAGCAGGCATCGGT GACAAGGTCACCAGTGCGGTGCAGTTTATTGCCATGTTCATTGTCGGCTT TATCGTTGCCTTTATCTATGGGCCTTTGTTGACATTGGTTATGCTCTCCA TTCTGCCCTTGATGATGGCCGGTGGCGCTGTGTTCGCCAAAATGGCTGCG GAAAGTACCGGAGAGGGCGTAGGCGCGTATGGTGGTGCTGGCGCCGTTGC GAGTGaggtcataggtcttattcgtgtcgtcaccgcgtacaacggccagg aaacggaagcaaagcgatatgaggacgagctacggaaggcatacaaagct gatgtcaagaagggttttgtcactggtttgggcattgggttcaccatgtt cgttatcttctgcggatatgccatagccttcacgttcggtgcgaaccgag ttcgaggtggatccatcaccgctggtgatattctcgttacttttttctcc gtcttcatcgcgtcgttttctatcgggcaagCGGCACCGTCTTTCAAAGC CTTTGCTGTGGCACAAGGCGCAGCCCCAAGAGTGTATGAAGTTATTGGCA GAGAATCTGAAATCAACCCCCTGAACGAGGATGACGGAGATATTATTATG GACTTCAAGGGAAACGTAAGCTTCAATAACGTAAACTTCGATTACCAGCA CCGGGTTGCTGATGATTTGGAAAGTGACGAAGAAAGGCGCTTTGTGCTGA ATAACTTCACGCTCAACGTTCCATCCggcacCGGAAGTTTGCTGATCGAT GACAGCAACATTGTGGAGTACGATGTGAAATGGATGCGCAAGCATCTGGG ACTGGTGGCGCAAGAACCGGATCTGTTCAACCGCTCGGTGCGCGATAACA TCGCGTACGGACTGGACCACGTGGATGGCACGCCCGTGACAGACGAAATG ATTATTGAGGCGGCTAAAGCGGCGAATGCTGACTCGTTCATCACGGAACT GGAGGAGGGATACGACACGGTGGTGGGGGCGCGCGGCAGCAAACTGTCCG GCGGACAGCGCCAGCGGGTGGCGATCGCGCGCGCGATCGTGCGACAGCCG AGAATTCTGGTGCTGGACGAGGCTACGTCGGCGCTTGACGCGGTGTCGGA GCGCGTGGTGCAGGAGGCCTTGGACCGGGTGGGCAAGGGACGCACGACGA TTGCTGTGGCTCACCGTCTGTCGACGGTGAAGGACGCTGACGCGATCGCG GTGGTGGGGCGCGGGAAGATCTTGGAGATCGGACGACATGAAGAGTTGCT GAGGATTGAGAACGGGGAGTACGCGAATCTGGTGAAGAACCAATTGAGCG GTGGGGAGGAGAGTGGGGAGTGA back to top
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